Paenibacillus swuensis: SY83_12930 Help Entry SY83_12930        CDS       T04884                                  Name (GenBank) hypothetical protein   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism pswu  Paenibacillus swuensis Pathway pswu03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:pswu00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     SY83_12930  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pswu03400]     SY83_12930 Enzymes [BR:pswu01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      SY83_12930 DNA repair and recombination proteins [BR:pswu03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      SY83_12930 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_C RseA_C Motif Other DBs NCBI-ProteinID:  ANE47022 UniProt:  A0A172TJ82 LinkDB All DBs Position complement(2931370..2932278) Genome browser AA seq 302 aa AA seqDB search MIPLPGNPMAPILQEAIPEGDDWGYQIKWDGVRLLSAVGNGKVDLYSRKMLLKNSVYPEV AQRLSSLKGELLLDGEAVVIDPVLQRPVFQKVLQRERTRSATGIKDMMERSPVVYVLFDL LYEDGEDLRKLPYAERHQRLLARFPDKHPNLLVSDLFHDGAALWNWVSTNGWEGIVSKRL SGSYKEGKKHKDWFKKKITVNLTVDIVGVTVREGQVASLVMAVDGVYFGRVSLGLNVGHK RRIMQYIQDHPLDQRPFHALPADLKGETVLWTSQPFPCPVTGLEITSAGLLRHPQIVKVP EV NT seq 909 nt NT seq  +upstreamnt  +downstreamnt atgattccattgcccggaaacccgatggctccgatccttcaggaagccattcctgaagga gacgactgggggtatcaaatcaagtgggacggagttcggttactgtccgccgtggggaac ggcaaagtcgatctctattcccggaagatgttgcttaaaaattccgtgtatcctgaagtg gcgcagcgcctctcttccctgaagggagagcttcttctggacggggaagcggtcgtcatt gatcctgtgctgcaacgtcctgtcttccagaaggtgctccaacgggaacgtacccgctcc gccacaggaatcaaggacatgatggaacgcagtcccgtcgtttatgtcctgttcgacttg ctttacgaagatggcgaggatctgcggaagcttccttacgccgagcgccatcaacgtctg cttgcccggtttccggacaagcatccgaatctgttggtgagcgatttattccatgacggg gccgccctatggaactgggtcagcaccaacggctgggaaggcatcgtcagcaagcggctg tccggttcttataaagaagggaagaaacacaaggattggtttaagaagaaaattacggtg aacttgacggtggatattgtcggcgtcacggtgcgggaaggtcaagtcgcaagtctggtc atggctgtcgacggtgtttatttcggacgcgtatcgctgggtctgaatgtaggccataaa aggagaatcatgcagtatatccaggaccatcccttggatcaacggccctttcacgcttta cctgccgatctgaaaggggaaacggtgctatggacaagccaacctttcccttgcccggtt accggattggaaattacatcggccggactgctccgccaccctcaaatcgttaaagtacct gaagtttag

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