Puntigrus tetrazona (Sumatra barb): 122331048
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Entry
122331048 CDS
T08985
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04350
TGF-beta signaling pathway
ptet04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122331048
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122331048
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
ig
Ig_2
Pur_ac_phosph_N
V-set
Interfer-bind
fn3_2
SusE
Shisa
FAM176
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
122331048
NCBI-ProteinID:
XP_043084412
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Position
25:2130344..2237214
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AA seq
1434 aa
AA seq
DB search
MAERGARLLVFFASLIVLRLGGADKGSGIRGFTPFRFSVEPVDTLAVRGLPAVLNCSAAS
DAPVRVEWKKDGTFLNLVADDRKRQLADGSLLISTVVHSKHNKPDEGVYQCVATIDNLGT
ISSRTARLTVAGLPRFLSQPEGASVRSGGAELLSCEVTEELVPFTRWERDGRPVELDARV
IQLPSGALVISNASQSDAGLYRCSIDGLGPAKTTEEAELQVSADSGVEEKLETLQGPVAV
AKVVGESALLPCVMKGSPVPAIRWTFNDRPVDESHERFAVIGGGSLQIVNLTQEDAGIYV
CQADSGNMTSEIQAELTVHVPPRFLTRPSNTYAQESMDIIFECDVTGSPPPTVKWMKDGD
TVIPSDYFRIVKQHNLQVLGLVKSDEGFYQCLAENDAGNVQASAQLIILDLDVALPSAVP
SLTDATTDRVASSPAERSGPPPSAPRDVVASLVSTRFIKLTWRLPAEPHGENITYSVFYG
LEGTNRERVENTSGPGEMQVTIQNLVPDTKYTFRVVASNANGPGESSSPLTVATQLEVQV
PGPAPNLQVVSAGATSVTLSWDRPVTGNGEIQTYKLFYSEKGRDSEQDMDVTALSYTMTG
LKKFTEYSFRVVAYNKHGPGVSTEDVVVRTLSDVPSAPPQNLTLEVLNSTSIMVRWQPPP
PGTLNGELTGYKLRYRKGLRRADAIEISTTQLFQLIDGLEKGKVYTVRVSGTTVNGTGPT
TEWIAAETFENDLDESQVPGVPSSLHVRPLVNRIVVSWTPPENQDILVRGYKIGYGIGSP
HAHTVTLDYKQRFYSIDNLDPSSHYVITLKAFNNMGEGVPIYNSATTRPQSDPIDPDIDF
YELFNNPYTSAPDPTPMLPPVGVQASVLGHDSVKVSWADNSLAKNQKITDSRYYTIRWKT
NIPANTKYKMANTTSLFHTVTALKPNTLYEFSVMVTKSRRSSTWSMTAHGTTLESTPSSA
PKDVTVISKEGNPRIININWQPPTEANGKITGYIIYYSTDVKAEVHDWVVEPVMGNRLTH
QVQGLTLDTTYYYKIQARNSKGMGPMSDAVQFRTPKAEPSDKMSSDQGLQVKPGHPTLPE
HGLGSNMDKPGITGSQESHILVIVVIVSVGVFTIIAVVVGAVLCTRRSNSHQKKKRAACK
SSSGSHKYKSSSKDLKPPDLWIHHERLELKPMDKSPEPNPVMTETPIPRTAQDPAAEPSH
QRRGHEAEDSVSTLAGRRGARSKMMMPFDSQPSQPVISAHPIHSLDHLHHHHHHYHLPPR
GYLHHQIGLRAPATPSSFSDRSPSAESVRNQPAAPEPPVAPGQPSTTAELQKTEALIEEE
EPPSINPPTAHVRPTHPLKSFAVPAVTVSAHNPPTYETALPSTPLLAQPVPGVKTASIGT
LSRVRAPMAVTVPSAPDQSETSKMLDMAYETDELSEEMAHLEGLMKDLNSITTG
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggggcacggctgctcgtgtttttcgcaagtctaatcgttctccggctc
ggcggtgcggataaaggttctggtattcgaggttttaccccgttcaggttctcagtcgaa
cccgtcgacacgctggccgttcgcggcctccccgctgtcctgaactgctcggccgctagc
gacgctccggtgagggtggaatggaagaaggacgggacgttcctgaacctggtggctgac
gaccggaagcggcagctagcggacgggtctttgctcatcagtacggtggtccactccaaa
cacaataagcctgatgaaggggtgtaccagtgcgtggccaccatcgacaatctgggcacc
atcagcagccggacggcacgactcacagtggcaggactcccgcgcttcctcagtcagccg
gagggagcgtccgtgcgttcgggcggcgccgagctgctgagctgcgaggtgacggaggag
ctggtcccgttcacccgctgggagagggacggccggcccgtggagctggacgccagggtc
atacagctgcccagcggagctctggtcatcagcaacgcctcccagagcgacgccggactc
taccgctgctccatcgacggcctgggaccggccaaaaccacagaggaggccgaactgcag
gtgtctgcagattccggggtcgaagaaaagctggagaccctccagggcccggtcgccgtg
gcgaaggtcgtcggggagagcgcgctgttgccgtgcgtcatgaagggatcccctgtgcca
gcgatccgctggaccttcaacgaccggcccgtcgacgagagccacgagcgcttcgccgtg
attggcggaggaagccttcagatcgtcaacctgacccaagaggatgctgggatatacgtc
tgccaggcggacagcggcaacatgaccagcgagatccaggcggagctcacagtccacgtt
cctccgcggttcttgacaagaccctccaacacttacgctcaggagtccatggacatcatc
tttgagtgtgacgtcaccggctcgccgccgcccaccgtcaagtggatgaaggatggagac
acggtcattcccagtgattatttcaggatagtgaagcagcataacctgcaggttttgggt
ttggtgaaatcagacgaaggcttttatcagtgtttagcggagaacgacgccgggaacgtc
caagcgagcgctcagctcatcatactggatttagacgttgcccttccttctgctgtccct
tcactgaccgatgccactactgaccgtgtagcgtccagcccggccgagcgcagcggccct
cctccgtcggccccgcgggacgtggtggcgtctctggtgtccactcgattcatcaaactg
acctggcgacttcctgccgagccgcacggggagaacatcacctactcggtcttctacggc
ctggaaggcactaacagggagcgtgtggagaacaccagcggcccgggagagatgcaggtc
accatccagaacctcgtccccgacaccaagtacacctttcgggtggtcgcgtccaacgct
aacggcccgggcgagagttcctccccgcttacagtggccacccagcttgaggttcaggtc
ccgggtccggcgcccaatcttcaggtggtctctgccggcgctacctcggtcacgctgagc
tgggacagacccgtcacgggaaacggagagatccagacctacaaactcttctacagcgag
aagggacgggactcggagcaggacatggacgtcacggctctgtcctacaccatgacgggc
ctcaagaagttcacggagtacagtttcagggttgtggcgtacaacaaacacggccccggc
gtctccactgaggatgtggtggtccgaacgctgtctgacgtgcccagcgccccgccgcaa
aacctgaccctggaggtcctgaactcaacgagcatcatggtccgatggcagccgcctccc
cctggcaccctgaacggagagctgacggggtataagctacgctaccggaaaggactgagg
agagcagacgcaatagagatctcaaccacacagctctttcagctcattgacggtctggag
aagggaaaggtttacaccgtgagagtgtcaggcaccaccgtgaacggcacgggcccgacg
accgagtggatcgccgcagagaccttcgagaacgacctggacgagtctcaggtcccagga
gtgccgagttctcttcacgttcgtccgctggtgaaccggatcgtggtgagctggactcct
ccagaaaaccaggacattttagtgcgaggttataaaatcgggtacggcatcggcagtcct
catgcccacacggtcactctagactacaagcagcgtttctacagcatcgataacctcgac
cccagctcccattacgtcatcaccctcaaggccttcaacaacatgggcgaaggcgttccc
atctacaacagcgccaccacgagacctcagtccgaccccatagaccctgatattgatttc
tatgaactctttaataacccgtacacctcagcgcccgaccccactcccatgctgcccccg
gtgggcgtccaggcctccgtcctcggccacgactcggtcaaagtcagctgggccgacaac
tcgctcgccaagaaccagaagatcaccgactccagatactacaccatccgctggaagacc
aacatccccgctaacaccaaatacaagatggcaaacaccacgtctctgtttcatacggta
acggctctgaaacccaacacactttacgagttctccgtgatggtgaccaagagccgcagg
agcagcacctggagcatgacggcccacgggaccacccttgagtccacacccagctctgct
ccgaaggatgtgactgtgatcagtaaagagggaaacccacgaatcatcaacatcaactgg
cagcctccgaccgaagccaacggcaaaatcacagggtacatcatctactacagcaccgac
gtgaaagccgaggtccatgactgggtcgtggagcctgtgatgggaaacagactgacccat
caggttcaggggctgacgctggacactacatactactacaagatccaggccagaaactcc
aaaggcatggggcccatgtcagacgcggtgcagttccgcaccccgaaagctgaaccatcg
gacaaaatgtcaagtgatcaagggctgcaagtcaaacctggtcaccccactttaccggag
cacgggcttggatcaaacatggataaaccaggcatcacgggcagccaggagagtcatatt
ctggtgatcgtggtgatcgtgtctgttggtgtgttcaccatcatcgctgtggtcgtgggg
gccgtcctgtgcacgcggcgctcaaactcccaccagaagaagaagcgtgcggcctgtaag
tccagcagtggctcccacaaatacaagagctcatctaaagacctgaaacctcctgatctg
tggatccatcacgagcgcctggagctcaaacccatggacaaatcccccgagcccaacccg
gtcatgacggagacgcccatccctcggaccgcccaggacccggccgctgagcccagccat
cagagacgaggtcacgaggccgaggacagcgtgtccactttagccggtcggagaggagcg
agatccaaaatgatgatgccgttcgactctcagccttcccagcctgtgattagcgctcac
cccatccattccctcgatcatcttcatcaccatcatcatcactatcacctcccgccgcgt
ggctatcttcatcaccagatcggtctgagagcgcctgccaccccgagctcattctcagac
aggtctccgtctgcagaatctgtgaggaatcagcccgctgcacctgaacctccggttgct
cccggtcagcccagcactacagctgagctccagaagaccgaggcgctgattgaagaggaa
gagcccccgagcataaacccaccgacggcccacgtgcggcccacgcacccgctcaagagc
ttcgccgtgccggccgtcaccgtctccgcccataacccgcccacctacgagaccgcatta
cccagcacccctctgctggcacagccagtgcccggcgtgaagacggcgtccatcgggacg
ctgagtcgagttcgagctcccatggcagtgacggtccccagtgcacctgaccaatcagaa
accagcaagatgctggacatggcgtatgagacggatgagctctcggaggaaatggcccac
ctggaaggtctgatgaaggacctgaactccatcaccacaggctga
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