Phreatobacter stygius: E8M01_30000
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Entry
E8M01_30000 CDS
T05955
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pstg
Phreatobacter stygius
Pathway
pstg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E8M01_30000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstg03400
]
E8M01_30000
Enzymes [BR:
pstg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
E8M01_30000
DNA repair and recombination proteins [BR:
pstg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E8M01_30000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QCI68093
UniProt:
A0A4D7BBR9
LinkDB
All DBs
Position
complement(6344199..6344837)
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AA seq
212 aa
AA seq
DB search
MTALGPGRDCPLCPRLVGFRDKQRAAHPDWHNAPVPSFGTDDARLLIVGLAPGLQGANKT
GRPFTGDWAGDLLYETLIDFGFATGVYDERPDDGLTLVDARITNAVRCVPPENKPTTEEI
ATCRPFLSATVAAMPRLQAIVALGRIGHDSVVRALGERPSRVGFGHGATHRIGQLTLFDS
YHCSRYNTNTGVLTTAMFRAVFQAVRGHLDAA
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgcttggccccgggcgtgactgcccgctctgccctcgcctggtcgggttccgc
gacaagcagcgcgccgcccatcccgactggcacaatgccccggtgccgtccttcggcacc
gatgatgcacgcctgctgatcgtcggcctggcgcccggcctgcagggcgccaacaagacc
ggccggccgttcaccggcgattgggccggcgacctgctctacgagacgctgatcgatttc
ggcttcgccaccggcgtctatgacgagcggccggatgacggcctgacgctggtcgatgcg
cggatcaccaatgcggtgcgctgcgtgccgccggaaaacaagccgacgaccgaagagatc
gccacctgccggccgtttctgagcgccaccgttgccgccatgccccggctccaggccatc
gtggcgctcggccgtatcggtcatgacagcgtggtcagggcgctcggcgaacggccgtcg
cgggttggcttcggccatggcgcaacccacaggatcggccagctgaccctgttcgatagc
tatcactgctcgcgctacaacacgaataccggcgtgctgacgacggccatgttccgcgcg
gtgttccaggccgtgcgcggccatctcgacgcggcctga
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