Phreatobacter stygius: E8M01_33580
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Entry
E8M01_33580 CDS
T05955
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pstg
Phreatobacter stygius
Pathway
pstg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E8M01_33580 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstg03400
]
E8M01_33580 (uvrA)
DNA repair and recombination proteins [BR:
pstg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E8M01_33580 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E8M01_33580 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_25
DnaJ_CXXCXGXG
BCA_ABC_TP_C
AAA_16
nSTAND1
AAA_21
APS_kinase
DUF4192
Motif
Other DBs
NCBI-ProteinID:
QCI68733
UniProt:
A0A4D7BDZ8
LinkDB
All DBs
Position
7097498..7100419
Genome browser
AA seq
973 aa
AA seq
DB search
MTDLFDKYRDDVRRPDQRVISVRGAREHNLKGVDLTIPRDALVVFTGLSGSGKSSLAFDT
IYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTEI
YDYMRLLWARVGVPYSPATGLPIESQTVSQMVDKTLALPEGSRLYLLAPAVRGRKGEYRK
ELAEYQKKGFQRVKVDGTFYEIADVPPLDKKLKHDIDVVVDRVVVRADMAARLADSFEMA
LKLADGIAIVEFAEGKDAKGEPLRVIFSEKFACPVSGFTISEIEPRLFSFNNPFGACPAC
DGLGVEQTIDADLVIPDKDLSLRKGAIGPWAKSTSPFYTQTLDALAKHYGFSLTAPWRSL
PEKAQTVILFGTGEETVTFKYDDGLRSYETTKTFEGVVRNLERRLKETESEWAREEISRY
VSAVPCKTCGGFRLKPEALAVKIAATHVGEISQLSVRAANEWFATLPPKLTAQQNEIAVR
ILKEIRDRLRFLVDVGLEYLTLGRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIG
LHQRDNERLLGTLKRLRDLGNTVIVVEHDEDAILQADYVVDVGPGAGIHGGRIVAQGTPS
DVMNDPKSLTGKYLTGEMFVPTPKRRKPQKGRALKIVNARGNNLKDVTVEIPLGTFTCIA
GVSGGGKSTLLIDTLYKAVARKLNGASEAPAPHDRIEGIEHLDKVIDIDQSPIGRTPRSN
PATYTGAFTPIREWFAGLPEAKARGYEPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVY
VTCDVCKGKRYNRETLEVVFKGKSIADVLDMTVDEGVEFFKAVPRVRDILKTLSEVGLGY
IHVGQQATTLSGGEAQRVKLSKELARKATGRTLYILDEPTTGLHFHDVAKLLEVLHELVA
QGNSVIVIEHNLEVIKTADWVIDMGPEGGDGGGEVVAMGPPEEIAKEPRSHTGRFLREVL
ARRPIKAKIEAAE
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcttttcgacaagtaccgcgacgacgtgcggcgccccgaccagcgggtgatc
tccgtgcgcggcgcgcgcgagcacaatctgaagggcgtcgacctgaccatcccgcgcgat
gcgctggtggtgttcaccggcctgtccggctcgggcaagtcgtcgctcgccttcgacacg
atctatgccgagggccagcggcgttatgtcgagagcctgtcggcctatgcccgccagttc
ctcgaaatgatgcagaagccggatgtcgaccagatcgacggcctgtcgccggcgatctcg
atcgaacagaagacgacgtcgaagaacccgcgctcgacggtcggcacggtcaccgagatc
tacgactacatgcgcctgctgtgggcgcgggtcggcgtgccctattcgccggccaccggc
ctgccgatcgagagccagacggtcagccagatggtcgacaagaccctggcgctgcccgag
ggctccaggctctatctgctggcgccggcggtgcgcggccgcaagggcgaatatcgcaag
gaactggccgaatatcagaagaagggctttcagcgggtcaaggtcgacggcaccttttac
gagatcgccgacgtgccgccgctcgacaagaagctgaagcacgacatcgacgtggtggtc
gaccgggtggtggtgcgcgccgacatggccgcgcggctcgccgacagcttcgaaatggcg
ctgaagctcgccgacggcatcgccattgtcgaattcgccgaaggcaaggacgccaagggc
gagccgctgcgcgtcatcttctcggaaaagttcgcctgcccggtctccggcttcaccatt
tccgagatcgagccgcggctgttctcgttcaacaacccgttcggcgcctgcccggcctgc
gacggcctgggtgtcgaacagacgatcgacgccgacctggtgatcccggacaaggacctg
agcctgcgcaagggcgcgatcgggccctgggccaagtcgacctcgccattctacacccag
acgctcgatgccctggcgaaacattacggcttctcgctgaccgcgccctggcggtcgctg
cccgagaaggcgcagaccgtgatcctgttcggcaccggcgaagagaccgtcacgttcaaa
tatgacgacgggctgcgctcctacgagaccaccaagaccttcgagggcgtggtccgcaat
ctcgagcggcggctgaaggaaaccgagagcgaatgggcgcgcgaggagatctcgcgttac
gtttcggcggtgccgtgcaagacctgcggcggtttccggctgaagcccgaggcgctggcg
gtgaagatcgcggcgacccatgtcggcgagatctcgcaattgtcggtccgcgccgccaat
gaatggttcgccaccctgccgccgaaactgaccgcgcagcagaacgagatcgccgtccgc
atcctgaaggagatccgcgaccgcctgcgcttcctggtcgatgtcggcctcgaatacctg
accctcgggcgcaattccggcacgctgtcgggtggcgagagccagcgcatccggctcgcc
tcgcagatcggctcgggcctgaccggcgtgctctatgtgctggacgagccgtcgatcggc
ctgcaccagcgcgacaacgagcggctgctcggcacgctgaagcggctgcgcgacctcggc
aacaccgtcatcgtcgtcgaacatgacgaggatgccatcctgcaggccgattatgtcgtc
gatgtcgggccgggcgccggcatccatggtggccgcatcgtcgcccagggcacgccgtcg
gacgtgatgaacgatccgaaatcgctgaccggcaaatatctgaccggcgagatgttcgtg
ccgacgccgaagcggcgcaagccccagaagggccgcgcgctgaagatcgtcaatgcccgc
ggcaacaacctgaaggacgtcacggtcgaaatcccgctcggcaccttcacctgcattgcc
ggcgtctccggcggcggcaagtcgaccttgctgatcgacacgctctacaaggcggtggcg
cgcaaactgaacggcgccagcgaagcccctgccccgcatgaccggatcgagggcatcgag
catctcgacaaggtcatcgacatcgaccagtcgccgatcgggcgcacgccgcgatccaac
ccggcaacctataccggcgccttcacgccgatccgcgaatggttcgccggcctgcccgag
gccaaggcgcgcggttacgagccgggccgcttctcgttcaacgtcaagggcggccgctgc
gaagcctgccagggcgacggcgtcatcaagatcgagatgcacttcctgcccgacgtctac
gtcacctgcgacgtctgcaagggcaagcgctacaaccgcgagacgctggaggtggtgttc
aagggcaagtcgatcgccgacgtgctcgacatgaccgtcgacgagggcgtggaattcttc
aaggcggtgcccagggtgcgcgacatcctgaagacgctgtcggaggtcgggctcggctac
atccatgtcggccagcaggcgacgacgctctcgggcggcgaggcccagcgcgtcaagctg
tcgaaggaactggcgcgcaaggccaccggccgcaccctctacatcctggacgagccgacc
accggcctgcatttccacgatgtcgccaagctcctggaggtgctccacgaactggtcgcc
cagggcaattcggttattgtcatcgagcacaatctggaggtcatcaagaccgccgactgg
gtcatcgacatggggccggagggtggcgacggcggcggcgaggtggtggcgatggggccg
ccggaagagatcgccaaggaaccgcgcagccataccgggcgcttcctgcgcgaggtcctg
gcccgccgtccgataaaggccaagatcgaggcggccgaatag
DBGET
integrated database retrieval system