Pedobacter steynii: BFS30_16520
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Entry
BFS30_16520 CDS
T04469
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
psty
Pedobacter steynii
Pathway
psty03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BFS30_16520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psty03400
]
BFS30_16520
DNA repair and recombination proteins [BR:
psty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BFS30_16520
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BFS30_16520
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_ZnF
RecR_C
HHH_5
HHH
VWA_N2
Motif
Other DBs
NCBI-ProteinID:
AOM78637
UniProt:
A0A1D7QIY9
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All DBs
Position
3943878..3944495
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AA seq
205 aa
AA seq
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MNFSSKLLEDAVNEFSKLPGVGQKTALRLVLHLLNKEQEEVSNFGNAIIKLRQEIKHCAI
CHNISDQQICEICTANKRDKEVICVVEDTRDVMAVENTGQYFGVYHVLGGLISPMDGVGP
SDLFIDSLVQRVATTPVKEVILALSATMEGDTTLFYLYKRLKDFQIPITTIARGIAFGGE
LEYADEITLGRSIVTRVPYENSLIK
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaacttttcttctaaacttcttgaagacgctgtcaatgaattttcaaagttgccagga
gttggacaaaagaccgcattacgtctggtattacacttattaaacaaggagcaggaggag
gtgtcaaacttcggaaatgccatcattaaactcagacaggagatcaagcactgtgcaatt
tgccataacatctccgatcagcagatttgcgaaatatgtactgccaataagcgggataag
gaagtgatttgtgtggtggaggataccagagatgtaatggcagtagagaataccggtcag
tattttggcgtgtaccatgtgctgggtggcctgatctctccaatggatggggtaggtccg
tctgatctttttatcgattcattggtgcaacgtgtagcgactactcctgtaaaagaagtc
atattggcactaagtgcaactatggaaggggatactacacttttctatttatacaaacgc
cttaaggattttcaaataccaattaccactattgcgcgtggaattgcatttggtggcgaa
ctcgaatatgcagatgaaatcaccttaggccgctctatcgttaccagggtgccttatgaa
aactcattaatcaaataa
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