Puntigrus tetrazona (Sumatra barb): 122352108
Help
Entry
122352108 CDS
T08985
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
122352108 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122352108 (hdac4)
Enzymes [BR:
ptet01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122352108 (hdac4)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
122352108 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
122352108
NCBI-ProteinID:
XP_043105571
LinkDB
All DBs
Position
9:complement(23005838..23244247)
Genome browser
AA seq
1052 aa
AA seq
DB search
MSSHSRPDGLPSKEQPLELLKPSGVNHIPPVDVSAALPLQVPPSAIPMDLRVDHQFALAP
SDPAQREQQLQQELLALKQKQQIQRQLLIAEFQRQHEQLSRQHEAQLQEHVKHQQDLLAL
KHQQELLEHQRKLERHRQEQELEKQQREQKLQLLKNKERGQESAVASTEVKMRLQEFVLN
KKKALAQRSLNHCLPNDPRYWYGKTQHSSLDQSSPPQTGISTYNHPVLGMYDPKDDFPLR
KTASEPNLKLRSRLKQKVTERRSSPLLRRKDGPITTAKKRSLDMAESACSSAPGSGPSSP
NNSSNNITNENGIAGSISSSPVEPSLAHRLTGREGPVSQLSLYTSPSLPNITLGLPATGP
SSVASGQQDGDRMAVPGLQPGIPITTPFMPGAHLPSYLAASNLEREGGSAHNTLLQHMVL
LEQSAAQNSLVAGLGGVSLQSHPIHKLRQHRPLGRTQSAPLPQNAQALQQLVVQQQHQQF
LEKHKQQFQQQQLHISKMMAKPNEPGRQHESHPEETEEELREHQGLGDSTEALPHGVTIK
QEPPDEQDEEFQQRERQAEEELLFRQQALLLEQQRIHQLRNYQASMEAAGLSVTFPGHRP
LSRAQSSPASATFPIVVQEPPAKPRFTTGLVYDTLMQKHQCMCGNSNIHPEHAGRIQSIW
SRLQETGLRGQCECIRGRKATLEELQTVHTEAHVLLYGTNPLRQKLDSSVTPMFVRLPCG
GIGVDSDTIWNEVHSSSAARLAVGSVVDLVFKVASGELRNGFAVVRPPGHHAEESTPMGF
CYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPNVLYVSLHRYDDGNFFP
GSGAPDEVGIGPGMGFNVNMAFTGGLEPPMGDADYLAAFRTVVMPIANEFAPDVVLVSSG
FDAVEGHAPPLGGYKLTAKCFGYLTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSAL
LGNELDPLPEDVLQQRPNSNAIHSMEKVLEVHSKYWRSLQRSASTLGYSLLEAQRCETEE
AETVTAMASLSVANKHIGKRTEEEPMEEEPPL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccacagccgcccagatggacttcccagtaaagaacagccactggaacttctg
aagccatctggagtcaatcacattcctcctgttgatgtgagtgcggcgctgccactgcaa
gtgccgccttctgccatccccatggacctgcgtgtggaccaccagttcgccctggcgccg
tcggacccggcccagcgcgagcagcagctgcagcaggagcttctggccctcaagcagaaa
cagcagatacagaggcagctcctgatcgcagagtttcagcggcagcacgagcagctctcg
cgccagcatgaagcacagctgcaggagcatgtcaagcatcagcaggacctcctggccctg
aaacatcagcaggagctcctagaacaccagcggaagttggagcgccatcgtcaggaacag
gagctggagaaacagcagcgggaacagaagctccagttgctcaaaaacaaagaacgtggc
caagaaagcgctgtggcgagcactgaggtgaagatgaggttgcaggagtttgtcctcaac
aaaaagaaagcgctggcccagaggagcctcaaccactgcctgcccaacgacccacgctac
tggtacgggaaaacccagcacagctccttggaccagagctcgccacctcagacagggatt
tccacttacaaccacccggtgctgggaatgtacgaccccaaagacgacttcccgctccgc
aagacggcatctgagcccaacctgaagcttcgatccagactgaagcagaaagttacggag
cgcagaagtagcccgctgcttcggaggaaggacgggccgatcaccactgcgaagaagcgc
tctctggacatggcagaatcggcatgcagcagcgctcctggttctggtccgagttcacct
aacaacagttcaaacaacattaccaatgagaacggcatcgctggatcgatctctagcagt
ccagtggagccatctttggcgcacagactcacgggcagagagggtcctgttagccagctg
tctctgtacacatcgccctcccttcccaacatcaccctgggcctgccagccaccggcccc
tccagcgtggcgtctggccaacaggatggtgacagaatggcagtgccaggcttgcagcca
ggaatacccataaccactccgttcatgccaggagcccacctgccttcgtacctggctgcg
tccaacttagagcgggagggcggctcggcacacaacaccctcctgcagcatatggtgctt
ctggagcagtcggccgcacagaactccctggtcgcaggcctggggggcgtgtccctgcag
tcgcatcccatccacaagctccggcagcatcggcccctcgggcgcacgcagtcggccccc
ctaccccagaatgcccaggctctgcaacagctggtggttcaacagcaacaccagcagttc
ctggaaaaacacaagcaacagttccagcagcagcagctccacatcagcaagatgatggct
aagccgaacgagccgggccgtcagcacgagagccacccggaggagacggaggaggagctg
agggagcaccagggcctgggcgactccacggaggctcttcctcacggggtcaccatcaaa
caggaacctcccgatgagcaggatgaagagttccagcaaagagagaggcaagccgaggaa
gagctgctcttcagacagcaagctctcctcttggagcaacagaggatccatcagctgagg
aactatcaggcatctatggaagcggccggtctgtctgtgaccttcccaggccatcggccc
ctgtccagagcacaatcatccccggcctctgcaacctttcctattgtggtgcaggaacct
ccagccaaaccgcgctttaccaccggtctggtgtacgacaccctgatgcagaaacaccag
tgcatgtgtggaaacagtaacatccaccccgaacacgccgggcgcatccagagcatctgg
tcacgactgcaggagacggggctgcgcggacagtgtgagtgcattcgaggcaggaaagcc
actctggaggagcttcagacggtccacactgaagcccatgtgctgctttacggaaccaac
cctctcagacagaaactggacagctcagtgacacccatgttcgtgagactgccgtgcgga
ggaatcggggttgacagtgacactatctggaatgaagtgcactcgtccagtgctgctcgt
ctggccgtgggatctgtagtggatctggtgtttaaagtggcttcaggagagctgaggaac
ggctttgctgtggtacgacctccaggacatcacgccgaggaaagcactcccatgggattt
tgctatttcaactcggtcgccattgcagccaaactcctgcagcagagactcaacgtcagt
aagattctcattgtagactgggatgttcaccatggaaatgggactcagcaggccttctac
agtgaccctaacgtgctgtacgtgtctctccatcgctacgatgacgggaactttttccct
ggcagtggagcccctgatgaggtgggcatcggtccaggcatgggctttaacgtgaacatg
gccttcaccggaggtctggagccacccatgggagacgcagactatctggcagcattcagg
acggtggtgatgccaatcgcgaacgagttcgctccagacgtggtgctggtttcttcgggc
ttcgacgctgtggaggggcatgcaccgcctctgggaggatacaagctcacggccaaatgt
tttggctacctgaccaagcagctgatgggactggccggcggccggctggtgctcgcactg
gaggggggtcacgacctcaccgccatttgcgatgcctccgaagcatgtgtttctgctttg
cttggaaacgagttggaccctcttcctgaagacgtgctacaacagaggccgaactccaac
gccatccactccatggagaaagttctggaagtccacagtaaatactggcgctcgctgcag
agatctgcctcgactctgggctactcactgctggaggctcagagatgtgaaactgaagag
gcagagacggtgaccgccatggcctccctgtctgtggccaacaagcacattggaaagagg
acagaggaggagcctatggaagaggagcctccattgtag
DBGET
integrated database retrieval system
