Phyllopteryx taeniolatus (common seadragon): 133479263
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Entry
133479263 CDS
T09737
Name
(RefSeq) collagen alpha-1(XVIII) chain-like isoform X1
KO
K06823
collagen type XVIII alpha
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptao04147
]
133479263
00535 Proteoglycans [BR:
ptao00535
]
133479263
00536 Glycosaminoglycan binding proteins [BR:
ptao00536
]
133479263
Exosome [BR:
ptao04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133479263
Proteoglycans [BR:
ptao00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
133479263
Glycosaminoglycan binding proteins [BR:
ptao00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133479263
BRITE hierarchy
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Fz
DUF959
DUF1554
Motif
Other DBs
NCBI-GeneID:
133479263
NCBI-ProteinID:
XP_061631963
EnsemblRapid:
ENSPTLG00010017591
LinkDB
All DBs
Position
1:complement(16971786..17002346)
Genome browser
AA seq
1617 aa
AA seq
DB search
MLRILLLVLCVGSLEAWFWNVAPEPTTQPTTSAATTPNGTKKVEDEDEDLSGAGEEIVNV
ATGIRNLVKAWDVTTSPGPTQGSLKVESADPNITGNTDGLRVGTGDEGSGVWEGDASGSG
SGSRQNLGSGVESVSIHPSNLSFANNGTLGAGSDPFCLPVPSVWHMCSRKHPQFFTLPNF
FNHTSVEQVGAALREWVRLTPTGCHQRIEWFLCLLLVPRCPSPTTALLRLPCRSFCHQVQ
DSCWVSLDSAQLPVECGLLPVGAEEPGRPPCVSVSYSKEQSSLSLLQLIGDPPPDEIGRV
IGPSGTPAYIFTSAAVSGQPALAHVPNPFYRHFSLLFHIKPSTSAASVLFAVTDGPQRLM
YVAVKLSAVQWGRQRVRFFYTEPDSEASYEAASFDVTSLVGKWTRFSLSVFEEQVTFYQD
CDSVPRVVKFERSPDPMELDTGAGIFVAQAGGADLDKFQGEIAELRLVGNSRAAERLCDD
IDDDSDAASGDFGSGEGVRRQTGGKVKVSHLTTPASFRPVPEPPLIASKGGRLKETGLSG
AKGEKGDRGEKGTRGDRGHAGPKGDPGSGFSSQAGGVGQKGEKGDKGSTAFGSKGERGAQ
GLPGPPGPPGAAAEVVRIGDGSLKQQVAGPPGSQGRDGLPGLPGADGAPGDPGEDGKTGP
AGPQGFPGTPGSPGPKGEEGERGEGQPGPRGPPGLPGPPGPGTGNRPTFVDMEGSGFPEW
EKIRGLVGPPGPPGPPGLPGVPGTSVALGSNGLVAFGPPGPPGRDGVPGPPGSPGDRGLP
GQPGLRGEKGDSGELNSQGRAGEKGSRGNPGLPGTPGQTGLAGLPGPMGPVGPPGQPGPP
GPPYPFGFADQEDFEGNGGLRRLSGPPGPQGLPGNLGLPGRPGLPGTNGDKGAEGPRGPP
GIPGLDGFPGHLGQKGDGGDKGEQGLPGRDGGPAGPPGPPGPPGRIIYRNGDSDNLYWSE
GLQTGAGIPGQAGFPGPIGPKGEKGDTGLPGFAPKGEKGEPGVIMGPDGRPLYLGDLTGK
PGDIGPPGPVGPPGSYGRQGQKGEIGLPGRPGRPGLNGIQGQKGEPGGGSGATYYGPPGP
PGPPGPPGPTSRGYDDYARYYQATKGEKGDSGAPGLPGLPGGGSDRDIYALKNELKGETG
DPGSKGEKGEPGGGYYDPRYGGSAIGVPGVPGPQGPKGDSIAGPPGPQGPTGPPGRGYDG
RPGPPGPPGPPGVPSFPGPHRGTHTISIPGPPGPPGTPGIPGHSSGVTVLQSYDIMTATA
RRQPEGSLVYVIDRTDLYLRVRDGVRQVQLGGYIPLPREDANEVVAVEPPPVVPYSPHHI
SNDSHSHAERPDQVNPDSFYQPDPRHSSQLYPPYQTNPDGRNQNLPDPRLYHPDTRHTSQ
PDPQYPAPTDPRYPSYTDRVNNPDGRYPVHPAHEHPPYYAVTPQRRPPPPVAQTPPHHHT
SGPGLHLIALNQPQSGSMRGIRGADFLCFTQAQSIGMKGTFRAFLSSKLQDLHSIVRKAD
REHMPIVNLKDEVLFDNWDAIFNDGTMKENVPIYSFDGKDVLRDSTWPEKMLWHGSATNG
QRQVDGFCESWRMSNHILSGKASPLHSGSLLQQTSSSCSSSYVVLCAENSYIGYGRR
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggatcctgctcctggttctgtgtgttggaagcttggaggcctggttctggaac
gttgcccccgagcccaccacgcagcccacaacaagtgctgccacaacacccaatggcaca
aagaaggtggaagacgaggatgaggatttgtcaggcgcgggagaagaaatcgtcaacgtg
gccactggaatccgtaacttggtcaaggcgtgggatgtgaccacgagccctgggcctact
caaggttccctgaaggtggagagcgctgacccaaacattacgggtaatactgacgggctc
agagtggggactggggacgaagggtctggagtttgggaaggtgatgcttctggatcagga
tcggggtccaggcaaaatcttggatctggtgtagagtcagtgagcatccatccaagtaac
ttaagctttgcaaacaacgggactctaggtgctggttctgatccattttgtctgcccgtg
ccctctgtttggcacatgtgctccagaaaacacccacagttcttcacattacctaatttt
ttcaaccacacgtctgtggagcaggtgggggcggctctacgggagtgggtgcggctgacc
ccgacgggctgtcaccaacgcatagagtggttcctgtgcctcttgctggtccccaggtgc
ccctcgcccaccaccgcactcttgcgcctgccctgccgcagcttttgccaccaagtgcag
gacagctgctgggtgtcgctggacagtgcacagcttccggtggagtgtggcctcctgcct
gtgggggcggaggagcctgggcgtcctccgtgtgtgtctgttagttactcgaaagagcag
agcagtttgtctctactccagctaattggagatccgccacctgatgagataggtcgggtc
atcgggccgagcgggaccccggcctacatcttcacttctgccgctgtgtcgggccaaccg
gctctggcccacgtacccaacccattctaccgccacttttccctcctctttcacatcaag
ccgtccacttcggccgcctccgtcctcttcgccgtcaccgatgggccccagaggcttatg
tatgtggcggtcaagctcagcgccgtgcagtggggccggcagagggtgcggtttttctac
accgagccagattctgaggcgtcgtacgaggccgccagcttcgatgtgacgagcctggtg
ggcaaatggactcgattctcgctgtctgtctttgaggagcaagtgaccttctaccaggac
tgtgattcagtgccacgggtggtaaagtttgagcggtccccggaccccatggagcttgac
acaggggccgggatctttgtcgctcaggctgggggggccgacctggacaagtttcagggt
gaaattgctgagctgaggcttgtgggaaactctcgggctgccgagcgcttatgtgacgac
atcgacgacgactccgacgctgcctctggcgactttggcagcggtgaaggcgtcaggagg
cagacgggaggcaaagtaaaggtcagccatttgaccacacctgcatctttcaggccggtg
cccgagcccccattgatagcctcaaaaggaggcagacttaaagaaacaggtttaagtggc
gctaaaggagagaaaggtgacagaggagagaagggcacccgaggggacagaggccatgcg
gggccaaagggagaccctggttcaggcttttcctcacaagctggaggtgttggccaaaag
ggagaaaagggagataagggtagtacagcgtttggaagtaagggagagcgtggcgcacag
ggcctcccaggtccccccgggcctcctggagctgcagccgaggtcgtccggattggggat
ggctctttaaagcagcaggtggccggaccacctggatctcagggccgagatggattgcct
ggtctaccaggagctgatggagcgcctggggatccaggagaggatgggaaaactggtccc
gcggggccgcaaggtttcccaggaactcctggaagtcctggtcccaaaggagaagagggt
gagcggggcgaaggtcaacctggacccagaggtcccccagggcttccaggacctcctgga
ccaggaactggaaatcgtccaacatttgttgacatggagggctcaggattcccagaatgg
gagaagatccggggtcttgttggtcctccaggccccccaggccctccgggtcttcctggg
gtccctggtacatcagttgcacttggatccaatggtctagttgcctttggacctcctgga
ccacctggaagggatggggtcccaggtccacctggttctcctggggatcgtggtctacca
ggtcaacctgggctcagaggagaaaagggcgacagtggtgagctcaactctcagggaaga
gctggcgagaagggttctcgtggtaacccaggactgccgggaacaccaggacagactggg
ctagcagggcttccaggtcccatgggcccagttggacccccagggcaaccagggccacct
gggccgccatacccctttggctttgctgaccaggaagactttgagggaaacggtggatta
cggagactcagtggcccaccaggaccacagggtcttccaggtaacttaggtctaccaggc
agaccaggtttaccaggaaccaatggcgacaaaggagcagaaggaccaagaggtccacct
ggaattccgggtctggatggatttccaggacacctagggcagaagggagatggaggagac
aagggggaacaaggtctgccagggcgcgacggtgggccagctggtcctccagggcctccg
ggacctccaggacgaatcatttatcggaatggggattctgacaacctttattggagtgaa
gggttgcagacgggagcaggaattccaggccaagctggattcccagggcccatcggaccg
aaaggggaaaagggggacacaggtctgccaggatttgcccctaagggtgaaaaaggagag
cctggtgtcatcatgggtccagatgggcggcctttgtacctgggggacctgacagggaaa
ccaggagatataggacccccaggcccagttggacctccaggctcttatggtcgtcaaggt
caaaaaggagaaattggacttccgggtagaccaggtcgaccgggactgaacggcatccaa
ggacaaaaaggagagccaggcggtgggtctggagccacatactatggtcccccaggtcca
ccgggcccacctggaccccctggaccaacatccagagggtatgatgactacgccaggtat
tatcaagctactaaaggagagaaaggtgactctggagcaccaggtttacccggcctacca
ggtggtgggtcagaccgtgacatttatgcattaaagaatgagttgaagggtgaaacggga
gatcctggctcgaaaggagagaaaggagaaccaggtgggggatattacgacccacgatat
ggagggagcgcgataggagtgccgggagtccccggacctcaaggccccaaaggggactcc
attgctggcccaccgggtccccaagggccaactggtccaccaggaagaggctatgatggc
cgacctggaccaccagggccacctggaccccctggtgtcccttccttccctggacctcat
aggggcacacacactatcagtattcctggaccacccgggccacctggaacacctggaata
ccaggacactcttccggggtgacagtgttgcagtcctatgacatcatgacagccactgct
agaagacaacctgagggttcactggtctacgtcatagaccggacagatctttatctacga
gtcagagacggggttcgtcaagtccagcttggtggctatattccattgccacgtgaggat
gctaatgaggttgtagcagtggagcccccaccggtcgttccgtactccccacaccacatc
tccaatgactctcacagtcatgcagagaggccggaccaagtgaatccggacagtttttat
cagcctgacccacgtcactccagccagctgtaccctccataccaaacaaaccctgatggc
agaaaccaaaaccttcctgatcccagattataccaccctgacactcgacatacatctcag
ccagatccccaataccctgccccaacagaccccagataccccagttacacagaccgggtg
aataacccagatggtcgatacccagtccatccagcccatgaacacccaccttactacgct
gtaactcctcagcgaaggcctcctccacctgtggcccagactccgccccaccatcacaca
tcagggccagggctccaccttatcgccttgaaccagccccagagtggatccatgcggggc
atccgaggtgctgactttttgtgcttcactcaggctcaaagcatcggaatgaagggaaca
ttccgagccttcttgtcctcaaaactccaagatctccacagcattgtccgcaaagctgac
agagaacatatgcctatagttaacttgaaggatgaggttttgtttgacaactgggatgcc
atttttaacgatggcacaatgaaggagaatgtccctatctactcttttgatggtaaagat
gttctccgcgacagcacatggcctgagaagatgttgtggcacggctctgccaccaacggt
cagcggcaggttgacggtttctgtgagtcatggcgcatgagcaaccacatactaagcggc
aaggcgtccccgctgcacagcggcagtctgctccagcagacctccagcagctgctccagc
tcctacgtagtgctgtgcgcggagaacagctatattggctatggcaggagataa
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integrated database retrieval system
