Puccinia striiformis f. sp. tritici (wheat yellow rust fungus): Pst134EA_022545
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Entry
Pst134EA_022545 CDS
T09520
Name
(RefSeq) hypothetical protein
KO
K14962
COMPASS component SWD2
Organism
pstr
Puccinia striiformis f. sp. tritici (wheat yellow rust fungus)
Pathway
pstr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pstr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Pst134EA_022545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstr03019
]
Pst134EA_022545
03036 Chromosome and associated proteins [BR:
pstr03036
]
Pst134EA_022545
Messenger RNA biogenesis [BR:
pstr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
Pst134EA_022545
Chromosome and associated proteins [BR:
pstr03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
Pst134EA_022545
COMPASS/SET1 complex (yeast)
Pst134EA_022545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
72032064
NCBI-ProteinID:
XP_047801271
LinkDB
All DBs
Position
12:complement(1049636..1052002)
Genome browser
AA seq
385 aa
AA seq
DB search
MSSGQATTSGGPTKVLLTPESMSSLKMAKVFRTHNTAGSSFTSISFDDKGEHLITTAEDE
SLQLFGARNGKHLKQAFSKKYGCSLARFTHKSSAVIHASTKEDDTIRYLSLHDNTYIRYF
KGHKRRVVSLEMSPRDDTVLSGSTDDTVRLWDLRSPSCQGVLNIAGQPCVAFDPSGLVFA
IALNMKQTILLYDLREFDSEPFIAKHIEDPVLARISYPPPPPNLFTSLKFSNDGSKLLVG
TAGDVHYVLDAFNGDILARLEGHQGLGYAPPLDSMFPGQSGSSEETTWTPDSRYVISGSA
DGKVFVWDVQPPKDDPIHAMRAPQSPHATWQPLKVYDGHLGNPSRCVGFNPRLGMLATAA
TELSFWLPGSGGSTNLDQGDVQMNS
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccggtcaagcaaccaccagcggaggcccaaccaaagtgttattgacacctgaa
tcaatgagtagcctgaagatggctaaggtcttcagaacgcacaacaccgctgggtcttcg
ttcacttcaatctcatttgatgataaaggcgagcatctcattacaaccgctgaggatgag
agcttgcaattgtttggtgctcgtaatggaaaacatctaaaacaagccttttccaagaaa
tatggttgctccctcgcccggttcacccacaaatcatcggccgtcattcacgcctcaaca
aaagaagatgacacgattcgatatctttccttacatgataacacgtacatccgatatttc
aaggggcacaaacgaagggttgtctccttggaaatgtccccgcgtgatgatacagtacta
tctggttctactgacgacactgtccgactatgggatctacgttcaccttcatgtcaggga
gttttaaatatcgctggacaaccttgcgtcgcgtttgatccatctggcctagtctttgca
atcgcacttaacatgaaacaaactatcttgctttacgatcttcgagaattcgattctgag
ccattcattgccaagcacattgaagatccagtactcgcgcgtatctcatatccaccgcct
ccaccaaatttgttcacctcgctcaagttttctaacgacgggtcaaagcttctagttggg
acagcaggcgatgttcattacgtattggacgcattcaacggtgatatcctggcgcgactc
gaaggtcaccaaggactgggatatgcgccaccactagactcgatgtttccagggcaatct
ggatcatcagaagagacgacatggacgcctgatagtagatacgttatctctggaagcgca
gatggtaaggtgtttgtttgggatgtacagccacccaaggatgacccgatccatgcgatg
cgtgccccacaaagccctcacgctacttggcagcctttaaaagtttacgatggtcacttg
ggtaatccctcaagatgtgtaggctttaaccctcgtttgggtatgcttgccaccgccgct
actgaactttcattttggttgcccggttcagggggaagtacaaatcttgatcaaggagat
gttcaaatgaattcctga
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