Puntigrus tetrazona (Sumatra barb): 122358957
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Entry
122358957 CDS
T08985
Symbol
srsf1a
Name
(RefSeq) serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03040
Spliceosome
ptet05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122358957 (srsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122358957 (srsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptet03041
]
122358957 (srsf1a)
Spliceosome [BR:
ptet03041
]
Common components
Common spliceosomal components
SR proteins
122358957 (srsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
122358957
NCBI-ProteinID:
XP_043114897
LinkDB
All DBs
Position
15:complement(9798018..9801553)
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AA seq
252 aa
AA seq
DB search
MSGGVIRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEF
EDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGGFGGGGGGGGGGGGGGGAPRGRYGPPS
RRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLD
NTKFRSHEGETAYIRVRVDGPRSPSYGRSRSRSRSRSRSRSRSNNRSRSYSPRRSRGSPQ
YSPRHSRSRSRS
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtggtgtgatccgcggccctgctggaaacaacgactgccgcatctatgtcggg
aatctgccgcctgatatccgcacgaaagatgtcgaagatgtgttttataagtacggagcc
attcgagacatcgatctgaaaaaccgacgaggcggacctccattcgcctttgtcgagttt
gaagacccaagagatgcagaagatgccgtctatgcccgcgatgggtatgattatgatggc
tatcgtcttcgggtggagtttcccaggagcgggagaggaggttttggcggtggtggcggc
ggcggaggaggtggtggtggaggcggcggggctcctaggggcagatatggacccccctcc
agacgttcagagtacagagtgatcgtatcggggcttccaccgagtggcagctggcaggat
ctgaaggatcacatgcgcgaagcaggtgatgtatgttatgctgacgttttccgagatgga
actggggtggtggagtttgttcgcaaagaagacatgacctacgctgttcgcaaactggat
aacacaaaattccggtcgcatgagggagaaaccgcgtacatccgtgtgagggtggacggc
ccccgcagtccgagctatggacgatcaagatcaaggagccgcagtcgcagcaggagtcgc
agccgcagcaacaaccgtagccgaagctactccccgcgccgcagccgaggatccccgcag
tactccccgcgtcatagccgctcccgctctcgctcctaa
DBGET
integrated database retrieval system
