Psychrosphaera ytuae: J1N51_12355
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Entry
J1N51_12355 CDS
T07123
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
psym
Psychrosphaera ytuae
Brite
KEGG Orthology (KO) [BR:
psym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psym03009
]
J1N51_12355 (srmB)
Enzymes [BR:
psym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J1N51_12355 (srmB)
Ribosome biogenesis [BR:
psym03009
]
Prokaryotic type
rRNA helicases
J1N51_12355 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
PhoH
Motif
Other DBs
NCBI-ProteinID:
QTH63507
UniProt:
A0A975HHV5
LinkDB
All DBs
Position
2776962..2778185
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AA seq
407 aa
AA seq
DB search
MSFSEFDLDRRLEKGISSLGYKKPTRVQQSAIPEALDGLDILASAPTGTGKTAAFLIPAI
QYLLDFPRNAPGFARVLVLAPTRELAYQIHEVAEALCSSTDLKIGVITGGINYGSHKDIL
EKNNDILISTPGRLLEYMDAESFHCENVEILVLDEADRMLDMGFRSFMTRIAEESRNRKQ
TMLFSATLEGRGIIEFSQGVLTEAARIDEDAPRRERGKIVQWTHLADDYDHKFAQLLHYL
QSEDVQKSIVFVKTRERLDQLVQRLQGHEIYATYLQGEMPQDRRMKAIDKMKNGRSKVLV
ATDVAARGLDITDITHVFNFDMPRTADVYVHRIGRTARAGAKGYAVSFVEAHDMGILKKI
ESYTKQTFKHRKIKGLEPKHKEAKVPVKKKKPHKKKLAKAKAKKSKK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttagtgaatttgatttagatcgtcgtttagaaaaaggtattagttctttaggt
tacaaaaagccgacccgtgttcagcagtctgctattcctgaagcactcgacggtttagat
atattggcgagcgcaccaacaggaacgggtaaaaccgccgcttttttgatccctgccatt
caatacctattagactttcctcgtaatgcaccgggtttcgctcgtgtgttagtacttgct
cctactcgtgagcttgcatatcaaattcacgaagtggctgaagcactgtgttcgtcaaca
gatttaaaaattggcgtgatcactggtggtatcaactacggtagccacaaagacatttta
gaaaagaataacgacatcttaatttcgacgccaggccgtcttttagaatacatggacgca
gagagttttcactgtgaaaacgttgaaattttggtattggacgaagctgaccgcatgttg
gacatgggctttagaagcttcatgacgcgcatcgcagaagaatcgcgtaaccgtaaacaa
accatgctattcagtgcgaccttagaaggccgcgggatcatcgagttttcacaaggcgtt
ttgaccgaagctgctcgcattgacgaagacgcaccgcgtcgtgaacgtggcaaaattgtt
cagtggacccatttagcagacgattacgatcacaaattcgcccagctattgcactattta
cagtctgaggacgtacaaaaatctatcgtgtttgtgaagacgcgtgagcgtttagaccag
cttgtgcaacgcttacagggccacgaaatttacgcgacttacttgcaaggtgaaatgccg
caagacagacgcatgaaagccattgataaaatgaaaaatggccgcagtaaggtgttagtc
gctactgatgttgcagctcgaggcttagacatcaccgacatcactcacgtgtttaacttt
gatatgccgcgtactgctgatgtttatgtacaccgtattggccgtaccgctcgtgcaggg
gcgaagggctacgctgtgagctttgttgaagcgcacgatatgggcattcttaagaagata
gaaagttacactaaacaaacattcaaacaccgtaaaatcaaaggattagaacctaagcac
aaagaggctaaggtaccggtgaaaaagaaaaaaccacacaagaaaaaattggccaaagca
aaagcgaaaaaatccaaaaaataa
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