Pantoea stewartii subsp. stewartii: DSJ_06255
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Entry
DSJ_06255 CDS
T04970
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pstw
Pantoea stewartii subsp. stewartii
Pathway
pstw00470
D-Amino acid metabolism
pstw00550
Peptidoglycan biosynthesis
pstw01100
Metabolic pathways
pstw01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pstw00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DSJ_06255 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DSJ_06255 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
DSJ_06255 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pstw01011
]
DSJ_06255 (ddl)
Enzymes [BR:
pstw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
DSJ_06255 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
pstw01011
]
Precursor biosynthesis
Amino acid ligase
DSJ_06255 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
CPSase_L_D2
ATP-grasp_3
GSP_synth
Motif
Other DBs
NCBI-ProteinID:
ARF48982
UniProt:
H3R8J5
LinkDB
All DBs
Position
1292616..1293533
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AA seq
305 aa
AA seq
DB search
MSKVAVLMGGTSAEREVSLMSGAAVLAGLREAGIDAHGIDTREQFVLDLKTQGFDKVFIA
LHGRGGEDGTLQAVLEFLQLPYTGSGVMASAVTMDKLRTKLLWQGRGLPAGKFVWMTRAQ
MQSGLDAATAAAIAALGFPLFVKPSSEGSSVGISRVNQQGDLMAALEEAFRHDDNVLIEA
FLSGEEYTVGILGDQILPAIKIKTASEFYDYEAKYISDDTQYFCPAGLSAEREAELQQLV
WSAWQALGCQGWGRVDVMTDGEGRFQLLEANTSPGMTSHSLVPMAAKQAGLTFSQLVVRI
LELAD
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagtggctgttttgatgggtggcacctcagccgaacgcgaggtctccctgatg
tccggggctgccgtactggccggtttacgtgaagcgggcattgatgcgcacggtattgat
acacgcgagcagtttgtgctggatctgaaaacgcagggcttcgacaaagtctttatcgcg
ctgcatggtcgcggtggcgaagacggcacgcttcaggccgtgcttgaatttctgcaactg
ccttataccggcagcggggtcatggcgtcggcggtgaccatggataagctgcgtaccaaa
ttactgtggcagggcaggggactgccggcaggtaagtttgtctggatgacccgtgcacag
atgcagtcgggtctggacgccgcgacagcggcggcgattgccgcactgggcttccctctg
tttgttaaaccgagcagtgaaggatccagcgttggcatcagccgggttaatcagcagggt
gatctgatggccgcgctggaagaggcatttcgtcacgacgataacgtgcttatcgaggcg
tttctgagtggtgaagaatataccgtgggcattctgggcgatcagattctgccagcgata
aaaataaagactgccagcgagttctatgactatgaagctaaatacatttctgacgatact
cagtacttctgtcccgcagggctgagtgcagagcgtgaagcagaattacaacagctggtg
tggtctgcctggcaggcgctgggatgtcagggttggggtcgtgtcgatgtgatgaccgat
ggtgaaggccgctttcagttgctggaagccaatacttccccgggcatgaccagccacagc
ttagtgccgatggcagcaaagcaggcgggactgaccttttctcaactggtcgtacgcatt
ctggaactggccgactga
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