Phytohabitans suffuscus: Psuf_057700
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Entry
Psuf_057700 CDS
T06545
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
psuu
Phytohabitans suffuscus
Brite
KEGG Orthology (KO) [BR:
psuu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Psuf_057700
Enzymes [BR:
psuu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
Psuf_057700
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RGL11_C
CBM_2
RGI_lyase
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
BCB88457
UniProt:
A0A6F8YQN3
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All DBs
Position
6213241..6215496
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AA seq
751 aa
AA seq
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MLTSRRRVALLSATLAGTVAGAGVLAAVVATSASAAAGCRVDYAVASQWQGGFGANVTIT
NLGDPVNGWSLVWSYTAGQTVTQAWNANVTQSGAQVTATNVSYNGSIATNATAAFGFNGS
WNNSSNPVPASFALNGTACTGAVGTPTTGAPPPTTAPPPTTAPPPTTAPPPTTPPPPAGN
AKQMEDLNRGLISVRSGSANLVSWRLLGTEAASTGFNVYRGGTRVNSTPITNSTNYLDSG
AAANASYTVRAVVNGTEQGASEASLSFANGYLDVPIQSPGSGYSANDASVGDLDGDGQYE
IVLKWDPDNAKDNSQAGVTGNVYIDAYRLNGSRMWRIDLGVNIRAGAHYTQFQVYDYDGD
GDAEVAMKTADGSRSGTGQVIGNASANYRNSDGYILSGPEFLTMFDGRTGAVLSTVNYEP
ARGTVSSWGDSYGNRVDRFLAGTAYLDGQRPSLIMARGYYTRAVVVAWDFRNGSLVRRWT
YDSGNSNVGAYGQGNHQLSVADVDNDGRQEIVYGSATIDDNGAFMYRTGFGHGDALHVGD
LVPSRAGVEIFTVHESTSQPAMDIHAGTGQNIWTAPVCGCDNGRGVAGDVYAGNAGAELW
SSGVDGLRSTSGANVGRKPSSANFLIWWDGDPVRELLDQTRIDKYGTSSDTRLLTASGVA
SNNGTKATPALSGDILGDWREEVIWRTSDNSALRIYATPTVTDRRIHTLMHDAQYRVAIA
WQNTAYNQPPHPSFFIGNGMATPPQPNVYLR
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgctcacatccaggcggcgcgtcgcgctgctctccgccacgctcgccggcaccgtggcc
ggcgccggcgtcctcgccgccgtggtcgcgacctccgcgtccgccgccgcgggctgccgg
gtcgactacgccgtagccagccagtggcagggcggcttcggcgccaacgtgaccatcacc
aacctcggcgacccggtcaacggctggtcgctggtctggtcgtacaccgccggccagacc
gtcacccaggcgtggaacgccaacgtcacccagagtggcgcccaggtcaccgcgaccaac
gtgagctacaacgggtcgatcgcgacgaacgcgaccgcggcgttcggcttcaacggctcg
tggaacaacagctccaacccggtaccggcgtcgttcgccctcaacgggacggcctgcacc
ggcgcggtcggcactcccacgacgggggcgccgccgcccacgaccgcgcccccgcccacg
acggcaccgccgccgaccaccgcgccgccgccgaccacgccgccgcctcccgcggggaac
gccaagcagatggaggacctcaaccggggcctgatcagcgtgcgctccgggtcggccaac
ctggtgtcgtggcggctgctgggcaccgaggcggcgagcaccggcttcaacgtctaccgg
ggcggcaccagggtcaactccacccccatcacgaactcgaccaactacctggacagcggg
gcggcggcgaacgcgtcgtacaccgtccgggcggtcgtgaacggcaccgagcagggcgcc
tccgaggcgtcgctctcgttcgccaacgggtacctcgacgtgccgatccagtcgccgggc
agcgggtactccgccaacgacgcctcggtgggcgacctggacggcgacggccagtacgag
atcgtgctcaagtgggacccggacaacgccaaggacaactcgcaggcgggcgtgaccggc
aacgtctacatcgacgcgtaccggctgaacggctcccgcatgtggcggatcgacctgggc
gtcaacatccgcgccggcgcgcactacacccagttccaggtgtacgactacgacggcgac
ggcgacgccgaggtggccatgaagaccgccgacggcagccgctccggcaccggccaggtg
atcggcaacgcgtcggccaactaccgcaactccgacgggtacatcctgagcggtcccgag
ttcctcaccatgttcgacgggcgcaccggcgctgtgctctccaccgtcaactacgagccg
gcgcgcggcacggtctcctcgtggggcgactcgtacggcaaccgggtggaccgcttcctc
gccggcaccgcgtacctggacggccagcgaccttcgttgatcatggcgcgcggctactac
acgcgcgcggtcgtggtggcgtgggacttccgcaacggaagcctggtgcggcggtggacg
tacgactccggcaacagcaacgtcggcgcctacggccagggcaaccaccagctgtccgtc
gcggacgtggacaacgacggccggcaggagatcgtgtacgggtcggcgacgatcgacgac
aacggcgcgttcatgtaccgcaccgggttcgggcacggtgacgcactgcacgtcggcgac
cttgtaccgtcacgggccggcgtcgagatcttcaccgtgcacgagtcgaccagccagccg
gcgatggacatccacgccggtaccgggcagaacatctggaccgcgccggtctgcggctgc
gacaacggccggggcgtggccggcgacgtctacgccggcaacgcgggcgcggagctgtgg
tcgtccggcgtcgacgggctgcgcagcaccagcggcgcgaacgtcgggcgcaagccgtcg
tcggcgaacttcctgatctggtgggacggcgacccggtccgcgagctgctcgaccagacc
cggatcgacaagtacggcacctcgtcggacacccggctgctgaccgcctcgggcgtggcg
tcgaacaacggcaccaaggccaccccggcgctgtccggcgacatcctgggcgactggcgc
gaggaggtcatctggcgcacctccgacaactcggcgctgcggatctacgccacgccgacc
gtcaccgaccggcggatccacacgctgatgcacgacgcgcagtaccgggtcgcgatcgcg
tggcagaacaccgcgtacaaccagccgccgcacccgagcttcttcatcgggaacgggatg
gcgacgccgccccagccgaacgtctacctgcggtag
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