Puntigrus tetrazona (Sumatra barb): 122358271
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Entry
122358271 CDS
T08985
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122358271 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122358271 (gabra4)
Ion channels [BR:
ptet04040
]
Ligand-gated channels
GABA-A
122358271 (gabra4)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Zip
CytochromB561_N
PAP1
SOG2
Motif
Other DBs
NCBI-GeneID:
122358271
NCBI-ProteinID:
XP_043114006
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Position
14:complement(9597698..9628014)
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AA seq
558 aa
AA seq
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MVSAKKEMVTAMYPTSISTLLYFLCVAACIKRISGQIRKDEKLYPENFTRILDRLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLRYDGPVEILRLN
NLMVTKVWTPDTFFRNGKRSVAHNMTAPNRLFRIMKNGTILYTMRLTIIAECPMRLVDFP
MDGHSCPLKFGSYAYPKTEMIYTWTKGPQHSVEVPAESSSLVQYDLIGQTVSSETVKSIT
GEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNVQAERAKRKQAKAAA
AAAAAKGSVPSGKNKDTEEVLQQNSDTNGNLRKRVNSNVQSQPDSKKTQRTETSSKSGTA
ASKPTLTSQSSSTSEGTSSFSSQSRLSPSSASQSNAATSSSASKTTPPAPPSTPTVPEKP
SPSAPTGSAPLHHLLGPKLENIKKKEAKAAPQPTPPPTGGASKIDEYARILFPVSFGAFN
MVYWVVYLSKDTMEAKGG
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggagatggtgactgcgatgtaccccacttctatttccactctc
ctctactttctgtgcgtggcggcttgcataaagcgaatatctggacagatcagaaaggat
gagaaattatacccggaaaatttcacacgcattctggaccgacttctggatggatacgac
aacagactccgacctggatttgggggtccagtgacggaagtgaagaccgatatttacgtc
acaagttttggcccagtttccgacgtagagatggagtacaccatggatgtgttcttccgc
cagacgtgggtggataggcggttgaggtacgacggcccggtggagatcctccggctaaat
aacctgatggtgaccaaagtctggacccctgacacgttcttcaggaacggcaaaagatct
gtggctcacaacatgacggcgcccaacagacttttccgaatcatgaagaacggcaccatc
ctgtacactatgaggttgacaataattgcagaatgtccgatgagactcgtcgatttcccc
atggatggccattcctgccctctgaagttcggcagctatgcctacccaaagaccgagatg
atctacacctggaccaaaggcccgcagcattctgtggaggttccagcagagtcgtccagc
ctggtgcagtacgacctgatcggacagactgtgtcgagcgagaccgtaaagtccatcaca
ggtgaatacgtggtaatgacggtctacttccacttgaaacgcaaaatgggctacttcatg
attcagacgtacatcccctgcatcatgactgtaatcctttctcaagtgtctttctggata
aataaggaatccgtgcccgccagaactgtctttggaatcaccactgttctgaccatgacg
accctcagcatcagcgcccgtcactctttgcccaaggtctcgtacgccaccgccatggat
tggttcatcgccgtgtgcttcgctttcgtcttctctgctctcatcgagtttgcggctgtg
aactacttcaccaacgttcaggcagagagagccaaaagaaaacaggccaaagccgctgcc
gccgccgcggctgccaagggctccgtgccgtcaggaaaaaataaagacacagaggaggtt
ctacagcaaaactcagacaccaatggaaacttacgaaaacgcgtcaactccaatgtccag
tctcagccagactccaagaaaacccaaagaaccgaaacgtctagcaagagtggcacagct
gcatccaaaccgaccttgaccagccaatcatcttccacctcagagggtaccagcagtttc
tccagccaatcacgtctcagccccagttccgccagccaatcaaatgcagccacttcatcc
tctgcctcaaagacaactccgccagccccgccctcaactccaacagttcccgagaaaccg
tcgcccagcgcacccacaggctccgcccctcttcatcatctcctcgggcctaaattagag
aatattaaaaagaaggaagccaaggctgcccctcaacctacccctcctccaaccggagga
gccagcaagatcgacgaatacgcacgtattttattcccagtgtccttcggggcgttcaac
atggtgtactgggtggtttacttatctaaagacaccatggaggcaaagggaggctaa
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