Pseudoxanthomonas suwonensis J1: WQ53_03785
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Entry
WQ53_03785 CDS
T04241
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
psuw
Pseudoxanthomonas suwonensis J1
Pathway
psuw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psuw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WQ53_03785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psuw03021
]
WQ53_03785
03400 DNA repair and recombination proteins [BR:
psuw03400
]
WQ53_03785
Enzymes [BR:
psuw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WQ53_03785
Transcription machinery [BR:
psuw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WQ53_03785
DNA repair and recombination proteins [BR:
psuw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WQ53_03785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AKC86022
UniProt:
A0A0E3Z0F2
LinkDB
All DBs
Position
complement(864955..869166)
Genome browser
AA seq
1403 aa
AA seq
DB search
MKDLLNLFNQQRQTLDFDAIKIALASPDLIRSWSFGEVKKPETINYRTFKPERDGLFCAA
IFGPIKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRERMGHIDLASPVAHIWFLKSL
PSRIGLMLDMTLRDIERILYFEAYVVTEPGLTPLERRQLLNEEQYLTARQEHGDDFDAAM
GAEAVYELLRTIDLQAEMARLREEIAATGSETKLKRLTKRIKLIEAFIESGNRPEWMVMT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLRRLLELNAPDIIVRNEKRMLQ
ESVDALMDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPY
LRLHQCGLPKKMALELFKPFVFAKLQRRGLATTIKAAKKLVEREEAEVWDILEEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRALENKKGEGMAFANVAEVKRAYDNR
VVELHAKVKVRIAETVTDEEGNREKKVSIVDTTVGRALLAEILPEGLPFALANTELNKKA
ISRLINSCYRQLGLKDTVVFADQLMYTGFAYATRAGVSIGIDDMLIPQEKKGILTEAEAE
VLEIQEQYQSGLVTAGERYNKVVDIWSRTNERIAKAMMDTIGTDKVVNAKGEAIAQKSMN
SLYIMADSGARGSQAQIRQLAGMRGLMARPDGSIIETPIKANFREGLNVQEYFNSTHGAR
KGLADTALKTANSGYLTRRLVDVAQDVVITEPDCGTSQGLTMTPIVEGGDVVEPLRDRVL
GRVVTEDVFLPGNDEDPIVTRNTLLDEGWVQKLEDAGVQSIKVRSTITCESSFGVCSQCY
GRDLARGHIVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAVDNITVKTTGSVK
FSNLKSVEHSAGHLVAVSRSGEISVLDPHGRERERYKLPYGATITVKDGAEVKAGQSVAN
WDPHNHPIVSEVAGSIRFIDFIDGVTVIEKTDELTGLASREITDPKRRGTQGKDLRPLVR
IVDKDGKDLTIPGTDLPAQYLLPPRSLVNLQDGAPVGVGDVVAKIPQEASKTRDITGGLP
RVADLFEARKPKDPAILAERSGVVSFGKDTKGKQRLIIKDNEGGEHEELIPKYRQIIVFE
GEHVTKGETVVDGEPSPQDILRLLGIEPLAAYLVKEIQDVYRLQGVKINDKHIEVITRQM
LRKVEIADQGDSKFLNGEQVERQRVIEENARLVGRKELPAKFDPVLLGITKASLATESFI
SAASFQETTRVLTEAAVRGTRDSLRGLKENVIVGRLIPAGTGLAYHSQRRRTSTGLTEAE
MDALSGGSEPAAAEVAAEGASEE
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacctgctcaacctcttcaaccagcagcgccagacgctggacttcgacgcgatc
aagatcgcgctggcttcgccggacctgatccgttcgtggtccttcggcgaggtgaagaag
ccggagacgatcaactaccgcaccttcaagcccgagcgcgacggcctgttctgcgccgcc
atcttcggcccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcatgaagcac
cgtggcgtggtctgcgagaagtgcggcaccgaggtcaccctggccaaggtgcgccgtgag
cgcatgggccacatcgacctggcctcgccggtggcgcatatctggttcctgaagtcgctg
ccgtcgcgcatcggcttgatgctggacatgaccctgcgcgacatcgagcgcatcctgtac
ttcgaagcctacgtggtgaccgagccgggcctgaccccgctcgagcgccgccagctgctg
aacgaagagcagtaccttaccgcgcgccaggagcatggcgatgacttcgacgccgcgatg
ggtgccgaggccgtgtacgagctgctgcgcacgatcgacctgcaggccgagatggcccgc
ctgcgcgaggaaatcgcggcgaccggttcggagaccaagctcaagcgcctgaccaagcgg
atcaagctgatcgaggcgttcatcgagtccggcaaccgcccggagtggatggtcatgacc
gtgctgccggtgctgccgccggacctgcgcccgctcgtcccgctggacggcggccgcttc
gcgacctccgacctgaacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctgcgc
cgcctgctggagctcaatgcgcccgacatcatcgtgcgcaacgagaagcgcatgctgcag
gagtccgttgacgccctgatggacaacggccgccgcggccgcgccatcaccggcaccaac
aagcgcccgctcaagtcgctggccgacatgatcaagggcaagcagggccgcttccgccag
aacctgctgggcaagcgcgtcgactactcgggccgttcggtcatcgtggtcggcccgtac
ctgcgcctgcaccagtgcggcctgccgaagaagatggcgctggagctgttcaagccgttc
gtgttcgccaagctgcagcgtcgcggcctggccaccacgatcaaggccgccaagaagctg
gtcgagcgcgaagaggccgaggtgtgggacatcctcgaagaggtgatccgcgagcacccg
gtgctgctgaaccgcgccccgaccctgcaccgcctgggcatccaggcgttcgagccggtg
ctgatcgagggcaaggcgatccagctgcacccgctggtctgcaccgcgttcaacgccgac
ttcgacggtgaccagatggccgtgcacgtcccgctgagcctcgaggcccagctggaagcg
cgcgcgctgatgatgtcgaccaacaacatcctctcgcccgccaacggcgagccgatcatc
gtgccgtcgcaggacgtggtgctcggcctgtactacatgacccgcgccctggagaacaag
aagggcgagggcatggcgttcgccaacgtcgccgaggtcaagcgcgcctacgacaaccgc
gtggtcgagctgcacgccaaggtcaaggtccgcatcgccgagaccgtgaccgacgaggaa
ggcaaccgggagaagaaggtctcgatcgtggacaccacggtcggccgcgcgctgctggcc
gagatcctgccggagggcctgccgttcgcgctggccaacaccgagctgaacaagaaggcg
atctcgcgcctgatcaactcctgctaccgccagctgggcctgaaggacaccgtggtgttc
gccgaccagctgatgtacaccggcttcgcctacgcgacccgcgccggcgtgtcgatcggc
atcgacgacatgctgatcccgcaggagaagaagggcatcctgaccgaggccgaggccgag
gtgctggagatccaggagcagtaccagagcggcctggtcaccgccggcgaacgctacaac
aaggtggtcgacatctggtcgcgcaccaacgagcgcatcgccaaggcgatgatggacacc
atcggcaccgacaaggtggtcaacgccaagggcgaggccatcgcccagaagtcgatgaac
tcgctgtacatcatggccgactccggcgcccgtggttcgcaggcgcagatccgccagctg
gccggcatgcgcggcctgatggcgcgtccggacggctcgatcatcgagacgccgatcaag
gccaacttccgcgaaggcctgaacgtgcaggagtacttcaactccacccacggcgcgcga
aagggcctggccgataccgcgctgaagaccgccaactccggttacctgacccgtcgcctg
gtcgacgtggcccaggacgtggtgatcaccgagccggattgcggaacctcgcagggcctg
accatgaccccgatcgtggaaggcggcgacgtggtcgagccgctgcgtgaccgcgtgttg
ggtcgcgtcgtgaccgaggacgtgttcctgccgggcaacgacgaggatccgatcgtcacc
cgcaacaccctgctggacgaaggctgggtgcagaagctggaagacgccggcgtgcagtcg
atcaaggtgcgttccaccatcacctgtgaatcgtccttcggcgtgtgctcgcagtgctac
ggccgcgacctggcccgtggccacatcgtcaacatcggcgaagcggtcggcgtgatcgcc
gcgcagtcgatcggcgagcccggtacccagctgaccatgcgtaccttccacatcggcggc
gcggcttcgcgtgcggcggcggtggacaacatcacggtcaagaccaccggctcggtgaag
ttcagcaacctcaagtcggtcgagcactcggccggccacctggtcgcggtgtcgcgttcg
ggcgagatctccgtgctcgacccgcacggccgcgagcgcgagcgctacaagctgccgtac
ggcgcgaccatcaccgtcaaggacggcgccgaggtcaaggccggccagtcggtcgccaac
tgggatccgcacaaccacccgatcgtctcggaagtggccggctccatccgcttcatcgac
ttcatcgacggcgtcaccgtcatcgagaagaccgacgagctcaccggcctggcctcgcgc
gagatcaccgatcccaagcgtcgcggcacccagggcaaggacctgcgtccgctggtccgc
atcgtcgacaaggacggcaaggacctgaccatcccgggtaccgacctgccggcgcagtac
ctgctgccgccgcgctcgctggtcaacctgcaggacggcgcgccggtcggcgtgggcgac
gtggtcgccaagatcccgcaggaagcctccaagacccgcgacatcaccggcggcctgccg
cgcgtggccgacctgttcgaggcgcgcaagccgaaggatccggcgatcctggccgagcgc
tcgggcgtggtcagcttcggcaaggacaccaagggcaagcagcgcctgatcatcaaggac
aacgagggcggcgagcacgaggagctgatcccgaagtaccgccagatcatcgtgttcgag
ggcgagcacgtgaccaagggcgagaccgtggtggacggcgagccgagcccgcaggacatc
ctgcgcctgctgggcatcgagccgctggccgcgtacctggtcaaggagatccaggacgtg
taccgcctgcagggcgtgaagatcaacgacaagcacatcgaggtcatcacccggcagatg
ctgcgcaaggtcgagatcgccgaccagggcgacagcaagttcctcaacggcgagcaggtc
gaacgccagcgcgtcatcgaggagaacgcccgcctggtcggtcgcaaggagctgccggcg
aagttcgatccggtgctgctgggcatcaccaaggcctcgctggcgaccgagtcgttcatc
tccgcggcctccttccaggagaccacccgcgtgctgaccgaggcggccgtccgcggcacc
cgcgacagcctgcgcggcctgaaggagaacgtgatcgtcggccgcctgatcccggccggt
accggcctggcgtaccacagccagcgccgccgcacgtccactggtctcaccgaggctgag
atggacgcgctgtccggcggttccgagccggccgcggccgaggtggctgccgagggcgcg
tccgaggagtaa
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integrated database retrieval system
