Pseudoliparis swirei (Mariana hadal snailfish): 130199090
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Entry
130199090 CDS
T09868
Symbol
asxl1
Name
(RefSeq) putative Polycomb group protein ASXL1
KO
K11471
additional sex combs-like protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130199090 (asxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130199090 (asxl1)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
130199090 (asxl1)
BRITE hierarchy
Motif
Pfam:
ASXH
PHD_3
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
130199090
NCBI-ProteinID:
XP_056278279
LinkDB
All DBs
Position
9:complement(1123246..1148742)
Genome browser
AA seq
1513 aa
AA seq
DB search
MKDKQKRKKERTWAEAARMVLENFSDAPMTPKQILHVIQTKGLKEMRSGTAPLACLVTML
HSQVRGDRVKDSIFFKLPGRMSLFTLKKNALQWTKTTSESETPAESTSSAAAASASSSAA
AASSVDAGEQESCDSTEITASGDNDASVDESSSSASCSAEPPPPPTSQPQTRLSRAAGLQ
GRTESQQQQAQHAQTRLSRSRQSGRQRKKAVMMPRVVLTPLKVNGEHVPSGPMKRSRGGV
DVDFETPGSILVNTNIRALINVRTFSAFPSHSQQQLLQLLPEVDRQIGPDSMARLSSSAL
NNEFFTHASQSWKERLAEGEFTHEMQVRFRQEMEKEKKVEAWKEKFFEEYHGQKSGLTRE
ESLKLTMSEAGEAAAGEAAAASGAPKRRSVGRRRRDGRLRRRTRADLRRRARRTLCKATP
PAPQSADAAEAPDSPAASVGSPVSAAAAGEVELQAEAGVELESAAAEPKPPATPEPSPTR
TPTPTTPTPTTPTTPTTPTTPTPTTPTPTTPTPTPTTPTPTTPTPTPTTPTPTPTTPTPT
AATAAATATPTATATPTPTPTHSPTPTPTHSPTPTPTHSPTPTPTHSPTPTHSPASNSAN
EEPEEPDAAARLLPEEAPPELASTSSPSSSSSSSSSSSSSSSSSSSSSASSPVSSPSSPS
GRRGAFAAGLDFSSSSSASSSGVAADPLDDAASAVTGGTATSSRDSSPSASPASTPLPAA
QPKEQKRRPDETPAFSSFPEKRPRLDDRQSFRTTIDGVRAEKPQPTAEEPKVPPIRIQLS
RIKPPWVKGHPTYQICPRIVPPGEGSRRSGTGGARTLADIKARAQQARAQREAAAAVAAA
GEGAGPAGGGRLRPPAGLPDSSNGRRAREHPGPVEPGGGGGGGGGGGGPGGGGGGGLEEP
GPSAGADPSGAQLQRLPVDPPGAPQGAGGSAGGAAAPEEPTSAVELTDEASPSPKPEAPE
AAAPPSETADPGSEKASLAPTSIPDSLPRFGAQGVDVIQTLSSSCKSKEVQGKEAGSGGV
IQHGSYHVEAQEAFPRPAASPRHADSGGEKDDEAATHSDSTETASDCENDLQEDELQPAD
EDWAPRGCGAKRNGPLVICGPPPQNQQPVIQAHVSAGRHGQTVIQPCFPNGLPQYQNHHG
LRDATVKAETGSSPGSAEEEGRSKPKRPAGAARPVSSVEANNPLVTQLLQGSLALETVLP
PHPANRLEISRLQGPRAAAARTPGPRGRPEAPPPGPDLRAASGPVSCVKEAPQYGAVPVI
TSLPPSSSSSSSSSAAVQNAHGSTPSPGVAPAHRPTPNGPSPSCADPCPPEAVPTIKINW
RPSHPQPRLLHHVAAVVKIEAGARPPCQALAKSCPVKPTGATKKEAGGSGDGYLSGGAME
GLLNMEMTLARMAKKEHGKASYSSSPAPSALPFQLYGKFPKHGGVSYTANVSVMDNGGFS
RSVADGVLQLRPRLTSGQTTLSIQAFTDGSADEVALKCSCRLKAMIMCQGCGAFCHDDCI
GPSKLCVSCLVVR
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacaaacagaagaggaagaaggagcggacctgggctgaggcggctcgcatggtt
ttggagaacttctctgatgctccaatgacccccaaacaaatcctccacgtcatccagacc
aaggggctgaaggagatgaggagtggcaccgccccactggcctgcctggtcaccatgctg
cactcccaggtgcggggcgaccgagtgaaggacagcatcttcttcaagctcccaggccgg
atgagcctcttcactctcaagaaaaacgccctccagtggacgaagaccacgtcggagtcg
gagactccggccgagtcgaccagcagcgccgccgccgcctcggcttccagcagcgcggcg
gcggcgtcctcggtcgacgccggtgaacaggaaagctgcgactccacggagatcaccgcc
agtggagacaacgacgcctcggtggacgagagctcgtccagcgcctcctgctccgcggag
cctccccccccgcccacctctcagccccagacccgcctcagcagggcggcaggactccaa
ggccgcacagagagccagcagcagcaggcccagcacgcccagacccggctgagccgctcc
agacagtcagggcggcagaggaagaaagccgtgatgatgcctcgcgtcgtcctcacgcct
ctgaaggtcaacggggagcacgtcccctcagggcccatgaagaggagtcggggaggggtg
gatgtggactttgagactccgggctccatcctggtcaacaccaacatcagagcgctcatc
aacgtgaggaccttctcggccttcccctcgcactcgcagcagcagctgctgcagctcctg
ccagaggtggaccggcagatcggacccgactccatggctcgactgagcagctcggccctc
aacaacgagttcttcacccacgcctcccagagctggaaggagaggctggccgagggggag
ttcacccacgagatgcaggtccgcttccgccaggaaatggagaaggagaagaaggtggag
gcgtggaaggagaagttctttgaagagtaccacgggcaaaagtctggtctgacccgagag
gagtccctgaagctcaccatgagcgaagccggtgaggcggcggccggcgaggcggcggcg
gcctccggcgcgcccaagagacgcagcgtgggccggaggaggagagacggccgcctgagg
aggcgcacgcgggccgacctgcggcggcgggcgcgccggaccctctgcaaggccacgccc
ccggcgccgcagtctgcggacgcggccgaggccccggacagcccggcggcctccgtcggc
tcccccgtgtccgccgccgccgccggggaggtggagctgcaggccgaggccggcgtggag
ctggagagcgccgccgcggagccaaagccccccgccacgccagagcccagccccacccgc
acccccacacccactacacctacacccactacacccactacacccactacacccactaca
cccacacccactacacctacacccactacacctacacccacacccactacacctacaccc
actacacctacacctacacccactacacctacacctacacccactacacctacacctact
gctgctactgctgctgctaccgctactcccacagctactgcaactcctacccccacaccc
acccacagccccacccccacacccacccacagccccacccccacacccactcacagcccc
acccccacacccactcacagccccacaccaacccacagtccagcctccaacagcgcaaac
gaggagcctgaggagcccgacgccgcggcccgcctgctcccagaggaagctccgccggaa
ctggcgtccacctcctcgccgtcttcttcctcctcctcctcctcctcctcttcctcctcc
tcctcctcctcctcttcttcgtccgcctcctcgccggtgtcctccccctcctcgccgtct
ggcagacggggagcgttcgccgcgggcctggacttctcttcgtcctcttcggcgtcctcc
tccggcgtcgccgccgacccgctggacgacgccgcctccgcggtcaccggcggcaccgcc
accagcagccgcgacagcagcccctccgccagcccggcctccacccctctgcccgccgcc
cagcccaaggagcagaagaggaggcccgacgagactccggccttctccagcttccccgaa
aagaggccgcggcttgacgaccgccagtcctttcgtaccacaatcgacggcgtccgcgcg
gagaagccgcagccgaccgcagaggagcccaaggtgccgcccatccggattcaactgtcc
agaatcaaaccgccctgggtcaaaggtcaccccacctaccaaatctgcccccgcatcgtg
ccccccggcgaaggctcgcggcggtcggggacggggggggcgcgcaccctggcggacatc
aaagcccgggcccagcaagcccgggcccagcgcgaggccgctgctgctgttgcagccgct
ggcgagggggcagggccggcgggcggcggccggctgcggcctcctgctgggctaccggat
agcagcaatggacgacgagcgcgagagcatccgggccccgtcgagcccggaggaggagga
ggaggaggaggaggaggaggaggaccgggaggagggggaggtggtgggctggaggagccg
ggaccgtctgcaggcgcggatccgtctggagcacaactacagcgcctccctgtagacccg
ccgggggctccgcagggggccgggggctccgcagggggggcggcggctccggaggaaccc
acgtcggccgttgagctcacagacgaggcgtcgccctcgccgaagccagaggcgcccgag
gccgccgcccccccatcggagacggccgacccgggttctgagaaggcgtccctggctccg
acctccatccccgactcgctgccccggttcggggcgcagggcgtggacgtcatccagacg
ctgtccagctcctgcaagtccaaagaggtccaagggaaggaggcggggtcgggcggcgtg
atccagcacggctcctaccacgtggaggcccaggaggcgttcccccgcccggccgcctcc
ccccgacacgccgactccggcggggagaaggacgacgaggcggcgacgcacagcgactcc
acggagacggcgtcggactgcgagaacgacctccaggaggacgagctgcagccggccgac
gaggactgggccccgcgggggtgcggagccaagaggaacggcccgctggtcatctgtggc
cctcctcctcagaaccagcagccggtcatccaggcccacgtgtccgccggccgccacggg
cagaccgtcatccagccgtgcttccccaacggcctgcctcagtaccagaaccaccacggg
ctccgggacgccacggtcaaggcagagaccgggtcctctccgggctccgccgaagaggag
ggtcgctcgaaacccaagaggccggccggcgccgccaggcctgtgtccagcgtggaggcc
aacaacccgctggtcacccagctgctgcagggcagcctggcgctggagacggttctgccc
ccccaccccgccaaccggctggagatcagccggctgcaggggccccgagccgcggccgcc
cggaccccagggccccgcggccggcccgaggccccgcctcccggcccggacctgagggcg
gcctccggcccggtgtcctgtgtgaaggaggcgccgcagtacggggcggtgccggtcatc
acctccctgcccccctcctcctcctcctcctcctcctcctctgcagccgttcagaacgct
cacggctccacgccctccccgggggtcgctccggcccaccggcccacacccaacggcccc
tccccttcctgtgcggacccgtgtcccccggaggcggtgccaaccatcaagatcaactgg
cggccctcgcaccctcagccccgcctcctgcaccacgtggcggccgtggtgaagatcgag
gcgggcgcgcggccgccctgccaggcgctcgccaaatcgtgccccgtcaaacccacgggc
gccaccaagaaggaggcgggcggctcgggggacggctacctgagcgggggggcgatggag
ggcctcctcaacatggagatgactttggcccgcatggcgaagaaggagcacggcaaggcg
tcctactcgtcctcgcccgccccctccgcgctccccttccagctgtacggcaagttcccc
aagcacggcggcgtgagctacactgccaacgtgtccgtgatggacaacggcggcttctcc
cgcagcgtggcggacggcgtgctgcagctgcggccgcgcctgacctcgggtcagaccacg
ctgagcatccaggccttcacggacggctcggcggacgaggtggcgctcaagtgctcgtgc
cgcctcaaagccatgatcatgtgccagggctgcggcgccttctgccacgacgactgcatc
gggccctccaaactgtgcgtgtcgtgcctggtggtgaggtag
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