Pseudomonas taiwanensis: ICN73_13920
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Entry
ICN73_13920 CDS
T09297
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ptai
Pseudomonas taiwanensis
Pathway
ptai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ICN73_13920 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptai03400
]
ICN73_13920 (uvrB)
DNA repair and recombination proteins [BR:
ptai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ICN73_13920 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ICN73_13920 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
HAMP
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QOJ88999
UniProt:
A0A7L9G9F5
LinkDB
All DBs
Position
3103551..3105566
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFQPAGDQPEAIRQLVEGIEAGLSHQTLLGVTGSGKTFSIANVIQQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERRDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNEMDFARATFRVRGDVIDIFPAESDLEAIRIELFDDEVENIAAFDPLTGEVFRKLPRF
TFYPKSHYVTPRETLLEAVEGIKEELKERLEYLHKANKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPAGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRMPSALDNRPMRFDEWEDVSPQTIFVSATPGPYEAEHAGRVVEQVVRPTGLVDPQ
VEVRPALTQVDDLLSEIRKRVAAGERVLATTLTKRMAEDLSDYLADHDVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADNVTGSMQRAIDETERRREKQIAFNEANGIVPKGVVKDITDIMEGATV
PGARSKKRKGMAKAAEESARYEAELRTPGEITKRIKQLEEKMMQFARDLEFEAAAQLRDE
IAQLRERLISS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagttccagctcgtcacacgtttccagccggccggcgaccagcccgaggctatc
cgccagttggtcgaaggcatcgaggcggggctgtcgcaccagacgttgctcggggtgacc
ggctcgggcaagaccttcagcattgccaacgtcatccagcaggtgcagcgcccaacgctg
gtgctggcgcccaacaagacgctggccgcgcagttgtacggggagttcaaggcgttcttc
cccaacaacgcggtggagtacttcgtttcctattacgactactaccagccggaagcctac
gtaccctcgtcggacaccttcatcgagaaggacgcctcgatcaacgaccacatcgagcag
atgcgcctgtcggcgaccaaggcgctgctggagcggcgtgacgcgatcatcgtgaccacc
gtgtcgtgcatctacggcctgggcagccccgagacctacctgaaaatggttctgcacgtg
gaccgtggcgacaagctcgaccagcgcgcgctgctgcgccgcctggccgacctgcagtac
acccgcaacgaaatggactttgcccgcgccaccttccgggtacgcggcgacgtgatcgac
atcttcccggccgaatcggatctggaagccattcgcatcgagctgttcgatgatgaagtg
gagaacatcgccgccttcgatccgttgaccggcgaggttttccgcaagctgccacgtttc
actttctaccccaagagccactacgtcaccccgcgggaaacgctgctggaagcagtggag
ggcatcaaggaagaattgaaggagcgtctggagtacctgcacaaggccaacaagctggtc
gaagcgcagcgtctggagcaacgtacccgcttcgatctggagatgatcctcgagctgggc
tactgcaacggcatcgaaaactattcgcgctacctgtccgggcgcccggccggggcaccg
ccgcccaccctgtacgattacctgccgcctgatgcgctgctggtgatcgacgaatcacac
gtcagcgttccgcaggtcggcgccatgtacaagggcgaccgttcacgcaaggagaccctg
gtcgagtacggcttccgcatgccttcagcgctggacaaccggccgatgcgtttcgacgag
tgggaggatgtcagcccgcagaccatttttgtttcggccactccgggcccctacgaggct
gagcatgccgggcgcgtggtggagcaagtggtgcgcccgaccgggctggtcgacccgcag
gtagaggtgcgcccggcgctgacccaggtcgacgacctgctgtccgagatccgcaagcgt
gtcgcggcaggcgagcgtgtgctggcgaccacgttgaccaagcgcatggccgaggacctc
agcgattacctggccgaccacgacgtgcgggtacgctacctgcactcggacatcgacacg
gtggagcgggtggagattatccgtgacctgcgcctgggcaccttcgacgtgctggtgggc
atcaacctgctgcgcgagggcctggacatgcccgaggtgtcgctggtggccatcctcgat
gcggacaaggaaggttttctgcgttccgagcgctccctgatccagaccattggccgcgcg
gcacgtaacctcaatggccgggccatcctgtatgccgataacgtaacaggctcgatgcag
cgggccattgacgaaaccgagcgccgccgcgagaagcagatcgccttcaacgaagccaac
ggcatcgtgcccaagggcgtggtcaaggacatcaccgacatcatggagggtgccaccgtg
cccggtgcgcgcagcaagaagcgcaagggcatggccaaggcggcggaggagagcgcccgt
tacgaggccgaactgcgtacgccgggcgagatcaccaagcgcatcaagcagctggaagaa
aaaatgatgcagttcgcccgcgacctggagttcgaagctgcggcgcagttgcgtgacgag
attgcgcagctgcgggagcggttgattagcagctga
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