Puntigrus tetrazona (Sumatra barb): 122345045
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Entry
122345045 CDS
T08985
Symbol
notch1b
Name
(RefSeq) neurogenic locus notch homolog protein 1b
KO
K02599
Notch 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122345045 (notch1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
Ank
EGF_2
NOD
Notch
NODP
Ank_4
Ank_3
Ank_5
DL-JAG_EGF-like
EGF_3
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
122345045
NCBI-ProteinID:
XP_043094722
LinkDB
All DBs
Position
5:19794796..19832854
Genome browser
AA seq
2498 aa
AA seq
DB search
MHLFLVNLILLISLFTLTQGLECSEKCQNGGTCEPTAEGRGECKCPDLFAGTACQFRNPC
FQSPCRNGGVCRLITSANKVDFVCNCSLGYTDRLCLTPTNNVCLSSPCRNGGTCELTSIH
SYKCKCPPGWSGKNCHQADPCASNPCANGGKCSPFDSDYICHCTPFFSGQTCKQDVNECA
QSPSPCKNGGVCENEVGTYRCNCPAEYTGRHCETLYQPCNPSPCYYGGTCVQKGETSYEC
SCLPGFSGQNCEENIDDCPDHRCLNGGTCVDGVNTYNCRCKPEWTGQFCTEDVNECDLMP
NSCQNGGTCLNTQGGYNCVCVNGWTGDDCSENIDDCADAACHTGATCHDRVASFLCECPH
GRTGLLCHLDDACISNPCQKGSNCDTNPVNGKAICTCPLGYVGPACDQDVDECSLGANPC
EHAGRCINTKGSFQCKCLQGYVGARCELDINECISNPCQNDATCLDQIGGFHCICMPGYE
GVFCQINTDECASMPCLNNGKCIDKINNYQCECPTGFSGSQCQFDIDECASTPSKNGAKC
IDGPNMYTCQCAEGYTGQHCETDVDECLSNPCHYGTCKDGLASFTCMCRAGFTGRLCEIN
INECLSQPCQNGGTCQDRENAYLCICPKGTTGANCEINLDDCQSNPCDFGRCIDKINGYE
CACEPGYTGKMCNINIDECANNPCHNGGTCVDGVNGFTCLCREGYHDTTCQSQLNECLSN
PCIHGHCEDKVNGYNCICDSGWSGVNCDINNNECESNPCMNGGTCKDMTSGYVCTCRAGF
SGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGENCETLLAPCSSKPCKNGGV
CKESEDYESFSCVCPEGWQGQTCEVDINECVKNPCRNDAICQNSIGSYKCSCKSGYTGRN
CETDIDDCKPNPCSNGGFCKDAVNAFTCTCLPGFRGSRCEEDINECDSNPCKNGANCTDC
VNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCPTGFTGNYCQHDIN
ECDSRPCLNGGTCQDSYGTYKCTCPQGYHGHNCQELVNWCKPSPCKNGGICRQSGTKYSC
QCQTGWTGLYCDVPSVSCEVAAKQQGVEVARLCRNSGQCLDAGNTHYCHCQAGYTGSYCE
EQVDECIPNPCQNGATCTDYLGGYSCECVPGYHGVNCSDEINECLSQPCQNGGTCIDLIN
TYKCSCPRGTQGVHCEINIDDCTPFTDPVTQEPKCFNQGRCVDRVGGYHCICLAGYVGER
CEGDVNECLSNPCDPRGTHSCIQLTNNYRCECRTGYTGQRCDKVFDGCKGKPCRNGGTCA
VASNTPHGFICKCPPGFTGSTCEYDAHACGTLHCKNGGTCVSGQKSPKCLCTPAFTGPEC
QYPTEGHCTTNPCYNGGTCEYISEAPYYHCICPTDFNGLFCHILDFSFPGGPARDITPAP
KVTVSCEIAECENKKSNKICDGACNNYACDWDGGDCSLNFNDPWQNCSGALQCWRYFNNG
KCDEQCHNAGCLYDGFDCQRLEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLDCAS
NIPEKLAAGLLVVVVHILPDQLRNNSFGFLRELSRVLHTNVVFRHDSKGEEMIYPYYGNE
QELRKHNIKRSLDGWDDASSNVLSSVKSSIYNIVVEGGRKRRELDEMQIKGSVVYLEIDN
RQCYQQTSECFQNANDVAAFLGALASSGNLNMPYVIEAVTSKIDGPSPIELYPVYVVLAG
LALLAFVAVGMVASRKRRREHGQLWFPEGFKTSEPSKKKRREPVGEDSVGLRPLKNCSDI
SLMDDNQNEWGEEETSDTKRFRSEEQAMLDLDHQPDHRQWTQQHLDAADLRIPSIAPTPP
QGEIENDCMDVNARGPDGFTPLMIASCSGGGLETGNSEEEEDASANVINDFIYQGANLHN
QTDRTGETALHLAARYARSDAAKRLLEASADANIQDNMGRTPLHAAVAADAQGVFQILIR
NRATDLDARMHDGTTPLILAARLAVEGMVEELINCHADVNAIDDSGKSALHWAAAVNNVD
AAMVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLEHFANREITDHMDRLPRDIAQ
DRMHHDIVRLIDEYNLVRSPPMHSAPLCTTLSPPLCSPNAFMGSMKPSVQSKKPRKPSIK
GIGCKDGKDMKVKKKKAQDGKGHLLDSSAVLSPVDSLESPHGYISDVASPPLMTSPFQQS
PSMSLNHLQGIADTHMGVNHLGMGNKQDLAHIQFDPLPPRLTHLPVAGSNGSNIMNGQCE
WLGRMHNSMGPQNQFGAMRNASGQASLHQQGLMTSLHNSRPATLSQMMNYQSLQNTHLST
QPHLMQQIQQNMQQRPQQTNVQLQHQSSNPAGGVSQNLLGGELGGPELQQSAGNSMPIHT
IIPQETQLLNPTSLGPSMAGTQFLTPPSQHSYTAPMDANTPSHQLQVPDHPFLTPSPGSP
DQWSSSSPHSNMSDWSEGISSPPTSMQSQIGHIPEQFK
NT seq
7497 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttttcctcgtgaatctaattcttctgatatcactctttactttgactcaaggc
ctggaatgctcagaaaaatgccaaaatggtggtacgtgtgaacctactgcagaaggcagg
ggagaatgcaagtgtcccgatttgtttgccggcacggcgtgtcagttccgcaatccttgc
tttcagtctccgtgcagaaatggcggcgtgtgtcgcttgattacttctgccaataaggtt
gactttgtgtgcaactgcagcctgggctacacggaccgactgtgtctcactcccaccaat
aatgtgtgccttagctccccttgccgaaacggaggcacgtgtgaactcaccagcatccac
agttacaagtgtaaatgcccaccaggctggtcaggtaagaactgccatcaggctgatcct
tgtgcctcaaatccatgtgccaatggcggtaagtgtagtccctttgattccgactacatc
tgccactgcacacccttcttctcaggccaaacctgtaaacaagacgtcaacgagtgtgcc
cagagtccctctccttgcaagaacggtggagtgtgtgagaacgaggtgggcacgtatcgc
tgcaactgtcctgcagagtacaccgggagacattgcgagactctctatcagccctgtaac
ccttcaccatgctactacggaggcacctgcgtacagaagggagagacgagctatgagtgc
tcctgtttgccaggcttcagtggtcaaaactgtgaagagaacattgatgactgtccagac
catcgttgccttaacggaggaacctgtgtggatggagtgaacacctacaactgccggtgc
aagccagagtggacaggtcagttctgtaccgaagatgtcaacgagtgcgacttgatgccc
aattcctgccagaatggtggtacatgcttgaacacacagggtggatacaactgtgtctgt
gtaaacgggtggacaggggatgactgcagtgaaaacattgatgactgcgcagatgcagcc
tgccacacaggagccacatgtcatgatcgggtggcctccttcctctgtgaatgccctcat
gggcgcacaggtctgctgtgtcacctggacgacgcttgcattagtaacccatgtcagaaa
ggctccaactgtgacaccaatccagtcaacggcaaggccatatgtacctgtcctctgggt
tacgttggcccagcctgtgaccaagacgttgacgaatgttctctgggtgcaaacccttgc
gaacatgctggaaggtgtataaacacaaaaggctccttccagtgtaaatgtctgcaggga
tatgtgggagctcgatgcgaactggacataaacgaatgcatttccaacccttgccagaat
gacgctacttgtctggatcaaatcggaggcttccattgcatctgtatgccaggttacgag
ggagtcttctgtcagatcaatactgatgagtgcgccagcatgccctgcctcaacaatggg
aagtgcatcgacaagatcaacaactaccaatgcgagtgccccacaggattctcgggcagt
cagtgccagtttgacatcgatgagtgcgctagcacccccagcaaaaatggggccaagtgt
atcgatgggcccaacatgtacacctgccagtgcgctgaaggatacaccgggcagcattgc
gaaacagatgtagatgagtgtctatccaacccgtgtcactacggcacatgtaaagacggc
ctggcgtccttcacctgcatgtgccgtgctggttttacgggccgtctgtgtgagatcaac
attaatgagtgtctcagtcagccgtgccaaaatggaggcacctgccaggaccgtgagaat
gcctacttatgcatctgccctaaaggaaccacaggtgctaattgtgagattaacctagac
gactgtcaaagcaatccctgtgattttggaagatgcattgacaagataaatggttacgag
tgtgcctgtgaaccgggatacacagggaaaatgtgtaacatcaacattgatgagtgtgcc
aacaacccctgtcacaatggtggaacctgcgtcgatggagtcaatggctttacgtgtctg
tgcagagaggggtatcacgacacgacctgccagtcacagctcaacgaatgccttagcaac
ccctgcatacatggacactgtgaagacaaagtcaatggatataactgcatttgtgactct
ggctggagtggtgtcaactgtgacatcaataacaatgagtgtgagtccaacccctgtatg
aatggaggcacctgtaaggacatgaccagcggctacgtctgcacttgccgtgctggcttc
agcggtcccaactgccaaacaaatattaatgaatgcgcctccaacccttgcctaaatcaa
ggaacctgtattgatgacgtggctggatacaaatgcaactgtttgctgccttacaccggt
gagaactgtgaaacccttttggctccatgtagctctaaaccctgtaaaaatggaggcgtt
tgtaaggaatccgaagactatgagagcttctcttgtgtgtgtcctgaaggatggcaaggc
caaacatgcgaagtggatatcaacgaatgtgtgaaaaacccttgtcgaaatgacgccatc
tgtcaaaactctatcggcagctacaaatgcagttgcaaatctggctacacaggccgcaac
tgtgagacagacattgacgactgcaagcccaacccttgcagtaacggtggcttctgcaaa
gacgccgtgaatgccttcacttgcacctgcctaccaggtttccgggggagcagatgcgag
gaagacattaatgaatgtgacagtaacccatgtaaaaatggcgcgaactgcactgattgt
gtgaacagttacacctgtacctgtccatctggattcagtgggattcactgcgagaacaac
acacctgactgcactgagagctcttgttttaatggcggcacatgtgtggatggcatcaac
agtttcacttgcttgtgcccgacggggttcactggaaactactgccagcatgacatcaac
gagtgtgactccagaccctgcctgaatggaggcacttgtcaggacagctacggcacatac
aagtgcacctgccctcagggataccatggccataactgccaggagctggtgaactggtgt
aagccgtctccctgtaagaatggaggcatctgcagacagagcggcactaaatacagctgc
cagtgtcagacaggctggactggtttatactgcgacgtcccaagcgtttcttgcgaggtg
gccgccaaacagcaaggtgtggaggtggcccggctgtgtcgtaactctggccagtgtctg
gatgctggaaacacacactactgtcactgtcaggccggatacactggcagctactgcgag
gagcaggtggatgaatgcattcccaatccttgccagaacggagcaacctgtactgactac
ctgggcggctactcctgcgaatgcgtgccaggttatcatggagtgaactgctctgatgag
atcaatgagtgtctgtctcagccctgccagaacggaggcacatgcatcgacctgatcaat
acctacaaatgctcctgtcctcggggaacacaaggtgtgcactgcgagatcaacattgac
gactgcacacccttcaccgaccccgtcacccaggagcccaaatgctttaaccagggccgc
tgtgtggaccgtgtgggtgggtaccactgcatttgcctggccggatatgtgggggaacgc
tgtgagggcgatgtcaatgaatgcttatcgaacccttgtgacccccgtggcacacacagc
tgcatccagctcacgaacaactaccgctgcgagtgtcgcacgggatacacaggtcagcgc
tgtgacaaagtgtttgatggctgtaaggggaagccttgtcgtaatggaggcacctgcgct
gtggctagtaacactcctcatggcttcatctgcaaatgtccaccgggttttacaggctca
acgtgcgagtatgacgctcatgcctgtggtactctccattgtaaaaatgggggtacatgc
gtttctggtcaaaagagccccaaatgcctgtgcacccctgccttcactggtcctgagtgc
cagtatcccactgagggtcactgcaccaccaatccatgctacaacggaggcacgtgtgag
tacatctccgaggccccatactaccactgcatctgtcccaccgacttcaatggcctcttc
tgccacatcctggacttcagcttcccaggtggccctgctcgagatatcacacccgctccc
aaagtgaccgtgagctgcgagatagcagagtgtgagaacaagaaaagcaacaagatctgt
gacggcgcatgtaataattacgcctgcgactgggatggaggggactgctcgctgaacttc
aatgacccgtggcagaactgttcgggcgcgctgcagtgctggcgctattttaataacggg
aagtgtgatgaacagtgtcacaacgctggatgcctctatgacggatttgactgccagaga
ctggagggccagtgcaatccactctatgaccagtattgcaaagaccactatgcagatggc
cactgtgaccagggctgcaataacgcagagtgtgaatgggacgggctggactgtgccagc
aacatacccgagaagttagctgcaggactcctagttgtggtggtccacattttacccgac
cagctccgaaacaactcctttggatttctgcgggagctcagccgagtcctccacaccaat
gtggttttccgacacgacagcaagggagaggaaatgatctacccttattacggcaacgag
caggagctaagaaagcacaacatcaaacgatcactagatggctgggacgatgcttccagc
aacgtcttgagctccgtaaaaagtagcatttacaacatagtggtggaaggagggcgaaaa
cgcagagaactggacgagatgcagatcaaaggctctgtggtgtatctggagattgacaac
cgccaatgctaccaacaaacctctgagtgcttccagaacgcaaacgacgtggcggcgttc
cttggagccctggcttccagcggcaatctgaatatgccttacgtcatcgaggccgtcaca
agtaagattgacgggccgtcgcctatagagctctacccagtctacgtggttctggcagga
ttggcactgctggcctttgtcgccgtgggaatggtcgcgtcccgtaaacgccgccgggaa
cacggtcagctatggtttccagagggtttcaagaccagcgagcctagcaagaagaagagg
agggaaccggtcggtgaagactccgtcggtctgaggccacttaagaactgttcagacatt
tcattaatggatgacaaccagaatgaatggggagaagaggaaacatcagacaccaaacgc
ttcaggtcggaggagcaggcgatgcttgatttagatcatcagccagatcaccggcagtgg
acgcagcagcacttggacgcagccgatctacgaatcccatccatcgctcccacaccccct
cagggcgagatagagaacgattgcatggatgtcaatgcccgaggaccagatggctttact
cctctcatgatcgcatcttgtagtggaggagggctagaaacaggaaacagcgaggaagag
gaggatgcttcagccaacgtcatcaatgacttcatttatcaaggtgccaaccttcacaat
cagacagaccgcacgggtgagacggccctacacctggctgcccgttatgcccgctcagat
gctgcaaaaaggctcctggaggccagtgcagacgccaacatccaggacaatatgggacgg
actccattacacgctgccgtggctgcagatgcacaaggggtcttccagattttgattcgt
aaccgtgccacggacctcgatgcccgcatgcatgatggcactacacctctgatactggca
gcaagacttgcggtcgagggaatggtggaggaactcatcaactgccatgctgatgttaat
gccattgatgattctggtaaatcagcacttcactgggcagctgctgtcaacaatgtagat
gcagcgatggtattgcttaagaacggggcaaataaagatatgcaaaacaataaggaggag
actcccttattcctggctgcaagagaaggaagttacgaaaccgctaaagttcttcttgag
catttcgccaatcgagagatcacggaccacatggatcggctcccgagggatattgctcag
gacagaatgcatcacgacatcgtgcggctcatcgacgaatataacctggttcgcagccct
cccatgcacagcgcccctctctgcaccacactctccccgcctctctgctcccccaacgcc
ttcatgggtagcatgaagccctccgtgcaaagtaaaaaaccccgcaagccgagcataaaa
ggcatcggttgcaaggatggcaaagatatgaaagtcaagaagaagaaggcacaggatgga
aagggacacttactagacagctcagctgtgctctcgccggtcgattccttggagtcgccc
cacgggtacatatctgacgtcgcctctccccccctgatgacgtccccctttcagcagtcg
ccctccatgtcgctaaatcacttacagggcatcgcagacacacacatgggcgtcaaccat
ctgggaatgggcaacaagcaagacctggcccatatacagtttgatccgttacccccacgt
ctcacccatcttccagtggccggatctaacggctcaaacatcatgaatggccagtgcgaa
tggctcgggcggatgcacaatagcatgggtccgcaaaatcaattcggagccatgaggaac
gcctcaggccaggccagccttcaccagcaaggcctgatgacgtctctgcacaatagccgc
cccgccacactctctcagatgatgaactatcaaagcctgcagaacacacacctcagcacg
cagccgcatttaatgcagcagattcagcagaacatgcaacagagaccgcagcagacgaac
gtccagctgcagcaccagagctccaatccagccggcggcgtgagccagaacttactcggc
ggggagttgggtggtccggagctccagcagagtgcggggaacagcatgcccatccatacc
atcatcccccaggagacccagctgttgaacccgacttctctgggtcccagcatggcggga
acacagttcctgacaccaccttcccagcacagttacacagccccaatggacgccaacacc
cccagccaccaactccaagtgcctgatcacccatttctcacgccgtctccaggttcaccg
gaccagtggtccagctcgtcgcctcactcaaacatgtctgactggtcggagggcatttcc
agtcctcccactagcatgcagtcacaaatcggacacataccggagcagttcaaataa
DBGET
integrated database retrieval system
