Pseudomonas taetrolens: NCTC10697_03411
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Entry
NCTC10697_03411 CDS
T08085
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ptae
Pseudomonas taetrolens
Pathway
ptae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC10697_03411 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptae03400
]
NCTC10697_03411 (ung)
Enzymes [BR:
ptae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NCTC10697_03411 (ung)
DNA repair and recombination proteins [BR:
ptae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC10697_03411 (ung)
Prokaryotic type
NCTC10697_03411 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
SQF87616
LinkDB
All DBs
Position
1:complement(3652162..3652854)
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AA seq
230 aa
AA seq
DB search
MTPDDRIKLEPVWKQALREEFDKPYMADLREFLRQEHVAGKEIYPPGPLIFNALNLTPLD
KIKVVILGQDPYHGPGQAHGLCFSVPPGISVPPSLVNIYKELKRDLNIDIANHGCLLHWA
EQGVLLLNTTMTVERANAASHAKKGWEHFTDRIIQVVSEQQPKLVFLLWGAHAQSKQKLI
DATKHLVLTSVHPSPLSAYRGFIGNGHFSRTNKFLEQNGLAPIDWKLPAV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgacgccggatgatcgtataaaacttgaacccgtctggaagcaggccttgcgcgaggag
ttcgataaaccttacatggccgacctgcgcgagtttctgcgccaggagcatgtggccggt
aaagaaatctatcctccgggccccctaattttcaacgcgctgaacctgacgcctctggac
aagatcaaagtggtgatcctgggccaggacccttaccacggtcctggccaggcacacggg
ctgtgtttttcggtgccgccgggcatatcggtaccgccttctctggtcaatatttataaa
gagctcaagcgcgatctgaatatcgatattgccaaccatggctgcttgctgcattgggcc
gaacagggcgttttgctgcttaacacgacaatgaccgtggagcgcgcgaacgcagcttcc
catgccaaaaaaggctgggagcatttcaccgaccggatcattcaggtggtgagtgagcag
cagcccaaactggtctttttgctatggggcgcccatgcgcaaagcaaacagaagttgatt
gatgcgaccaagcatttggtgctgacttcggtgcatccttcaccgctctctgcctatcgg
gggtttattggtaatggtcacttcagcagaaccaataagtttcttgagcaaaacgggctg
gcacccatcgactggaaacttccggcggtttag
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