Pyrenophora teres: PTT_17650
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Entry
PTT_17650 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pte
Pyrenophora teres
Pathway
pte03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PTT_17650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pte03400
]
PTT_17650
Enzymes [BR:
pte01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
PTT_17650
DNA repair and recombination proteins [BR:
pte03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
PTT_17650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_N
DNA_ligase_A_M
BRCT_2
DNA_ligase_A_C
RNA_ligase
BRCT
LIG3_BRCT
Bac_globin
Motif
Other DBs
NCBI-ProteinID:
EFQ86998
UniProt:
E3S4W2
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MTEDTPMPDADAIRENTLMYGHDDDLDDKYPTRPINLHKTLPFHTLFTDLFNPLMETQKR
KQPAGARRRVGPHGHSNMSPHEAKRNIIQRFIANWRKQVGNDFYPAMRLIIPEKDRDRAM
YGLKEKAIAKVLIKLTRIGKDSDDAKHMLNWKLPGQLNKASASTAGDFAGRCYEILSTRQ
LKTEYSDMTIAEVNNALDRLSQVGAEDEQVKIFQRFYRRMNAEEMTWLIRMILRQMKIGA
TEKTFLDIWHPDAETLFNISSNLRRVCWELFDIELRLQGEDTGLSLMQCFQPQLAQFQDK
VGSFEKLVTRFKGDENDDTFWIEEKLDGERMQLHMMEDPDAPGGKLFGFWSRKAKDYAYL
YGRHFDGDEAGALTRFITDAFGENVRNIILDGEMITWDMETDHIVGFGTLKTAALSEKEN
KTNKNTGQRPLFRVFDCVYLNDKLLTQYTLRDRRRALESAVKGVTRRLEVHPYIEARSHT
EIEPALRKVIAESSEGLVLKNPRSMYCLNQRNNDWMKVKPEYMSEFGESLDCIVVGGYFG
SGHRGGVHSSFLCALLTDKDAKPGDPKYEHCWSFFKVGGGFSREDYAAIRGRTEGKWHNW
DRRRPPPFIELGGHEQNRQHERPDQWIRPSDSVVLECKAASVESSDKFRSTLTLRFPRFK
LLRVDKRWDQALSIQEFLDVKSRAEKEKSEKEKEFKIEQSRRKKARTTKKPLTVVGDDAV
ITPYAGAVSKVFEGLTFYIMTEQVHPSKKSKADLEALVKANGGRLIQRDTTAKDLVIVAD
KRLIKVASLEKRGTNNIVKPIWLQDCIMQNERDAGAPPYLLPFEPNRHMYYLHDDDQMDY
EANLDDNGDSYARDITDVDEMRRLLDGVEIPKSKFSRDAFLEQLEGHGEDFSQFKTYMFQ
NVKAKFSGEVGSELRVRLAKNYVRFGGGQVADGGDEEGVTHVVVADGQTSAAKGKARVNG
LARVVGLGWIEKCWEEGTRIDEERFQWG
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagataccccaatgcccgacgcggacgcgattagggagaacaccctcatgtac
ggccacgatgacgacctcgatgataaataccctaccaggccgataaacctccacaaaaca
ttgccttttcacacgctattcactgacctcttcaatccgctcatggagacgcagaagagg
aagcagccagcaggggctcgtcggcgagttggtccacacggacactccaacatgtcgccc
catgaagccaagcggaacatcattcaaaggttcatcgcaaattggcggaagcaggtcggc
aacgacttctacccggcaatgcgactcatcatacccgagaaagaccgtgatcgggccatg
tacggcctgaaagagaaggcaattgcaaaggtgttgatcaaactcaccagaatcggcaag
gactcagatgatgccaagcacatgctcaattggaaactgcccggccaactcaacaaggct
tcagcttccacagcaggtgactttgcagggagatgctatgagattctgtcaacacgacaa
ctcaaaaccgagtacagcgacatgacaattgcagaagtcaataatgcactggatagactg
tcgcaggttggtgccgaggatgagcaagtcaagatcttccagagattctatcggaggatg
aatgctgaagagatgacttggctgatccgtatgattctacgtcagatgaagattggtgca
acggagaagacgtttcttgacatatggcatccagacgcagaaacactcttcaacatatct
tcgaacctccgacgcgtgtgctgggagctcttcgacattgagcttcgactacaaggtgaa
gatactggtcttagtctgatgcagtgttttcaaccccagttggctcagttccaagacaag
gttggttctttcgaaaagctcgtcacgagattcaagggagatgagaacgatgataccttc
tggattgaggagaagctcgacggagagagaatgcagcttcatatgatggaggatccagac
gcgccaggcgggaagttgttcgggttctggtcacgcaaggcaaaggactacgcatatcta
tatggtcgacatttcgacggcgacgaggctggtgcactgacacgcttcatcaccgacgcg
ttcggggagaatgtcaggaacatcatcttggatggcgaaatgatcacatgggacatggaa
actgaccacattgtcggctttggtacactgaagacggcagctttgtctgaaaaggagaac
aagacgaacaaaaatacgggccaacggccgctgttccgagtattcgattgcgtttatctc
aacgacaaactactcacacagtacacactacgtgatcgccggcgtgctcttgaaagcgct
gtcaaaggcgtgactcgaagactggaagttcacccatacattgaagcacgctcacacacc
gagatcgagccagcactgcgcaaggtcatcgcggaatcttccgaaggtcttgtactcaag
aacccccgttcaatgtactgcctcaaccagcgcaataacgactggatgaaggtcaagcca
gaatacatgtcagagtttggcgaatcgctcgattgtatagttgtcggtggatacttcggg
tccggccatcgtggtggtgtgcactcgtccttcttgtgcgcgttactgacggacaaggac
gcaaagccgggtgatccgaaatacgagcattgttggtcatttttcaaagtcgggggcgga
ttcagtcgcgaggactatgctgccatacgaggtcgaacagagggaaaatggcacaactgg
gatcgtcgacgaccaccaccattcatcgagctgggcggccacgaacaaaatcgtcaacac
gagcggccagaccaatggatccgaccgagcgattcggtggtcctagaatgcaaagccgcc
agcgtagaaagcagcgacaaattccgctccacattaaccttacgcttcccccgcttcaag
ctcctccgcgtagacaagcgctgggatcaagccctctccatccaagaattccttgatgtc
aaatcccgagcagaaaaagagaagtcagaaaaggagaaagagttcaaaattgaacagtcc
cgccgcaaaaaggctcgcacgaccaagaaaccgctcaccgttgttggcgacgacgcagtt
ataaccccgtacgcaggcgcagtatccaaagtctttgaaggcctaactttttatataatg
accgagcaagtccacccaagcaagaaatcaaaagcggacctagaggccctcgttaaagcg
aacggaggaaggcttatccagcgcgataccactgccaaagaccttgtcattgttgcagac
aagcggctcatcaaagtcgcttcgcttgaaaagcgcggcacaaataatatcgtcaagccc
atttggctacaggactgcataatgcaaaacgagcgagatgccggtgcaccgccttacctt
ctccctttcgaacctaacagacacatgtactacctccacgacgacgaccaaatggactat
gaggccaatcttgatgataatggagattcatatgcgcgcgatatcactgatgtggatgaa
atgcggaggttgcttgacggggtggaaatcccgaagagcaagttcagccgagatgcattc
ttggaacaacttgaggggcatggagaggatttttcgcagttcaaaacgtacatgtttcag
aacgtcaaggcgaaattctctggggaagtggggtcagaactgagagtaagactggcaaag
aactatgtgaggtttggaggcgggcaggttgcagatggtggggatgaagagggtgtaacg
catgttgttgtagcagatggccaaacttcagcagcaaaggggaaagcgagggtcaatggc
cttgctcgcgtagtcggactgggatggattgaaaagtgttgggaagaagggactcgtatc
gacgaggagagattccaatggggttga
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