Puntigrus tetrazona (Sumatra barb): 122355177
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Entry
122355177 CDS
T08985
Symbol
opn4b
Name
(RefSeq) opsin 4b isoform X1
KO
K04255
r-opsin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ptet04030
]
122355177 (opn4b)
G protein-coupled receptors [BR:
ptet04030
]
Rhodopsin family
Vision
Opsin
122355177 (opn4b)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
7TM_GPCR_Srv
7tm_4
Motif
Other DBs
NCBI-GeneID:
122355177
NCBI-ProteinID:
XP_043109159
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Position
12:complement(11394257..11420206)
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AA seq
558 aa
AA seq
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MNASRSLSMGIPTRAPDGTAVSPDTLAPWNYSAVSAHKLMELPARATTVAMVQDVRHPFP
TVDVPDHAHYTIGSVILAVGITGMVGNFLVMYAFCKSRSLRTPANMFIINLAVTDFLMCV
TQTPIFFTTSLHKRWIFGEKGCELYAFCGALFGICSMITLMVIAVDRYFVITRPLASIGV
MSRKRALLILSAAWAYSMGWSLPPFFGWSAYVPEGLLTSCSWDYMTFSPSVRAYTMLLFT
FVFFIPLFVIMYCYFFIFRAIRDTNRAVGKINGEGGPRDSIKKMHRMKNEWKMAKIALIV
ILLYVISWSPYSCVALTAFAGYADMLTPYMNSVPAVIAKASAIHNPIIYAITHPKYRSAI
AKYIPCLGVLLCVPRRDRFSSSSFMSTRRSTLTSQSSENSSNLHRAGKTRLSSLSDSESG
WTDTEADLSSASSRPASRQVSSDIRKDLSDFKHTSSVRLKVKSRDSGIFDRTSGQSLADP
NLNRTCTYISTVGDKDEISMAEANIVSENVDEKRPLARIPSIIVTSESSHAILSEGHSGS
PSRQLPGASVTAEAAGID
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcctcgcgctcgctcagcatgggaatccccactcgagcccccgacggcaccgcg
gtgagcccggacactctcgccccgtggaattacagcgcagtgagcgcgcacaagctgatg
gagctgccggcgcgggccactacggtggcaatggtgcaggatgttcgacatcctttccca
acagtggatgttcctgaccacgctcactacactatcggttctgtcattctagcagtgggc
atcactggcatggtgggaaacttcttagtcatgtatgccttctgcaagagtaggagtctg
agaacaccagccaacatgttcatcattaatttagctgtcacagactttctgatgtgtgtc
actcagacgccaatcttcttcaccaccagtttgcacaagcgatggatatttggagaaaaa
ggttgtgagttatatgcattctgcggcgctctgtttggtatctgctcaatgatcacactc
atggtcattgcagtagatcgatactttgtaatcactcgtcctttggcctctatcggcgtt
atgtcacgcaagcgagccctgttgatactctctgctgcttgggcgtactctatgggctgg
agcctgcctccgttctttggatggagtgcgtatgtccctgaaggtctgctgacatcttgt
tcgtgggattacatgactttcagtccttcagtacgagcctacacaatgctgctctttact
tttgttttcttcatccctctctttgtcatcatgtattgctacttcttcatcttcagggcc
atccgagataccaacagagctgtcggaaaaatcaatggagaaggaggacccagagactct
ataaagaagatgcatcgaatgaaaaatgaatggaagatggcaaagatagcactcatagtg
atccttttgtatgtcatctcctggtctccttactcttgtgtggctcttaccgcttttgct
ggctacgctgacatgctcaccccctacatgaactctgtgcctgctgtgattgccaaagca
tccgccattcacaacccaatcatctacgccatcactcaccccaagtacaggtctgccatt
gcgaagtatataccatgtttgggagtcctgctgtgtgtgcctcgtagagaccggttcagc
agcagtagctttatgtccacacgacgctctactttaacaagccagtcctcagagaacagc
agcaacctgcaccgcgccgggaagacgcgcttgtcctctttgtctgacagcgagtcgggt
tggacggacacagaggcagatctctccagtgcgagttcacgccctgctagtcgtcaggtc
tcatctgacatccgtaaagatttgtcagacttcaagcacacgagctctgtgaggctgaag
gtcaaaagcagagactcgggtatctttgacagaacctcgggtcagagtctagctgatcca
aacttgaaccggacctgtacatacatcagcacggtgggtgacaaagatgagatctccatg
gctgaggcaaatatagtctcagagaatgttgatgagaaaaggccgttggctcggatccct
tccatcattgtgacgtcagagtccagtcatgccatcctctcagaaggtcacagcggcagc
ccatccagacagctccctggtgcttcagtcactgcggaagctgctgggattgactga
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