Pseudomonas syringae CC1557: N018_05640
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Entry
N018_05640 CDS
T03014
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psyr
Pseudomonas syringae CC1557
Pathway
psyr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N018_05640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyr03400
]
N018_05640
Enzymes [BR:
psyr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
N018_05640
DNA repair and recombination proteins [BR:
psyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
N018_05640
Prokaryotic type
N018_05640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHG39751
UniProt:
W0MSI6
LinkDB
All DBs
Position
1167377..1168069
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AA seq
230 aa
AA seq
DB search
MTSDDRIKLEPSWKEALRDEFEQPYMAQLREFLRQEHAAGKEIYPPGPLIFNALNSTPLN
NVKVVILGQDPYHGPNQAHGLCFSVQPGVPTPPSLVNIYKELKRDLNIDIANHGCLQSWA
DQGVLLLNTTLTVERANAASHAGKGWQHFTDRIIQVVSEHQPHLVFLLWGAHAQSKQKLV
DATKHLVLTSVHPSPLSAYKGFLGNGHFGRTNKYLEQNGIEPIDWRLPAL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactagcgatgaccgcatcaagcttgagcccagctggaaagaagccctgcgtgatgaa
ttcgaacagccctacatggctcagttgcgcgagtttctgcgccaggagcatgcggcaggc
aaggagatctatccgccgggaccgcttatcttcaacgcgctcaattccacgccgctgaat
aacgtcaaggtcgtcatcctcggtcaggacccgtaccacggcccgaatcaggcgcacggc
ctgtgcttttccgtgcagccgggcgtgccgacgccgccgtcgctggtcaacatctataaa
gagttgaagcgcgatctgaacatcgacattgccaatcatggttgcctgcaatcctgggcg
gatcagggcgttcttctgctcaacaccaccctgaccgtcgaacgcgccaacgctgcgtcg
catgcgggcaaaggctggcagcacttcaccgaccggatcattcaggtggtcagtgagcac
cagccgcatctggtgtttctgttgtggggcgctcatgcgcagagcaagcagaaactggtc
gatgccaccaagcacctggtgctgacgtccgtccatccatcgcctctgtcagcctataag
ggctttttgggcaatggccatttcgggcggaccaacaaataccttgagcagaacggcatc
gagccgatcgactggcgactgccggctctctga
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