Pseudomonas sp. VLB120: PVLB_05090
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Entry
PVLB_05090 CDS
T02897
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PVLB_05090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psv03400
]
PVLB_05090
Enzymes [BR:
psv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PVLB_05090
DNA repair and recombination proteins [BR:
psv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PVLB_05090
Prokaryotic type
PVLB_05090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AGZ33825
UniProt:
A0AA86ABX1
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All DBs
Position
1156226..1156918
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AA seq
230 aa
AA seq
DB search
MTDDDRIKLEPSWKAALRGEFDQPYMHQLREFLRQEYAAGKEIYPPGPLIFNALNSTPLE
QVKVVILGQDPYHGPGQAHGLCFSVQPGVPTPPSLVNIYKELQRDLNIAIPDHGYLQSWA
EQGVLLLNTTMTVERANAASHAKKGWEFFTDRIIQVVSEQCPNVVFLLWGAHAQSKQKLI
DGTKHLVLKSVHPSPLSAYRGFFGCGHFSRANSFLEQRGLVPINWALPPL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgacgatcgcatcaaactcgaacccagctggaaagccgcattgcgtggcgaa
ttcgaccagccctacatgcaccagctgcgcgagttcctgcgccaggagtacgcggccggc
aaggaaatctacccaccggggccgctgatcttcaatgcgctcaactccaccccgctggag
caggtcaaagtggtcattctcggccaggatccttaccacggcccaggccaggcccatggt
ctgtgtttctcggtgcagccgggcgtgccgacaccaccgtcactggtcaacatctacaag
gaactgcaacgcgacctgaacatcgccatccctgatcacggctatctgcaaagctgggcc
gagcagggcgtgctgctgctcaacaccaccatgaccgtggagcgtgcgaacgcggcttcg
catgccaagaaaggctgggagttcttcaccgaccgcatcattcaggtggtgagcgagcag
tgcccgaatgtggtgttcctgctgtggggcgcgcatgcccagagcaagcagaagctgatc
gacggtaccaagcatctggtgctcaagtcggtgcatccgtcgccgttgtcggcctatcgc
ggtttctttgggtgtgggcatttcagtcgggccaacagcttccttgagcagcgagggttg
gtgccgatcaactgggccttgccgccactttga
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