Pseudomonas syringae CC1557: N018_14170
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Entry
N018_14170 CDS
T03014
Symbol
dppF
Name
(GenBank) peptide ABC transporter ATP-binding protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
psyr
Pseudomonas syringae CC1557
Pathway
psyr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N018_14170 (dppF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psyr02000
]
N018_14170 (dppF)
Transporters [BR:
psyr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
N018_14170 (dppF)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_29
AAA_16
SMC_N
RsgA_GTPase
AAA_25
AAA_5
Mg_chelatase
AAA_18
nSTAND3
nSTAND1
DUF87
Motif
Other DBs
NCBI-ProteinID:
AHG41277
UniProt:
W0MS59
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All DBs
Position
3121232..3122284
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AA seq
350 aa
AA seq
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MSKHFAVESSLLQPKKPPVQAVNEINLSVRKGETLALVGESGSGKSTLGRLLLNLLQPTA
GDVIYEGRNLANLTPEKLRQVRRDLQIIFQDPFASLNPRMTVESIVGEPIWLHSKASRSD
RQARVAELLRTVGLAPEHGGRHPHEFSGGQRQRIGIARALASEPRLILGDEPVSALDVSV
QAQVVNLLEDLKHQFGLTLVIVAHGLAVIRHMSDRVAVMYLGEIVELAPVNALFEAPLHP
YTQALMAAVPVSHPDLRQPRPLLGGDMPSPSRPPSGCRFHTRCPHARALCKEAAPLMETV
EAERHVACHFWREIANAGSGTLILPTPSAAYTQRLNLFKHHQSLAAESQP
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
ctgagcaagcacttcgccgtggaaagtagtcttttgcagccgaagaagccgccggtacag
gccgtcaatgagatcaacctgtcagtccgcaagggtgagacgctggcactggtaggcgag
tccggctcgggtaaatcaaccctcggccgcttgctgctcaacctgctgcaaccgactgcg
ggtgacgtgatttacgagggccgcaacctggccaacctgacgccggaaaagctgcgtcag
gtacgtcgtgatttgcagatcatctttcaggacccgttcgcttcgcttaatccacgtatg
accgtggaatccatcgttggcgaacccatctggctgcacagcaaagccagccgcagcgac
cggcaggccagggtcgccgagttgctgcgtacggtagggcttgctccggagcacggtggt
cggcatccgcatgaattctccggcggtcagcgccagcgtatcggtatcgcgcgtgctctg
gcttccgagccacgcttgatcctcggtgacgagccggtctcggcgctggacgtttcggta
caggcgcaagtggtcaatctgcttgaagaccttaagcatcagttcggcctgacgctggtg
attgtcgcccatggactggccgtgatccgccacatgagcgaccgcgtggcggtgatgtat
ctgggtgaaatcgttgaactggcgccggtcaacgcgctgttcgaagcccctttgcatcct
tatacccaggcgttgatggctgcggtgccggtcagccacccggacctgcgccagccgcgt
ccgctactcggcggcgacatgcccagccctagccggccaccttccggttgccgttttcat
acccgttgcccgcatgcccgtgcgctgtgcaaagaagctgcgccgctcatggaaaccgtt
gaggccgaacgccatgtggcttgccacttctggcgtgaaatcgccaacgcgggcagcggc
acattgatccttccgacacccagcgccgcttacacacagcgcctgaatctgttcaagcac
catcaatccctcgcagcggagagccagccatga
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