Paenibacillus terrae: HPL003_18410
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Entry
HPL003_18410 CDS
T01668
Name
(GenBank) polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pta
Paenibacillus terrae
Pathway
pta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPL003_18410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pta03019
]
HPL003_18410
03016 Transfer RNA biogenesis [BR:
pta03016
]
HPL003_18410
Enzymes [BR:
pta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HPL003_18410
Messenger RNA biogenesis [BR:
pta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HPL003_18410
Transfer RNA biogenesis [BR:
pta03016
]
Prokaryotic type
tRNA degradation factors
HPL003_18410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
SPATA25
S1_2
DUF5667
Motif
Other DBs
NCBI-ProteinID:
AET60424
UniProt:
G7W2S9
LinkDB
All DBs
Position
3916558..3918660
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AA seq
700 aa
AA seq
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MEQRVEMQLGGRKLVLETGRLAKQANAAVKVSYGETVVLCTVTASNAPKDLDFFPLTVNY
EERLYAVGKIPGGFIKREGRPSQKAILSSRLTDRPIRPLFPEGFRNDVQVLNLVMSVDQD
CEPEIAAMIGTSAALSISDVPFNGPIGGVAVGRVDGQFVINPDIAQQNASDLYLVVAGTK
DAIMMVEAEGNEIPEEVMLEAIMFGHDEIKNIVAVIEQLVQVAGKEKMQVKLHAVDEKVN
SEVRSYAAERLVEAVKIVEKHARQEAIDAVNEETVAHFEVQYIETPELLKDVSEVLYDIV
KEEVRRLITHDKVRPDGRKLDEIRPIESDTSILPRTHGSGLFTRGQTQALSVCTLGALGD
VQILDGIDLEETKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALSKVIPSETEF
PYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGVAMGLIKDGEHVSVLTDI
QGMEDHLGDMDFKVAGTAEGVTAIQMDIKINGIDRQILQDALNQAREGRLFILSKMMEAI
QTPREQLSPYAPKIMTMHINPDKIRDVIGAGGKIINKIIEETGVKIDIEQDGRVFIASTN
QEMNEKARSIIEGIVKEVVIGEIYIGTVKRIEKFGAFVEILPGKDGLVHISQLSTERVAK
VEDVVAIGDTITVKVTEIDQQGRVNLSRKAVLTAEAPAKA
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacgtgtggaaatgcagctcggcggaagaaagctggtgctggaaacaggacgt
cttgcaaaacaggccaatgccgcagttaaagtaagctatggcgaaacggttgttctctgt
accgtgaccgcttccaatgcgccgaaagatttggacttttttccactgacggtgaattat
gaagaaagattgtatgctgtgggaaaaatcccaggcggatttattaaacgtgaaggacgt
ccaagtcaaaaagcgattttgtccagccgtctgacagaccgtccgatccgcccattgttc
ccggaaggcttccggaatgatgtacaggtattaaacctggtgatgagtgtcgatcaggat
tgtgagccggaaattgcagcgatgatcggaacctcggcagcgcttagcatttcggacgta
ccttttaacggaccgattggcggagttgctgtaggccgtgtggacggacaattcgtgatt
aacccggacattgcgcagcagaatgcaagtgatttgtatctggttgtagccggaacgaaa
gatgccatcatgatggtagaagcggaaggcaacgaaattccggaagaagtcatgctggaa
gcaatcatgtttggccatgacgagattaagaacattgtggcggtcattgaacaactggtt
caggtggcaggtaaagagaaaatgcaggttaaactgcatgctgtcgatgaaaaagtgaac
agcgaggttcgttcatatgcggctgaacgtttggtggaagccgtcaaaattgtagaaaaa
catgcccgtcaagaggcgattgatgcagtcaacgaagagacggttgcacattttgaagta
caatacatagagacgcctgagcttttgaaagacgtgagcgaagttctctatgatatcgtt
aaagaagaagtccgtcgtctgattacgcatgataaagtgcgtcctgacggtcgtaagctt
gacgagattcgtccgatcgaaagcgatacgagcattttgccgcgtacgcatggctcgggc
ttgttcacacgcggtcaaacacaagcgcttagcgtttgtacacttggcgcattgggtgat
gtgcaaattttggacggcattgatctggaagaaacgaagcgtttcatgcatcattacaat
ttccctccattcagtgtaggcgaggctcgtcctttgcgtgcgccgggtcgtcgtgaaatt
ggacatggtgctcttggtgagcgtgcgctttctaaagtcattccttctgaaactgaattt
ccatatacgattcgtctcgtttccgaggtgctggaatcgaatggctcgacttctcaggct
agtatctgcgcaagcacactggctatgatggatgcgggtgtaccgattaaggctccggtt
gcaggtgtagcgatgggattgatcaaggacggggagcatgtttccgtgttgaccgatatc
cagggtatggaagatcacttgggtgatatggactttaaagtggctggtacagcagaaggc
gtaactgctattcaaatggatatcaagattaacggtatcgaccgtcaaattttgcaggat
gcgctcaatcaagccagagaaggacgtctgttcattcttagcaaaatgatggaagccatc
cagacgccgcgtgagcaattgtctccgtatgcgccgaaaattatgacgatgcacattaac
ccggataaaatccgtgatgttattggtgcgggtggtaaaatcattaacaaaatcatcgaa
gaaaccggcgtaaaaattgatatcgaacaggatggtcgtgtattcatcgcttccacaaac
caagagatgaatgaaaaggcgcgttccattattgaaggtatcgtgaaagaagtcgtgatc
ggagagatttacatcggcacagtgaagcggattgaaaaattcggtgcattcgtcgaaatt
ttaccgggcaaggacggtctggttcatatttcccaactgtctactgaacgtgtagccaaa
gttgaggatgtagttgctattggagatacgattacggtgaaagtaaccgaaattgatcaa
caaggccgtgttaatttgtcccgtaaagctgttctgacggctgaagctcctgcaaaggcc
tag
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