Puntigrus tetrazona (Sumatra barb): 122329546
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Entry
122329546 CDS
T08985
Symbol
lmx1al
Name
(RefSeq) LIM homeobox transcription factor 1-alpha
KO
K09371
LIM homeobox transcription factor 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122329546 (lmx1al)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
122329546 (lmx1al)
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
CRF1
Motif
Other DBs
NCBI-GeneID:
122329546
NCBI-ProteinID:
XP_043081774
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Position
3:9043438..9064147
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AA seq
406 aa
AA seq
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MLPTEISGGVCFSTSQHSKEGRNGMKTEENQSCLQQAPSATPYEHVGGGEVCAGCESPIA
DRFLLRVNELSWHETCVKCAVCRSALSGTCYCRDRLLYCKHDYEKLFVRKCSACLQAIGR
SELIMRVLGQVYHLGCFSCCECERRLQRGDEFVLKEGQLLCRGDYEKEREMLAAISPAPT
ESVKSEDEDGGGVSVGGKAGDDGKEHKRSKRPRTILTTQQRRAFKASFEVSSKPCRKVRE
TLAAETGLTVRVVQVWFQNQRAKMKKIARRQQQQQQQQEQEQMGGTRRGPSRGGRQSNDD
SEDGSSSHGLDGLLSYSSLPRQQLLALDPNIYGSEQFRHGLTPPQLGPEQMHSYDSETVF
HDLDSDGSLSHLGDCLLSTAEAGVLAGRIGNPIDRLYSMQNSYFTS
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgttaccaacagaaatctcaggaggagtgtgttttagcaccagtcagcactccaaagaa
ggaaggaacgggatgaaaacggaagaaaaccaatcatgtcttcagcaggccccctccgcc
acgccttacgagcacgtgggaggaggtgaggtgtgcgcggggtgcgagtctcccatcgcg
gaccgcttcctgctgcgcgtcaatgagctgtcctggcacgagacgtgcgtcaagtgcgcg
gtgtgtcgcagcgcgctgagcgggacctgctactgtcgcgaccgcttgctctactgcaag
cacgattacgagaagttgtttgtgcggaagtgcagtgcctgtctgcaggcgatcggccgc
tcggagctcatcatgcgtgtgctgggacaggtgtaccacctgggctgcttcagctgctgc
gagtgtgagcgtcggctgcagagaggtgatgagtttgtgctaaaggagggacagctgctc
tgccggggagactatgagaaggagagagagatgctggctgccatcagtccggcccctact
gagtcagtaaaaagtgaggatgaggatggcggtggcgtctctgttgggggaaaggccggg
gatgatgggaaggagcacaagagatccaagagaccacgtaccatcctgaccacacaacag
cggcgcgcctttaaggcttcctttgaggtgtcttccaaaccctgcagaaaggtcagagaa
actctggctgctgagactggactgacggtgagagtcgtgcaggtgtggttccaaaatcag
agagcaaagatgaagaagatcgctcgcagacaacagcagcagcagcaacagcaagaacag
gagcagatgggcgggaccaggaggggcccgagcagagggggccgccagagtaacgatgac
agcgaggatggctctagcagtcacggactggacggcctgctctcctattcctctctgcca
cgtcaacaactgctggctttggatcccaacatatacggtagcgagcagttccgacacggc
ctcacgccaccgcagctaggccccgagcagatgcactcctacgactcagagacagttttc
cacgacttggacagcgatgggagcctcagtcatctcggggactgtctcttgtcgaccgcc
gaggctggagttctggcggggcggataggaaatcccatcgatcgcctctactcgatgcaa
aactcctactttacctcatga
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