Puntigrus tetrazona (Sumatra barb): 122326519
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Entry
122326519 CDS
T08985
Name
(RefSeq) low-density lipoprotein receptor-related protein 8-like isoform X1
KO
K20052
low-density lipoprotein receptor-related protein 8
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122326519
Membrane trafficking [BR:
ptet04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
122326519
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
hEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
122326519
NCBI-ProteinID:
XP_043077393
LinkDB
All DBs
Position
2:2083675..2156239
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AA seq
977 aa
AA seq
DB search
MWTEIGKILFFHFLVWESYRAKGAETGAEAECEDGQFQCNNKRCIPTIWRCDDDDDCSDN
SDEENCLKNTCAPSEFACANGQCVPGRWRCDGEPECPDGSDEADATCTVKQTCPPEKFDC
GGKCVSLSWRCDGERDCENGEDEADCAADARSCSAGEFQCRNRKCLAPVYVCDGDDDCGD
GSDEEKCSPPTCGPHEFRCNSSECVPQPWTCDGDPDCADGSDEWAGRCGGGAGRPAPPPA
RRLQCGAGEFRCGSGECVKLAWRCDRDPDCKDKSDEVDCPLLTCRPDEFQCGDGSCIHGI
KQCNKIHDCLDKSDEAGCVNATKCEGPLKFLCRNGECIDGSKVCDNVKDCKDRSDEPKKE
CSLNECLINNGGCSHICVDRPIGYECQCPAGYKLLDKRTCGDIDECENPDACSQTCINLK
GDFKCECHPGYEMDPVSKTCKAEGKSPYLMFTNRHEIRRIDLVKRDYTQVVPTQKNAVAI
DIDVAANRMYWCDRFQHKIYSAYIHEASDPSRHVTLIDSELHSPEGLALDWVQHNLYWTD
SGDRTISVASADGGRRRVLISTDLSEPRAIAVDPERGFMYWSDWGIRARIEKAGMNGVDR
QVLVSEDIEWPNGITLDVVGKRLYWVDSKLHLICSVDLNGAHRRVILSSIERLGHPYALA
VFEDRVYWTDREKEAVYSANRLTGQDVTSLAEHLNDPHDIVVFHELSQPAAPDSCNLSGV
TNGGCDFLCLRAPQISEHSPKYTCACPDGEELSPDTRQCVPVQNETAITPTASINIGNET
GAGRAQESPAAVTSQSDSMAETTLSSLLTSGPEEPAVSSNTTAEHSPTQVSRTTPDSLSN
LSHHSGNELFLLGRNLTVAVLGVVIPIVPIVATVVFGVVCAGVYLVYRNWRRNSTKSMNS
DNPVYRKTTGETEEDEIHIGRTDGLAGHHHPYPGPVVGMTPVGTGTCPPFIALPLGTGLP
DPATHWYTEQPTISSTK
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgtggacagaaattgggaaaatattattttttcattttttagtttgggagtcgtaccgc
gcgaaaggtgctgaaaccggcgccgaggcggagtgcgaggacggacagtttcagtgcaac
aataagagatgcattcccaccatatggagatgcgacgacgatgatgactgctccgacaac
agcgacgaggagaactgcctgaagaacacatgcgctccctcagagtttgcgtgtgcgaat
ggtcagtgtgttcctggacgttggcggtgtgacggagaacccgagtgtccagacgggtcg
gatgaagctgatgccacctgcacagtcaaacagacgtgtccgccggagaagtttgactgc
ggagggaagtgtgtgtctctgtcctggcggtgcgacggcgaaagagactgcgaaaacggt
gaagatgaagcagactgtgcagcagatgccaggtcctgctcggcaggggagttccagtgt
cgtaaccgtaagtgtttagcaccggtctacgtgtgtgacggcgacgacgactgtggagac
ggcagcgacgaggagaagtgctctccacccacctgtgggccgcacgagttccgctgtaac
agctctgagtgtgtgcctcagccctggacctgcgacggagaccctgactgcgctgatggc
tcggatgagtgggcggggcgatgcgggggcggggctggacgaccggctccgccccccgcc
cggagactgcagtgcggtgctggagagttccggtgcggcagcggagagtgtgtgaaactg
gcctggaggtgcgacagggaccctgactgcaaggacaagtcagatgaggtcgactgccct
ctgctcacatgccggcccgatgagttccagtgcggagacggatcctgcatccacggcatc
aagcagtgcaacaaaatacacgactgcctcgacaaaagtgacgaggctggctgtgtcaac
gccacaaagtgtgaaggacctctgaagttcctctgcaggaatggagaatgcattgacggc
agcaaggtgtgtgataatgtgaaggactgcaaggatcggtcagacgagcccaagaaggag
tgcagtttgaatgaatgtttgattaacaatggaggctgctcacacatctgtgtggaccgt
cccatcggatacgagtgccagtgtcccgctggctacaagcttctggacaagaggacatgt
ggagatatcgatgagtgtgagaaccctgatgcttgcagtcagacctgcattaatctgaaa
ggagatttcaagtgtgaatgtcacccgggttatgagatggaccccgtgagcaagacctgc
aaagctgagggaaaaagcccttacctgatgttcacgaacagacacgagatccgacgcatt
gacctggtgaagagggactacacgcaggtggttcccacgcagaagaacgccgtggctatt
gatatcgacgtcgccgccaaccgcatgtactggtgcgaccgctttcaacacaaaatatac
agtgcttacatccacgaggcgagcgacccgtctcgacacgttactctgatcgactccgag
ctgcattcccccgagggcctggctctggactgggtccagcacaacctctactggaccgac
tcgggcgacagaaccatctccgtggcttcagcggatggcggcaggagacgagtgctgatc
agcaccgacctgagcgaaccgcgagccatcgccgtggacccggagagagggttcatgtat
tggtctgactggggcatcagagccaggattgagaaggctggcatgaacggtgttgatcga
caggtgttggtgtctgaggacatcgagtggcccaatggaatcacactcgatgtggttggt
aagcgcttgtactgggtggactcgaaactgcacctgatctgcagcgtggatttaaacggg
gcccatcgcagagtcatcctgtcttccatcgagagactcggacatccgtatgcccttgct
gtgttcgaggatcgcgtgtactggacggaccgtgagaaggaagctgtctacagtgcaaac
agactcacaggacaggatgtgaccagtcttgccgagcacctcaatgaccctcacgacatt
gttgtttttcacgagctgagccagcctgcggctcctgacagctgtaacctgagcggtgtg
actaacggaggctgtgacttcctgtgtctgcgagctcctcagatcagtgaacactcaccc
aaatacacctgtgcttgtcctgatggggaggagctcagccctgacacacgtcagtgtgta
cccgtgcaaaatgagactgcgatcacacctaccgcctctatcaacatcggcaacgagaca
ggggctggccgggcacaagagtctcctgcagctgtgacatctcagtctgacagtatggct
gaaaccactctctcgtcactcctcacctccggcccagaggaaccggccgtctcctctaat
actacagcagagcacagccccacacaagtgtccaggaccacaccagacagcctgagcaac
ctgtctcatcactctggcaatgagttgtttctccttggccgtaatctgacagtggcagtg
ctcggagtcgtaattcccatagttcctattgttgccacagtggtcttcggagtggtgtgt
gccggcgtttacctcgtttaccgcaattggaggaggaacagcaccaaaagcatgaactcc
gacaaccccgtctaccgcaaaaccacgggagagacagaggaggacgagattcacattggt
cggactgacgggctcgctggccatcaccacccttaccccgggcccgtggtcggcatgacg
ccggtcggtacggggacgtgcccgccattcatcgctctgcctctggggaccggtttacca
gaccctgccacacactggtacacagagcagcccaccatctctagtactaagtga
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