Puntigrus tetrazona (Sumatra barb): 122327292
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Entry
122327292 CDS
T08985
Symbol
stab1
Name
(RefSeq) LOW QUALITY PROTEIN: stabilin-1
KO
K19020
stabilin-1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122327292 (stab1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ptet00536
]
122327292 (stab1)
Glycosaminoglycan binding proteins [BR:
ptet00536
]
Hyaluronan
Cell surface receptors
122327292 (stab1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
cEGF
FXa_inhibition
EGF_2
EGF_MSP1_1
EGF
Motif
Other DBs
NCBI-GeneID:
122327292
NCBI-ProteinID:
XP_043078457
LinkDB
All DBs
Position
22:complement(5607044..5634799)
Genome browser
AA seq
2550 aa
AA seq
DB search
MSYLLSLGLMVLWTSHVQAFSNRCNASVTVLHRTPCTSCAASAAVVCPRGSRKITQIPDT
CRYVVEIGRRQVELSGCFHSCQEIKTVQHCCPGFWGPLCLPCPSWSGKMCNGYGTCDSGN
GTCVCNEGYTGFACQNCLKENAYGDQCRSECKCVNGKCKSAPDGDGECQCQPPFSGPKCD
KVSSSCALCPAYSYCKGDETNAVCECLPNYKKIGNACIGVCSQGICDANAKCSFSGGKFR
CECEEGFKGDGQYCLPINPCDSNNGGCPAESTACEFTSPGKSKCVCLPGTVSSDPSKGCA
QRSACAPGSCHVSARCEIDSDGMPSCRCNAQQIGDGRRCYGNLVERVLELDREGSQAGNL
TGSLRFFEQACEFTLRQHGPFTAFIPAGHNSFQMLTGKSSSGVQNAVCKNHLILGQKLYS
DLEGKDMWMYGGEKIRFKTNKHFILMRDPDVLFTILESDIPASNGIIHIIDKPFTLAHIE
SSNNNIEFSSKTIGEIFREDGRFNRFLSLVDNCGVLLPVRGPGPLTVFVPTNTAIDKSRD
GSLMYMLNNAKPKLQMLLKHHMFSLAAVTVDQLASMSEITTMANEILRINASDDGRVFLG
DKGIPLETKDIVASNGIIHLIDGVLIPSSIVPIMPHRCDINGSRISFAPCVRCSHIHETQ
CPPGSVDVGQHLRGCEPIPDRQWSYSLFEEGCAKYCNITEKTPQCCSGFYGPDCKPCIGG
FQHPCYDKGTCFDGINGNGSCKCIPAFTGVACHLCSNPXKHGEQCDEDCRCVHGVCDNRP
GSMGVCRRGSCQGGFSGELCDQTATPCNSDGATEHCHIHAKCVYHNDQTTCVCLPGYEGD
GYTCTKTNPCLQPQRGGCDANAECMYDEGKVNCVCIEGWTGDGRLCVEINNCLSEGRGGC
HENAECTATGPGQNECSCKKGYMGDGIVCKIANPCLSNNGGCHSLAACKLKGPGIRQCVC
RSEYEGDGLTCYGNMLVELDGNSEFYNFNRFLLRHKVIEIHSRVTALIPSKAAFANLSDS
EESFWFDYYRVPHVLQVHFLDGIYTSEDLQKLVGKTVQTIGKTKWEVNSNGRELMIGNAT
ILTPDLKAINGCIHIIDTVLRPAVSDFPPPPPGLMELLNKTPEFSLFKETALLYNLENYI
PTRDYTIFVPNDSAMQEYLKTTNSTQLSLDIVKYHIVIGEQLFPENLGNGIFKNTFLGNG
TQIMFYVDTDNQTMANDVPISGSFTETRHGSVFRIPRVLDLHKNHCSKDVYLKISGLCGD
CEANPKCLYNAKPVQPKFPQNMKSNCKYRTRVGKKRVRVPGCHMECLRTTKDHSCCPGYF
GHDCFKCPGSLDNWCSNNGQCKDGLFGSGECLCNEGFHGTACEMCEPGRYGKDCKSECHC
EHGKCLDGIEGNGQCICFKGWKGGNCSVAVVNDACNGVCDVNANCISGASGAPATCSCVA
GYKGNGTFCKEFDLCTTDNGGCSINANCTKTSPGERSCTCKAGYIGDGVMCLEMDACLVD
NGGCDKNALCMKTGPNRVACACKPGFISQGHRCLAVNPCRKNNGGCSINAVCRYLGDGEH
NCTCYIGYKGDGFNCAGTISRELLRMPEAAWLRRNIGVIRVRDLYSQGPFTVFVPHADYV
ANVSTLQVEKWTNTSHASDLLRYHIVSCEELRESDLKSVKEVATSSGYKLRFSVRNGVVY
INNNTKITTSDVECSNGIIHFIDNVLFPYDITGKADISTDLNITAAANQYGFKIFSKLLQ
DAELMHVVQHQPFYPFTMFWPTDAVFNSLPEDRKKWLYSEDHRDKLQAYLKAHIVRDQRA
VAVALPAEKSMETLFGSELTFSCSKNLIGDILINGNNARIVARNMLFDSGIAHGIDQLLE
PPSIGARCDNFTSTEVKGLCGSCSLPPRCPLGSEDVNRTSICRRPYSPYMYRRPSYYGMY
SYGYGYNSYRDWLGCNRVCSKMTWAVKCCKNHFGRDCQVCPGGLEAPCGQHGDCDDGRTG
SGMCKCHTGFTGTGCELCESNHFGSNCTECNCTSNGRCDGGLDGDGSCFCQEGWTGKYCE
SKIEVKPICSPACDLNAVCLPENNCECVPPYVGNGINCTAPDLCSEYNGGCHETAECSQS
GINVTCSCQAGYSGDGHVCSPINRCVEEANGGCSDFAQCIFTGPNERRCECLTGFVGNGI
QCLEKVVPPVDRCLEDNGGCDPKATCKDLHFHMKTGGVFHLRSSEGKYKLNFSQAQEACE
AEGATLATFKQLSDAQQLGMHLCVAGWMDGKKAGYPIRFPSAKCGDNHVGIVLYKEPVNA
SWPYDAYCYRMKEVSCECKPGYIGNGEFCNGDLASVVASTSNFSVFYTTLLKFAEDGEEG
KNLLKSLSDKSLNITVFVPQNDGFSANKTLSWRDLLYHISSINSLHFYEDLKHNTVIPSR
LGSNLVVMIPSNSTGQAEDSQPQKLVNKKVILAWNIPAINGLIHVIDGPFRAPPVPVPAV
LPISQSSGVAVTTVLIVFAIVGIVAGLAYYILKHKNDAFRFQYFKNDDEDGASTKNPALV
SIPNPLYSGYRAFTEPFGDSAATDTPNLID
NT seq
7653 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcttctcagtttgggactcatggtactgtggacttcacacgttcaggccttc
tctaatcgctgcaatgcgtccgttacagtccttcaccggactccctgcacttcctgcgcc
gcttccgccgccgtcgtctgcccgcgagggtccaggaagatcacccagatccctgatacc
tgcagatacgtggtggaaatcggccgtcgtcaagtggagctgtccgggtgctttcatagc
tgtcaggaaataaagacagtccagcactgctgtcctggcttctgggggcctctgtgcttg
ccttgccctagctggtccggaaagatgtgtaatggttacggcacgtgtgactctggaaat
ggcacctgtgtgtgtaatgagggatatacaggtttcgcgtgccagaattgtttgaaagag
aacgcctacggagaccagtgccgttcagagtgcaagtgtgtgaacggcaagtgcaagtca
gcaccggacggagacggcgaatgtcaatgccagccgccgttttcagggccaaagtgcgat
aaagtgtcttcgtcttgcgcgctctgcccggcctattcgtattgtaagggagacgaaacg
aacgctgtgtgcgaatgtctgccgaattacaagaagatcggaaacgcctgtataggcgtg
tgttcgcaaggaatttgcgatgccaacgcgaagtgttcgtttagcggcgggaagtttcgg
tgcgagtgtgaagagggattcaaaggagacggccaatactgccttcccatcaacccctgc
gactctaataatgggggctgtcctgcagagtccaccgcctgtgagttcacgagcccaggg
aagtcaaaatgcgtttgtttgcccggaacggtgtcgtccgacccgtcgaaggggtgcgca
caaagatcggcctgcgctccgggttcgtgccacgtcagcgcccgctgcgagatcgactca
gacggcatgcctagttgccgctgcaacgctcagcagatcggcgatggcagacgttgctat
ggtaacctcgtggaaagagttctggagctggacagagagggcagtcaggcaggaaacctt
actggaagccttcgcttctttgagcaagcgtgtgagttcactctgaggcagcacggcccg
ttcactgcgttcattcctgcgggacacaattctttccaaatgcttacaggaaaatcctcg
agcggcgtccagaacgcagtgtgcaaaaatcacctcatcctcggacagaaactctactct
gatctggaggggaaagacatgtggatgtacggaggagaaaagatcagattcaaaacaaat
aagcactttatcctgatgagggacccagacgtgttgtttactatacttgagagcgatatc
ccagcatccaacggaataattcatattattgacaagccctttactcttgctcatatcgag
tcttcaaacaacaacattgagttctcctcaaagaccattggagagatttttagagaggat
ggcaggttcaatcgattcctgtctctggttgataattgtggagtcctgttgcctgtcaga
ggtccaggtccgctcacggtgtttgttccaaccaacacagccatagacaaatccagagat
ggaagtcttatgtacatgttaaataatgccaaaccaaagcttcagatgcttctgaaacac
catatgttctccctggccgctgtcactgtggaccagcttgctagcatgtctgagattaca
acgatggccaatgagatcttaaggatcaacgcttctgatgatggaagagttttcctgggc
gataaaggaatacctctcgaaactaaagacattgtcgcatctaatggaatcattcaccta
attgatggagttcttataccttcctctatagttcccataatgccccatcggtgtgacatc
aatgggagcaggatctcttttgctccctgtgtccggtgcagccatatccatgagacacaa
tgtccgcctggaagtgttgatgtgggacagcatttaagaggctgcgaaccaattcctgat
cgccaatggtcgtattccttattcgaggaaggctgtgccaaatactgcaacattactgag
aagacgccacagtgttgcagtggtttctatgggccagactgtaaaccgtgcattgggggt
ttccagcacccgtgttacgataaagggacttgttttgacggcatcaatgggaacggctcc
tgtaaatgtataccagcattcacgggcgtagcctgccacctctgctcaaaccccnaaaaa
catggagagcaatgcgatgaagattgccgctgtgtccatggtgtgtgtgataacaggcct
ggcagtatgggggtgtgtaggagaggatcctgtcagggggggttttcaggggagctttgt
gaccagaccgccaccccctgcaattcagacggtgccactgagcactgccacattcacgct
aaatgcgtctaccacaacgatcaaaccacgtgcgtttgtctgcctggatacgaaggagac
ggttacacctgcactaaaaccaatccctgcctacagcctcagagaggaggctgcgacgcc
aacgccgaatgtatgtacgatgaaggaaaggtgaactgtgtttgtatcgaaggatggaca
ggcgatgggcgtttgtgtgtggaaatcaataactgcctgagtgagggccgtggcggatgt
catgaaaatgctgaatgcacagccactggaccaggacagaatgaatgtagctgcaagaaa
ggctacatgggagacggcatcgtctgcaaaatcgccaacccttgtttgtcaaataacgga
ggctgccattctctggctgcatgtaaattaaagggcccaggaatacgtcagtgtgtgtgc
cggagcgaatatgaaggcgacggactcacatgttacggaaacatgcttgtggaactagat
ggaaattcggaattttataatttcaaccggtttcttctaaggcacaaagtgattgaaatc
cacagccgagtcacagctttgattccgtctaaagccgctttcgcaaacctcagtgattca
gaggagtccttctggttcgattattacagggttcctcacgttctgcaagttcatttttta
gacgggatatacacgtctgaagacttacagaagctggttggtaaaaccgtacagactata
ggaaagactaaatgggaggtcaatagcaacggcagggagctcatgatcggcaatgctacc
atcctcactcctgacctcaaggcaataaatgggtgcattcacatcattgacacggttctc
cggcctgctgtatctgatttccctccacctcctcctggtttgatggagctcctgaacaag
acgccagaatttagccttttcaaggaaacggcactgctttacaacttggaaaactacatc
ccaactagagattacaccatttttgtcccgaatgacagtgccatgcaagagtacctaaaa
acaacaaactcgacacaactgagtctagacatcgtaaaatatcacatagttataggtgag
caactctttcctgaaaacttgggcaatggaattttcaaaaacacgtttttgggaaatggc
actcagatcatgttttatgtggacactgataatcagacaatggccaatgacgttcccata
agcggaagcttcactgagacgaggcatggcagtgtgttcaggatcccacgtgtcttagac
ctccacaagaatcactgcagtaaagatgtgtatttaaagatttctggtctttgtggagat
tgtgaagctaatcctaaatgcctctacaatgccaaacctgtacaaccaaagttccctcaa
aatatgaagtcaaactgtaaatacaggacaagagttggaaaaaagagagtgagagtgcca
ggctgtcacatggagtgcttgagaacaactaaggaccattcctgctgtccaggatacttt
gggcatgattgtttcaaatgtcctgggagtctggataactggtgctcaaacaacggtcag
tgcaaggatgggttgtttggcagtggggagtgtctctgtaacgagggcttccacggaacg
gcctgcgagatgtgtgaacctgggagatatggaaaagactgcaagtctgaatgccactgt
gaacatggtaaatgtttggacggcatagagggaaatgggcagtgcatttgtttcaaaggc
tggaagggagggaattgctctgttgctgtagttaatgacgcctgtaatggagtttgtgat
gtcaatgcaaactgtatctcaggagcttcaggagctccagcaacttgctcctgcgtagct
ggttataagggtaacgggacattttgcaaagaatttgacctatgtaccacggacaacgga
ggatgttccataaatgcaaactgcacaaaaacatcgcctggtgaaaggagctgtacatgt
aaagctggctacattggtgacggggttatgtgtcttgaaatggatgcctgcttagtggac
aatggaggatgtgacaaaaatgccttatgtatgaaaactggaccaaacagggttgcatgc
gcatgtaagcctggctttatttctcaaggtcatagatgtctggcagttaatccttgtcgg
aagaataatggcggctgcagtattaatgctgtttgcagataccttggtgatggggaacat
aattgcacatgctatattggctacaaaggagatggttttaactgtgcagggactatcagt
agagagctgcttcgtatgcctgaggcagcgtggttgagaagaaatattggtgttattaga
gtccgagatctgtacagtcaaggtcctttcactgtatttgtccctcatgctgattatgtg
gcaaatgtttcgactctgcaggttgaaaaatggacaaatacaagtcacgcttcagacctg
ctgaggtaccacatcgtcagttgtgaagaactgcgtgaatcagacctgaaatctgttaaa
gaagtggctaccagtagcggatataaattacgcttcagtgttcgaaatggtgttgtgtat
atcaacaataacacaaagatcaccaccagtgacgttgagtgctccaacggaatcatacat
ttcatagacaatgtcctctttccatatgatataacgggcaaggcagatatcagcaccgat
ttgaacataaccgcagctgccaaccaatatggcttcaaaatcttcagcaagctcctacag
gacgcagaattgatgcatgtggtgcagcatcaacctttttaccctttcaccatgttctgg
ccaacggatgccgtttttaacagtcttcctgaggacagaaagaaatggttgtacagcgaa
gatcatcgcgataagttacaagcctacctcaaagctcacatcgtccgtgaccagagggca
gttgccgttgctcttcctgctgagaaaagcatggaaacattgtttggatctgagctcact
ttcagttgcagtaaaaatttaattggcgacatattaatcaatggaaacaatgccagaatc
gtagcgcggaacatgttgtttgattcaggaatcgctcatgggattgatcagcttctggag
ccaccaagcattggtgcgcgctgcgacaacttcacgagcacagaagtaaagggcctctgc
ggttcctgcagtttgccgccccgttgtcccctcggatcagaggacgtaaacagaactagc
atatgcagacgcccttattcgccttacatgtacagacgccccagttattatgggatgtac
tcgtacggttatggatacaactcctacagagattggcttggctgtaatcgggtatgctcg
aaaatgacatgggctgttaaatgctgtaaaaaccactttggaagagactgtcaagtgtgt
cctggcggactcgaggctccgtgtggacagcatggagactgtgatgacgggcgcactggc
tcagggatgtgtaaatgccacacaggttttacaggcacaggctgcgagttgtgtgaaagc
aatcactttgggtcgaactgcacagaatgtaattgcaccagcaatggcaggtgtgatggc
ggcctggacggcgatggcagctgtttctgtcaagaggggtggacagggaaatactgcgaa
tcaaaaattgaagtcaagccgatttgctcacctgcatgtgatctcaacgcagtgtgcctc
cctgaaaataactgcgagtgtgtgccgccctatgtagggaacggcattaactgcacggcc
ccagatttatgcagcgaatataacggaggctgccacgaaacagctgaatgttcccagagc
ggcatcaatgttacctgttcctgtcaggctgggtactctggagacggacacgtctgctcg
cccatcaaccgatgtgtggaggaggccaacggcggctgcagcgacttcgcacaatgcatt
tttactggacctaacgagaggcgctgcgaatgtctcactgggttcgtgggaaatgggatc
cagtgtttggagaaagtggtgccccctgttgaccgctgcctggaggacaacggcggctgc
gaccccaaagccacgtgcaaagaccttcatttccacatgaaaaccgggggtgttttccac
ctgcgctcgtctgaggggaagtataaactgaatttcagccaagcgcaggaggcttgcgag
gctgagggagctactcttgctacattcaagcagctctctgacgcccaacagttgggaatg
catctatgtgtggcaggatggatggacgggaaaaaagctggctatccaatccggtttcct
tctgctaaatgcggagacaatcatgttggtatcgttctgtacaaagagccagtcaatgcc
agctggccgtatgacgcgtactgctacagaatgaaggaggtatcttgtgaatgtaaacct
ggatacattggaaacggggaattctgtaacggagacttagcttcggttgttgccagcact
tccaatttttcagtgttttacacaactttactgaagtttgcagaggatggtgaggagggc
aagaacctgctgaagtccctgtctgacaaatcgttaaacataacagttttcgtacctcaa
aacgacggtttctctgccaacaagaccttatcatggagggatttgctgtatcatatatcc
agcatcaatagtctgcacttctatgaggatctgaagcacaacaccgtaatcccgtcccgc
ctgggctctaatctagtcgtgatgattccttccaattctactggtcaggctgaggactcg
caaccacagaaattggtgaataagaaggtcatattggcgtggaacattccagccatcaac
ggtctgattcatgtcattgatgggcctttcagagctccacctgttccggtgccagccgtt
cttccaatctcacagtccagcggggtcgcagtcaccactgtgttgattgtctttgctata
gttggtattgttgctggactcgcatactacatcctcaagcacaagaacgacgcctttcgc
ttccagtattttaagaatgatgatgaagacggtgcttccacaaaaaaccctgctttagta
tccatcccaaaccctttatacagtggctacagggcatttacagagccattcggggattca
gctgctacagacacaccaaacctcattgactag
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integrated database retrieval system
