Pyrenophora teres: PTT_13150
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Entry
PTT_13150 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
pte
Pyrenophora teres
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pte03041
]
PTT_13150
03009 Ribosome biogenesis [BR:
pte03009
]
PTT_13150
Enzymes [BR:
pte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PTT_13150
Spliceosome [BR:
pte03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
PTT_13150
Ribosome biogenesis [BR:
pte03009
]
Eukaryotic type
90S particles
Helicases
PTT_13150
Pre-60S particles
PTT_13150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
DEAD
Helicase_C
PK_Tyr_Ser-Thr
DUF4217
ResIII
ABC1
ERCC3_RAD25_C
Haspin_kinase
BUD22
Motif
Other DBs
NCBI-ProteinID:
EFQ90287
UniProt:
E3RVF9
LinkDB
All DBs
Position
Unknown
AA seq
1053 aa
AA seq
DB search
MGDLANRKVFKVFNQEFIVDERYNVTKELGQGAYGIVCAATNNQTGEGVAIKKVTNVFSK
KILAKRALREIKLLQHFRGRTPKRKDSPAPALEATHPLRTILNTVAQITCLYDMDIPRPD
NFNECYLYEELMECDLAAIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNL
LVNADCELKICDFGLARGFSMDPEENAGYMTEYVATRWYRAPEIMLSFQSYTKAIDVWSV
GCILAELLGGKPFFKGRDYVDQLNQILHYLGTPNEETLSRIGSPRAQDYVRNLPYMQKIS
FQSLFRNANPDALDLLDRMLAFDPSSRISVEEALEHRYLQIWHDASDEPSCPTTFDFQFE
VVEEIPEMKKMILDEVSRFRQMVRVQPGAGAGANQAPQVPIPNNYDRAGYEDPRPQEAFN
QGGWNGSDLERDLQGLDATIERRTIHTMSPAAVESSNKRKRSHKSKKVAEVAAPAHNGVE
KARKKARKEREAEAVVEEPVVEDAAAEEDSDEEAEEKTAEVDVAEENEDKDDEDEDAEAQ
DDDGDNDDALAQPSGAAGSSDLTSGTTMPMANPTEFAELNLSERTRQAIDGMGFKTMTEI
QQKAIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLSQLRFKPRNGTGVIVVSPTRELAL
QIFGVARELMEHHSQTFGICIGGANRSAEAEKLRKGVNLLIATPGRLLDHLHNTQGFVFK
NLRSLVIDEADRILEVGFEDEMRSIIKILPTERQTMLFSATQTTKVEDLARISLKAGPLY
INVDHRAEHSTVQGLEQGYVLCDSDTRFRLLFSFLKKHQKKKVIVFLSSCASVDFYSELL
NYIDLPVLGLHGKLKQQARTNRFFEFVNAQSGTLICTDVAARGLDIPEVDWVIQFDPPDD
PRDYIHRVGRTARGANGKGRSLMFLLPSEVGFLKLLKESRVPLVEFELPANKILNIQSQL
EALISKNYYLNKSAKDGYRSYLQSYASHSLRSVFDVNKLDLVKVAKSFGFSTPPRIDITL
GAGLSRDKKVEGRRAYGSQPQQGRRPMKPGKRF
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatcttgccaaccgcaaagtgttcaaggtgttcaaccaagaattcatcgtcgac
gagcgctacaatgtgaccaaggagctcggacagggtgcctacggcatcgtgtgtgcggcc
accaacaaccaaacaggcgaaggcgtggccattaagaaggtcaccaatgtcttcagcaag
aagattcttgcgaagcgtgccctgcgcgaaattaagctgctccaacactttagaggtcgg
acaccgaaacgtaaggacagccctgccccagcgctggaggctactcacccgctccgcacg
atactaaacaccgtcgcacagataacatgcctctacgacatggacatcccccgtccagac
aacttcaacgaatgctacctttacgaggaactcatggaatgcgatctggcagccattatc
cgatctggccagcccttgaccgatgcccatttccaatcgttcatctaccagatcctatgc
ggtctcaagtacatccactctgcaaacgtcctccaccgagatctcaagcccggcaaccta
ctcgtcaatgccgactgcgaactcaagatttgcgatttcggtctggcaagaggtttctcc
atggaccctgaagagaacgcgggatacatgacagagtatgtcgctacccgatggtacaga
gctcctgaaatcatgttgagcttccaaagctacacaaaagccatcgatgtatggtccgta
ggatgtattctggctgaactgctgggaggcaagcccttcttcaagggtcgcgattacgtc
gaccagttgaaccagatcctacactacctcggaacaccaaatgaggagacactgtcgcgc
atcggctcgccccgtgcgcaagactacgtgcgcaatctgccatacatgcagaagatttca
ttccaatcgctcttcagaaacgccaaccctgacgcgctcgacttgctagaccgcatgctc
gccttcgatccctcaagccgtatctcagtcgaggaagccttggagcaccggtacctgcaa
atctggcacgatgcctcagacgagccatcatgcccaacgacgtttgacttccagtttgaa
gttgttgaggagattcccgaaatgaagaagatgatcctagatgaagtcagtcgattccgc
caaatggtccgcgtacagcccggtgcaggcgccggtgcaaaccaggcgccacaggtcccg
atacctaacaactacgatcgcgctggctacgaagatccaaggccacaagaagctttcaat
cagggggggtggaacggtagtgatctagagcgagatcttcagggtcttgatgcgacaatc
gaacgacgcacaatccacacaatgtcgcccgccgcagtcgagtcgagcaacaagagaaag
aggtctcacaagagcaaaaaggttgcagaagtagctgcgccggcgcataatggcgtagag
aaggcgcgcaagaaggctcgcaaagaaagagaggccgaagccgttgtggaggagcctgtc
gttgaagatgctgctgctgaggaagatagtgacgaagaggccgaggagaagactgcagag
gtagacgttgctgaggagaacgaggacaaggacgacgaggacgaagatgcagaagcgcaa
gacgatgacggcgacaacgatgatgcgctagctcaaccatctggtgccgctggcagctcc
gacctcacctccggaaccaccatgcccatggcgaacccgacggaatttgctgagcttaac
ctctctgagcggacaagacaggccattgacggcatgggattcaagactatgacggagatt
cagcagaaagctatcccgcctcttcttgctggtagggatgtgctcggtgcagccaagact
ggcagcggaaaaacgctggcctttctcattcccgccatagaaatgctgtcacaactgcgc
ttcaaacctcgcaatggcacaggtgtcattgtggtttcgcctacaagagagctggcgcta
cagatcttcggagtagcgcgcgagctcatggagcatcactcacagacattcggcatctgt
atcggaggggcgaatcgaagcgccgaagccgaaaagctgagaaaaggagtgaacttgctc
atcgccacgcctggtcggctgttggatcatttgcacaacacacagggattcgtcttcaag
aacttgagatcgctcgtcatcgacgaggcagaccgcatccttgaggtcggattcgaagac
gaaatgagatcgatcatcaagattctgcctactgagcgccaaacgatgctattttctgcc
acccagacgacaaaggttgaagatctcgcgaggatatcgctcaaggccggtcctctttac
atcaacgtcgaccaccgagccgagcacagcaccgtgcaaggattggagcagggctacgtc
ttgtgtgactcggacaccagattcagacttctcttcagcttcctgaagaagcaccagaaa
aagaaagtgattgtcttcttgtcttcatgtgcgtctgtggacttttacagcgaactgctc
aattacatcgacctgcccgttctgggtctgcatggcaagctcaagcaacaggcgcggacg
aaccgcttctttgagtttgtgaacgctcagagtggcacactgatttgcacagacgttgct
gctcggggattggatatccccgaggtggattgggtaattcagtttgatccgccagacgac
ccaagggattacattcaccgagtcggacgaactgcaagaggggccaacggtaaaggccga
agtttgatgttcctcttaccgtcggaggttggcttcctgaaactgctgaaggaatcgcgt
gtgccacttgttgagtttgagctgccagcgaacaagattctgaacattcaatctcaacta
gaagcgctcatctcgaagaactactacctcaacaagagcgcaaaggacgggtatcgatca
tacctccagagttatgctagccacagcctgcgttctgtgtttgacgtgaataagcttgac
cttgtgaaggttgcgaaaagctttggtttctcaacgccgccaaggatcgacatcactcta
ggggcgggtttgagtcgcgacaagaaggtagagggccggagagcatatgggagccaaccg
cagcagggacggcggccgatgaagccaggcaagaggttttga
DBGET
integrated database retrieval system
