KEGG   Puntigrus tetrazona (Sumatra barb): 122355177
Entry
122355177         CDS       T08985                                 
Symbol
opn4b
Name
(RefSeq) opsin 4b isoform X1
  KO
K04255  r-opsin
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:ptet04030]
    122355177 (opn4b)
G protein-coupled receptors [BR:ptet04030]
 Rhodopsin family
  Vision
   Opsin
    122355177 (opn4b)
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srsx 7TM_GPCR_Srx 7TM_GPCR_Srv 7tm_4
Other DBs
NCBI-GeneID: 122355177
NCBI-ProteinID: XP_043109159
LinkDB
Position
12:complement(11394257..11420206)
AA seq 558 aa
MNASRSLSMGIPTRAPDGTAVSPDTLAPWNYSAVSAHKLMELPARATTVAMVQDVRHPFP
TVDVPDHAHYTIGSVILAVGITGMVGNFLVMYAFCKSRSLRTPANMFIINLAVTDFLMCV
TQTPIFFTTSLHKRWIFGEKGCELYAFCGALFGICSMITLMVIAVDRYFVITRPLASIGV
MSRKRALLILSAAWAYSMGWSLPPFFGWSAYVPEGLLTSCSWDYMTFSPSVRAYTMLLFT
FVFFIPLFVIMYCYFFIFRAIRDTNRAVGKINGEGGPRDSIKKMHRMKNEWKMAKIALIV
ILLYVISWSPYSCVALTAFAGYADMLTPYMNSVPAVIAKASAIHNPIIYAITHPKYRSAI
AKYIPCLGVLLCVPRRDRFSSSSFMSTRRSTLTSQSSENSSNLHRAGKTRLSSLSDSESG
WTDTEADLSSASSRPASRQVSSDIRKDLSDFKHTSSVRLKVKSRDSGIFDRTSGQSLADP
NLNRTCTYISTVGDKDEISMAEANIVSENVDEKRPLARIPSIIVTSESSHAILSEGHSGS
PSRQLPGASVTAEAAGID
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgaacgcctcgcgctcgctcagcatgggaatccccactcgagcccccgacggcaccgcg
gtgagcccggacactctcgccccgtggaattacagcgcagtgagcgcgcacaagctgatg
gagctgccggcgcgggccactacggtggcaatggtgcaggatgttcgacatcctttccca
acagtggatgttcctgaccacgctcactacactatcggttctgtcattctagcagtgggc
atcactggcatggtgggaaacttcttagtcatgtatgccttctgcaagagtaggagtctg
agaacaccagccaacatgttcatcattaatttagctgtcacagactttctgatgtgtgtc
actcagacgccaatcttcttcaccaccagtttgcacaagcgatggatatttggagaaaaa
ggttgtgagttatatgcattctgcggcgctctgtttggtatctgctcaatgatcacactc
atggtcattgcagtagatcgatactttgtaatcactcgtcctttggcctctatcggcgtt
atgtcacgcaagcgagccctgttgatactctctgctgcttgggcgtactctatgggctgg
agcctgcctccgttctttggatggagtgcgtatgtccctgaaggtctgctgacatcttgt
tcgtgggattacatgactttcagtccttcagtacgagcctacacaatgctgctctttact
tttgttttcttcatccctctctttgtcatcatgtattgctacttcttcatcttcagggcc
atccgagataccaacagagctgtcggaaaaatcaatggagaaggaggacccagagactct
ataaagaagatgcatcgaatgaaaaatgaatggaagatggcaaagatagcactcatagtg
atccttttgtatgtcatctcctggtctccttactcttgtgtggctcttaccgcttttgct
ggctacgctgacatgctcaccccctacatgaactctgtgcctgctgtgattgccaaagca
tccgccattcacaacccaatcatctacgccatcactcaccccaagtacaggtctgccatt
gcgaagtatataccatgtttgggagtcctgctgtgtgtgcctcgtagagaccggttcagc
agcagtagctttatgtccacacgacgctctactttaacaagccagtcctcagagaacagc
agcaacctgcaccgcgccgggaagacgcgcttgtcctctttgtctgacagcgagtcgggt
tggacggacacagaggcagatctctccagtgcgagttcacgccctgctagtcgtcaggtc
tcatctgacatccgtaaagatttgtcagacttcaagcacacgagctctgtgaggctgaag
gtcaaaagcagagactcgggtatctttgacagaacctcgggtcagagtctagctgatcca
aacttgaaccggacctgtacatacatcagcacggtgggtgacaaagatgagatctccatg
gctgaggcaaatatagtctcagagaatgttgatgagaaaaggccgttggctcggatccct
tccatcattgtgacgtcagagtccagtcatgccatcctctcagaaggtcacagcggcagc
ccatccagacagctccctggtgcttcagtcactgcggaagctgctgggattgactga

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