Parasteatoda tepidariorum (common house spider): 107455385
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Entry
107455385 CDS
T06106
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107455385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptep03019
]
107455385
Messenger RNA biogenesis [BR:
ptep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
107455385
U7-dependent histone pre-mRNA processing factors
107455385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_occluded
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
107455385
NCBI-ProteinID:
XP_015928410
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MTAMQGALSAAERSMRSVFVGNIPYEATEEQLKDIFAEVGPVVSFRLVYDRETGKPKGYG
FCEYKDQEMALSAMRNLNGYELNGRALRVDNAASEKSKEELKNLQASLGGPPVESPYGPE
ISGDQAPDAIAKIMSSLPPEQLYELMIQMKVCIENNPNEARILLMQNPQLCYALLQAQVI
MKLVDPIQAKTMLHAQNPFTLSASALLPTPEGKTNATQAPTHSAFSTPQYLKNVPGINEG
PQFAPAIPMDAPGSSPIPPNTAAGPQRPPPHNVSPARPSLLPAPAAGPNQYPDRGMNPRS
LGDHDLRQMPMVDRDMRGPPVMGGDKDMRHQAVDEDFRGMGGPGRMPDNRYSNNPGMPHG
DIRNMPSSDMRNMPPGDMRGRSAAHPGDMRNMPPGDMRNMPSNDMHRMPQSRGMPSHDPH
PSAGGRNMPPMDSRNIPNPGGRNIPPVDARGMPMGDHGNRGPHFDRPMGPGRMDDHIPPM
NPNAATARPLQNPRLNAVGGNSPAVGGASPSPASSSRSNNQALAAAAAAIAPHDQEKAAL
IMQVLQLSDQQIAMLPPEQRQSILILKEQIARSTQAS
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgactgctatgcaaggagcattatcagcggctgaaagatctatgcgatctgtgtttgtg
gggaacattccatatgaagccactgaagaacaattaaaagatatatttgctgaagtgggt
cctgtcgtaagctttagattagtgtatgatcgagaaacaggaaaaccaaaaggctatgga
ttttgtgaatataaagatcaagaaatggctctcagtgctatgcgtaatttgaatggttat
gaacttaatggcagagctcttcgtgttgataatgctgctagtgaaaaaagtaaagaagaa
ttaaaaaatttgcaagcatcattaggtggcccaccggttgagagcccttatggccctgaa
atatctggagatcaagctcctgatgcaatagcaaaaatcatgagtagtcttcctccagaa
cagttgtatgaacttatgattcaaatgaaggtttgcattgaaaataatcccaacgaagct
cgtattttattaatgcaaaatccacaactgtgttatgctttattacaagctcaggttatt
atgaagctagttgatcccattcaagcaaaaactatgctacatgctcagaacccctttact
ttatcagcatctgcactgttgccaacacctgaagggaaaactaatgctacacaagcacca
acacattctgccttttcaactccacagtacttaaaaaatgttcctggtataaatgaaggt
cctcaatttgcaccagctatacctatggatgcacctggctcttcacctatacctcctaat
actgcagctggtcctcaaaggccacctcctcataatgtgtcacctgcaagaccatctttg
ctaccagctcctgctgctggaccaaatcaatatcctgatagaggtatgaatcctcgatca
cttggcgatcacgatctgaggcagatgcccatggttgacagagatatgcgtggtcctcca
gtgatgggtggagataaagatatgagacatcaagcggttgatgaggactttagaggaatg
ggtgggcctggaagaatgcctgataatcgttactctaataatcctggcatgcctcatggt
gacattcgaaatatgccttccagcgacatgcgcaacatgcctcctggtgacatgcgaggt
agaagcgctgcacatccaggagacatgcgcaacatgccacctggagatatgagaaatatg
ccatctaatgacatgcatcggatgccacaaagtagaggtatgccgtctcatgaccctcat
ccatcagctggtggacgaaatatgcctcctatggactctcgaaatattcccaaccctggt
ggtcgtaatatacctcctgtagatgctcgtggtatgcctatgggggatcatggtaataga
ggaccccatttcgatagaccaatgggtccagggcgaatggatgatcacatacctcctatg
aatcctaatgcagctactgctcggccccttcagaatcccagattaaatgctgttggtggt
aactctcctgcagttggtggggcatctccaagtcctgcttcatcatcccgctctaataat
caggcattagctgcagcagctgctgctatagcgcctcacgaccaagaaaaggctgcttta
ataatgcaagttctgcaactttcggatcagcagatagccatgcttcctccagaacaaagg
caaagcattttgatattaaaagaacaaattgctcgcagtactcaagcatcctaa
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