KEGG   Pseudomonas sp. VLB120: PVLB_00765
Entry
PVLB_00765        CDS       T02897                                 
Name
(GenBank) two component sigma-54 specific Fis family transcriptional regulator
  KO
K11384  two-component system, NtrC family, response regulator AlgB
Organism
psv  Pseudomonas sp. VLB120
Pathway
psv02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psv00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PVLB_00765
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:psv02022]
    PVLB_00765
Two-component system [BR:psv02022]
 NtrC family
  KinB-AlgB (alginate production)
   PVLB_00765
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 Mg_chelatase AAA VpsR cREC_REC AAA_22 HTH_23 AAA_16 AAA_2 AAA_19 HTH_29 MCM HTH_50 Xre-like-HTH nSTAND3
Other DBs
NCBI-ProteinID: AGZ32963
UniProt: A0AA86A8D4
LinkDB
Position
complement(161129..162475)
AA seq 448 aa
MESAQDTQGRILLVDDESAILRTFRYCLEDEGYSVSTASSAAQAEALLQRQVFDLCFLDL
RLGDDNGLDVLAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLAT
AKQLEVRQLSARLEALEGEVRKPKDGLDSHSPAMMAVLETARQVATTDANILILGESGTG
KGELARAIHGWSKRARKACVTINCPSLNAELMESELFGHTRGAFTGASESTLGRVSQADG
GTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEEMVRESRF
REDLLYRLNVITLHLPPLRERSEDILTLAERFLARFVKEYSRPARGFSEQARTALLNYRW
PGNIRELRNVVERASIICPQEWVEMSHLGMGEQPAGNTPRIGAALSLDELERAHIGAVLA
TSDTLDQAAKTLGIDASTLYRKRKQYNL
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggagtcagcccaggacacccaaggccgcattctgctggtggatgatgagtccgctatc
ctgcgtacattccgctattgcctcgaggacgaaggctacagcgtgtccaccgcaagcagc
gccgcccaggccgaagccttgcttcagcgccaggtgttcgacctgtgcttcctggatttg
cgcctgggcgatgacaacggcctggacgtactggcccagatgcgcatccaagcgccgtgg
atgcgggtggtgatcgtcaccgctcattccgcggtcgacacggcggtggacgccattcag
gccggggctgccgactatctggtcaagccctgcagccccgaccagttgcgcctggccacg
gccaaacaactggaagtgcgccagctgtcggcgcggctggaagccctcgaaggcgaagta
cgcaaaccaaaggacgggctggattcgcacagcccggcgatgatggctgtcctggagact
gcccgccaagtcgccaccaccgatgccaatatcctgattctgggagaatcgggcaccggc
aagggcgaactggcccgggcgattcatggttggagcaagcgggcacgcaaggcatgcgtc
accatcaactgcccatcactgaacgccgagctgatggaaagcgaactgttcggccatacc
cgtggtgccttcaccggcgccagcgagagcacattggggcgcgtcagccaggccgatggc
ggtacgctgttcctcgacgagatcggcgatttcccgctgaccctgcaacccaagctgctg
cgtttcatccaggataaggaatacgagcgggtaggcgatccggtcacccggcgagccgac
gtacggattctcgcggccaccaacctgaacctggaagaaatggtgcgcgaaagccgtttc
cgcgaagacctgctgtaccgtctcaacgtcatcacgttgcacctgccacctctgcgggag
cgcagcgaggatatcctgaccctggccgagcgcttcctggcccgcttcgtcaaggaatac
tcccgccccgccagaggcttcagtgagcaagctcgcactgcgttgctcaattaccgatgg
ccgggcaacatccgcgaactgcgtaacgtggtggagcgggccagcatcatctgcccgcag
gagtgggtggaaatgagccacctgggaatgggtgaacaacctgcaggcaacacccctcgg
atcggcgcggccctcagtctggatgagctggagcgcgcccacatcggcgcggtgctggcc
accagcgatacgctggaccaagccgccaagaccttgggtatcgatgcctccaccctgtac
cgcaagcgtaagcagtacaacttatga

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