Piliocolobus tephrosceles (Ugandan red Colobus): 111537568
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Entry
111537568 CDS
T07491
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain
KO
K06236
collagen type I alpha
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh04151
PI3K-Akt signaling pathway
pteh04510
Focal adhesion
pteh04512
ECM-receptor interaction
pteh04611
Platelet activation
pteh04820
Cytoskeleton in muscle cells
pteh04926
Relaxin signaling pathway
pteh04933
AGE-RAGE signaling pathway in diabetic complications
pteh04974
Protein digestion and absorption
pteh05146
Amoebiasis
pteh05165
Human papillomavirus infection
pteh05205
Proteoglycans in cancer
pteh05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
111537568 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111537568 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111537568 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
111537568 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
111537568 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
111537568 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
111537568 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
111537568 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
111537568 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
111537568 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
111537568 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
111537568 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pteh00536
]
111537568 (COL1A1)
Glycosaminoglycan binding proteins [BR:
pteh00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111537568 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
111537568
NCBI-ProteinID:
XP_023060211
Ensembl:
ENSPTEG00000034933
LinkDB
All DBs
Position
16:44292344..44310713
Genome browser
AA seq
1464 aa
AA seq
DB search
MFSFVDLRLLLLLAATALLTHGQEEGQVEGQDEDIPPITCVQNGLRYHDRDVWKPEPCRI
CVCDNGKVLCDDVICDETKNCPGAEVPEGECCPVCPDGSESPTDQETTGVEGPKGDTGPR
GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGP
MGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGR
PGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQ
MGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGA
RGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGP
QGPSGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGL
PGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGL
TGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGV
PGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGE
QGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGS
QGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGD
KGETGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGP
PGPAGPAGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGAPGPPGP
AGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGV
VGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGA
EGSPGRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGP
VGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGP
RGPPGSAGTPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSF
LPQPPQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCR
DLKMCHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPSVAQKNWYISKNPKD
KRHVWFGESMTDGFQFEYGGEGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQ
TGNLKKALLLQGSNEIEIRAEGNSRFTYSVTVDGCTSHTGAWGKTVIEYKTTKTSRLPII
DVAPLDVGAPDQEFGFDVGPVCFL
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg
cacggccaagaggaaggccaagtcgagggccaagacgaagacatcccaccaatcacttgc
gtacagaacggcctcaggtaccatgatcgagacgtgtggaaacccgagccctgccggatc
tgcgtctgtgacaacggcaaggtgttgtgcgatgacgtgatctgtgacgagaccaagaac
tgccccggcgccgaagtccccgagggcgagtgctgtcccgtctgccccgacggctcagaa
tcacccaccgaccaagaaaccaccggcgtcgagggacctaagggagacactggcccccga
ggtccaaggggacccgcaggcccccctggccgagatggcatccctggacagcctggactt
cccggaccccccggaccccccggacctcccggaccccctggcctcggaggaaacttcgct
ccccagttgtcttatggctatgatgagaaatcaaccggaggaatttccgtgcctggtccc
atgggtccctctggtccccgtggtctccctggcccccctggtgcacctggtcctcaaggc
ttccaaggtccccctggtgagcctggcgagcctggagcttcaggtcccatgggtccccga
ggtccccctggcccccctggaaagaacggagatgatggggaagctggaaaacctggtcgt
cctggtgagcgtgggcctcctgggcctcagggtgctcgaggattgcccggaacagctggt
ctccctggaatgaagggacacagaggtttcagtggtttggatggtgccaagggagatgct
ggtcctgctggtcccaagggtgagcctggcagccctggtgaaaatggagctcctggtcag
atgggcccccgtggtctgcctggtgagagaggtcgccctggagcccctggccctgctggt
gctcgcggaaacgatggtgctactggtgctgccggaccccctggtcctaccggccccgct
ggtcctcctggcttccctggtgctgttggtgctaagggcgaagctggtccccaaggtgcc
cgaggctctgaaggtccccagggtgtgcgtggtgagcctggcccccctggccctgctggc
gctgctggccctgctggaaaccctggtgctgatggacagcctggcgctaaaggtgccaat
ggtgctcctggtattgctggtgctcctggcttccctggtgcccgaggcccctctggaccc
cagggccccagcggccctcccggtcccaagggtaacagcggtgaacctggtgctcccggc
agcaaaggagacactggtgctaagggagaacccggccccgttggtgttcaaggacctcct
ggccctgctggagaggaaggaaagcgaggagctcgaggtgaacccggacccactggcctg
cctggaccccctggcgagcgtggtggacctggtagccgtggtttccctggtgcagatggt
gttgctggtcccaagggtcccgctggtgaacgtggttctcctggccctgctggccccaaa
ggatctcctggtgaagctggtcgtcccggtgaagctggtctgcctggtgccaagggtctg
actgggagccctggcagccctggtcctgatggcaaaactggcccccctggtcccgccggt
caagatggtcgccccggacccccaggcccccctggtgcccgtggtcaggctggtgtgatg
ggattccctggacctaaaggtgctgctggagagcccggcaaggctggagagcgaggtgtt
cccggaccccctggcgctgtcggtcctgctggcaaagatggagaggctggagctcaggga
cccccaggccctgctggtcccgctggtgagagaggcgaacaaggccctgctggctccccc
ggattccagggtctccctggccccgctggtcctcccggtgaagcaggcaaacctggtgaa
cagggtgttcctggagaccttggtgcccccggcccctctggagcaagaggcgagagagga
ttccctggcgagcgtggtgtgcaaggtccccctggtcctgctggtccccgaggggccaat
ggtgctcccggcaatgatggtgctaagggtgatgctggtgcccctggagctcccggtagc
cagggcgcccctggccttcagggaatgcctggtgaacgtggtgcagctggtcttccaggg
cctaagggtgacagaggtgatgctggtcccaaaggtgctgacggctctcctggcaaagac
ggcgtccgtggtctgactggccccattggccctcctggtcctgctggtgcccctggtgac
aagggtgaaactggtcccagcggccctgctggtcccactggagctcgtggtgcccccgga
gaccgtggtgagcctggtccccccggccctgctggctttgctggcccccctggtgctgat
ggccaacccggtgctaaaggcgaacctggtgatgctggtgctaaaggcgatgctggtcct
cctggccctgccggacccgctggaccccctggccccattggtaatgttggtgctcctgga
cccaaaggtgctcgtggcagcgctggtccccctggtgctactggtttccctggtgctgct
ggccgagtcggtcctcctggcccctctggaaatgctggagcccctggccctcctggtcct
gctggcaaagaaggcggcaaaggtccccgtggtgagactggccctgctggacgtcctggt
gaagttggtccccctggtccccctggccccgctggcgagaaaggatcccctggtgctgat
gggcctgctggtgctcctggtactcccgggcctcaaggtattgctggacagcgtggtgtg
gtcggcctgcctggtcagagaggagaaagaggcttccctggtcttcctggcccctctggt
gaacctggcaaacaaggtccctctggagcaagtggtgaacgtggtccccctggtcccatg
ggcccccctggattggccggaccccctggtgaatctggacgtgagggagctcctggtgcc
gaaggttcccctggacgagatggttctcctggccccaagggtgaccgtggtgagactggc
cccgctggacctcctggtgctcctggtgctcctggcgcccctggccccgttggccctgct
ggcaagagtggtgatcgtggtgagactggtcctgccggtcccgctggtcctgtcggccct
gttggcgcccgtggccccgctggaccccaaggcccccgtggtgacaagggtgagacaggc
gaacagggcgacagaggcataaagggtcaccgtggcttctctggcctccagggtccccct
ggccctcctggctctcctggcgaacaaggtccctctggagcctctggtcctgctggtccc
cgaggtccccctggctctgctggtactcctggcaaagatggactcaacggcctccctggc
cccattgggccccctggtcctcgcggtcgcactggtgatgctggtcctgttggtccccct
ggccctcccggccctcctggtccccctggtcctcccagcggtggtttcgacttcagcttc
ctgccccagccacctcaagagaaggctcacgatggcggccgctactaccgggctgatgat
gccaatgtggttcgtgaccgtgacctcgaggtggacaccaccctcaagagcctgagccag
cagatcgagaacatccggagccccgagggcagccgcaagaaccccgcccgcacctgccgc
gacctcaagatgtgccactctgactggaagagcggagagtactggattgaccccaaccaa
ggctgcaacctggatgccatcaaagtcttctgcaacatggagactggtgagacctgcgtg
taccccactcagcccagtgtggcccagaagaactggtatatcagcaagaaccccaaggac
aagaggcacgtctggttcggcgagagcatgaccgacggattccagttcgagtatggcggc
gagggctccgaccctgccgacgtggccatccagctgaccttcctgcgcctgatgtccacc
gaggcctcccagaacatcacctaccactgcaagaacagtgtggcctacatggaccagcag
actggcaacctcaagaaggccctgctcctccagggctccaacgagatcgagatccgcgcc
gagggcaacagtcgcttcacctacagcgtcactgtcgatggctgcacgagtcacaccgga
gcctggggcaagacagtgatcgaatacaaaaccaccaagacctctcgcctgcccatcatc
gatgtggcccccttggacgttggtgccccagaccaggaattcggcttcgatgttggccct
gtctgcttcctgtaa
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