Parasteatoda tepidariorum (common house spider): 107446555
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Entry
107446555 CDS
T06106
Name
(RefSeq) probable ATP-dependent RNA helicase DDX23
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107446555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptep03041
]
107446555
Enzymes [BR:
ptep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107446555
Spliceosome [BR:
ptep03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107446555
Complex C
U5 SnRNP specific factors
107446555
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
107446555
NCBI-ProteinID:
XP_015916717
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MDYNDKSRNLDYNNDKTRIEHNDKSRTDYNDKSRSLERGSDRSRSEKRRRSRSHSPRRHK
RSRSRERRSRSRSRDRHRHKERERDKERRDKKKDKSKDKSRQKDRKDKNNIKEEDEDGKN
DKVKKEPLSLEELMAKKQAEEMARSKPVFLTKEQRAAEALKRRQKEVEEQRKRMDEERKI
RMQFMEEAKHSQENDKERERRERREKREAEEALASAAAAAAANESDRDKVRELKDKEKEL
EAIRERYLGLIKKKRRVRRLNDRKFVFDWDASEDTAVDYNPIYKERHTVQFFGRGHVAGI
DLKSQKKEQSKFYGELLELRRTHAEKEQEIVRLKKIKKKEDKQKWDDRHWSQKSIEEMTE
RDWRIFREDFNIAIKGGRIPNPIRNWKESGLTKPILEIIEQLGYKDPTPIQRQAIPIGLQ
NRDIIGVAETGSGKTLAFLIPLLVWITSLPKIERNEDIDQGPYAIIMAPTRELAQQIEEE
TIKFAKTLEIRTVAVIGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNRCTYIV
LDEADRMIDMGFEPDVQKILEYMPVTNQKPDTDEAEDEKILLANFNSKNKFRQTVMFTAT
MPPAVERLARSYLRRPSIVYIGSAGKPVERVEQIVYVISENIKRKKLLEILEEGVEPPVI
IFVNQKKGADVLAKGLEKMGYNACTLHGGKGQEQREYALASLKTGSKDILVATDVAGRGI
DIQNVSMVINYDMAKSIEDYTHRIGRTGRAGKHGIAVTLITKEDSHLFYDLKQLIMTSPI
STCPPELANHPDAQHKPGTVITKKRREEKIFA
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggattataatgacaaaagccgcaatttagattataataatgacaaaactcggattgag
cataatgacaaaagtcgaactgattataatgacaaaagtcgtagtctggaaagaggatct
gatcgatcaagatctgaaaaaaggcgaagatcaagatcccacagtcctcgtcgtcataag
cgttctcgaagtagagaaagaaggtcacgatccagaagcagagaccgccacaggcataaa
gaaagggaacgtgataaagagagaagagacaaaaagaaagataaatccaaagataagtct
aggcaaaaagatcgcaaagataaaaataacattaaagaagaagatgaagatggtaaaaat
gataaagttaagaaagagcctctttcccttgaagaacttatggcaaaaaagcaagctgag
gaaatggcaaggagcaagcctgtatttctaacgaaagagcagcgagctgctgaagcccta
aaaaggaggcaaaaagaggtggaggaacaaaggaagagaatggatgaggaaagaaaaatt
cgaatgcagtttatggaagaggccaaacattctcaagaaaatgataaggagcgggaacga
cgagaaagaagagaaaaacgtgaagcggaagaagcattagcatcagctgctgcagctgca
gcagctaatgaatctgatagagataaagtcagagaattgaaagacaaagaaaaagaattg
gaagctatacgcgaaaggtatttaggtttgataaaaaagaagagacgtgttcgacgtttg
aatgacagaaaatttgtgtttgattgggatgcctcagaagatactgctgtagattacaac
cctatttataaagaaagacatactgtgcagttctttgggagaggccatgttgctggaata
gatttgaaatctcagaagaaagaacagtctaaattctatggagaacttttagaattaaga
agaactcatgcagaaaaggaacaagaaattgttcgcttaaagaaaatcaaaaagaaagaa
gacaaacagaaatgggatgatcgtcattggtctcaaaagtccattgaggaaatgacggaa
agagactggagaatctttagggaagatttcaacattgcaattaaaggtggacgtatacca
aatcccattagaaattggaaagaatctggtctgacaaaacctattttagagattatcgag
cagttaggatataaggatcctactcctattcagagacaagctataccaattggtttgcaa
aatcgagatatcattggtgttgctgaaactggcagtggtaaaactctagctttcttgata
ccactattagtttggataacttcactgcctaaaattgaaagaaatgaggatattgaccag
ggtccatatgcaataataatggcacccacacgtgagttggctcagcagattgaagaggaa
acaatcaaatttgcgaaaacgctagaaattagaacagtagctgtgattggtggtttgtcc
agagaagaacaaggatttcgtttgcggctgggctgtgagatagttattgctactcctggt
cgattgatagatgttttggaaaatagatatttagtcctcaacagatgtacttacatagtt
cttgatgaggctgatcgtatgattgatatgggttttgaaccagatgtccagaaaatttta
gaatatatgccagtgaccaaccagaaaccagatactgatgaagctgaagatgagaagata
ctgttggccaactttaattctaaaaataaattccgtcagacagtgatgtttacagcaact
atgccaccggcagtagaaagattagccagatcgtacttacgaaggccttccattgtctat
attggttctgctggaaagcctgtagaaagagtagaacaaatagtatatgtaatcagtgaa
aatataaaaaggaaaaagttattggaaatattggaagaaggtgtggaaccacctgtcatt
atttttgtcaaccaaaagaaaggtgctgatgtattggctaaaggtcttgaaaaaatggga
tacaatgcatgcactcttcatggtggtaaaggtcaagaacagagagagtatgccttggcc
agcctcaagactggatcaaaagacattcttgtcgctaccgatgttgctggaagaggtatc
gacattcagaatgtgtccatggtcatcaattatgacatggctaaaagcattgaagattac
actcacagaattggtcgtactggtcgtgcagggaaacatggtattgctgtcacattaata
actaaagaggattctcaccttttctacgatttgaaacaactcataatgactagccctatt
tcaacttgtccaccagaacttgcaaatcacccggatgctcaacataaacctggaacagtt
atcacaaagaagcgtcgtgaagagaaaatctttgcataa
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