Puntigrus tetrazona (Sumatra barb): 122362825
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Entry
122362825 CDS
T08985
Symbol
fbn1
Name
(RefSeq) fibrillin-1 isoform X1
KO
K06825
fibrillin 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04350
TGF-beta signaling pathway
ptet04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122362825 (fbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122362825 (fbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ptet00536
]
122362825 (fbn1)
Glycosaminoglycan binding proteins [BR:
ptet00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122362825 (fbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
hEGF
FXa_inhibition
EGF
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
FBN_EGF_st1
EGF_2
Motif
Other DBs
NCBI-GeneID:
122362825
NCBI-ProteinID:
XP_043120367
LinkDB
All DBs
Position
18:16618170..16678066
Genome browser
AA seq
2883 aa
AA seq
DB search
MRRLLVLAAGISALASLCVSAQTLDAGADRAAQTQAADRAAEQPRSSRSKRRGGGQDVLK
GPNVCGSRHHAYCCPGWKTLTGGNQCIVPICRSSCGDGFCSRPNMCTCPSGQISPTCGSK
SVQNCNIRCMNGGTCSEDQCLCQKGYSGAHCGQPVCESGCLNGGRCVAPNRCLCNYGFTG
AQCERDYRTGPCFASVSNQMCQGQLTGIVCTKTLCCATVGRAWGHPCEQCPAQPHPCRRG
FIPNHRSGACQDVDECQAIPGLCQGGNCVNTVGSFECKCPAGHKFNEITQKCEDIDECSQ
IPGLCSGGQCSNTIGSYFCRCPVGFDTALDGSRCIDARTGFCYANIVSGRCANLLPQRMS
KSQCCCENRGCWSGSSVPEMCPIRGTEEYQRLCLYSHTVPDPDRPDLIPLPGPGPGPGPG
PGPIPRPGPGPGFPDDPRDPYPHDPIPVPPISVDLPSFTIRPVILPQNVSIRNMCEAFRN
LCINGRCVPTPGSYRCECNMGYRLDGRGECIDANECERNPCVNGECVNTPGSYYCQCPAG
FQTTATRTECRDLDECVANGRICNNGRCVNTEGSFHCVCNAGFEISADGRNCQDTDECLI
RNICLNGMCINEDGSFKCICKPGYLLDGTGRFCVDVDECEIPGMCMNGHCVNTEGSFRCE
CMPGLAVGLDGRVCVDTHMRSTCYGGYKRGQCVRPFFGAVTKSECCCASVEYAYGEPCQP
CPPLNSAEFSALCSHGQGTTTDGRDINECALDPDICQNGVCENMLRTYKCNCNLGFEVDI
SGKTCVDVDECMMNRHLCENGLCRNTPGSFTCHCPKGFTFQPETEVCEDVDECLSNPCVN
GECKNSAGSFACLCSTGSTLDTSGTLCVETTKGTCWLKVVNAQCEININGATLKSHCCAT
LGAAWGSPCAKCEPDPFCSKGYGRVKGTVCEDVNECEVFPGICINGKCVNTDGSFVCQCP
SGMTVDSSGRTCVDLRTELCYLTHVDERCGAPISGRHRADACCCSVGAAWGPECDECPEK
GTPEYTQLCPRPGFSHRGDFINGKPFLKDINECKMIHSLCKNGRCRNTIGSFRCRCDSGF
ALDFDERNCTDIDECHISPDLCGHGTCVNTAGDFRCDCFTGYESGFMMMKNCMDIDECER
NPLLCRGGECINTEGSFRCECPEGHEIAPDGSACLDINECELSDKLCRNGQCVNMIGRYQ
CSCNTGYKSTEDRLSCVDIDECTIENGGCETFCTNSEGSYECSCRRGYALMPDLRSCTDI
DECEDSLDICHGGQCTNIPGEFQCLCFDGFMSSEDMKSCLDVNECELNPNICLSGKCENT
KGSFICHCDLGFSVRKGTTGCTDINECEIGAHNCDRHASCTNTAGSFRCSCAPGWIGNGI
KCTDLDECSNGTHLCSPSADCMNTMGSYRCLCKEGFAGDGFYCVDTDECAENVNLCENGH
CLNVAGGYRCECDMGFIPTADGKACEDIDECTFADICVNGRCRNIPGLFRCLCDPGYELD
RSGGNCTDVNECANPTTCISGLCLNTPGSYICSCPPDFELNPTGVGCVDTRSGNCYLDIR
YRGDFSENLDCSTEIGVGVSKASCCCSLGQAWGSPCEACPLLNSSEYRTLCPGGEGFRPN
PITVILEDINECQELPGLCQGGNCINTFGSFHCECPRGFALNEETRICEDVNECERSGIC
GPGLCYNTIGNYTCICPAEYMQINGGNNCMDMRKSLCYRNYYSDNATCDGELTFNVTKKF
CCCSYNIGRAWNKPCERCPVPSTNEFAVLCGSERQGFSIDIYTGQIIDIDECREIPGVCE
NGVCINMIGSFRCECPMGFVYNDKLLICEDIDECQNGPVCQQNAVCLNVPGSFRCECTPG
YRQTPTQQCVDRNECAENPNICSPGQCIDMVGSYRCICPNGFKSTPDLCIDVDECERQPC
GNGTCKNTVGSYNCLCYPGFQLSHNNDCIDTDECSSLRGLCRNGNCINTVGSFVCVCLDG
YKLSPDGRVCVDINECLISPGTCGPGTCQNLDGSYRCICPPGYFLQNDRCEDIDECSQTG
EICIFGKCVNTPGSFRCECPEGFQLSSTGKRCMDFRVNYCYTEFENGRCQAPKSLNTTKS
SCCCSVMPGQGWGDPCEICPSPEEEAYKALCPASGKILTIDGTAVDVDECSENPGMCKNG
HCINTDGTFRCECPFGYRLDYKGINCEDTNECELGNPCGNGTCTNVEGAFECSCDEGFEP
GPMMTCEDINECSQNPLLCAFRCVNTVGSYKCKCPAGYVLREDQRMCKDQNECEESLDDC
EVRGMSCKNLIGTYMCICPPGYTRQPNGDSCVDLNECKAKPGICENGHCENTVGSYRCVC
DQGFSPSPSRTECIDNRQGFCFLEVLQTMCQMSSSSRVSVRKSECCCDGGRGWGPNCELC
PLPGTTHYKKMCPLGPGYTTDGEDIDECKVMGNLCKNGQCLNTPGSFSCVCKVGYTTDLS
GTQCVDVDECVQAPKPCNFICKNTDGGYLCSCPRGYVLQEDAKSCRDLDECSTKQHNCQF
LCVNTIGGFTCKCPPGFTQHHTACIDNNECASEPGLCGPNGVCQNSPGSFNCECQRGFSL
DPNGQHCEDMDECVGNHRCQHGCQNLVGGYRCSCPQGYLQHYQWNQCVDENECQNGQICG
GASCHNTLGSFRCLCPTGFSFEQQTGGCQDINECSSSQNPCSFGCSNTDGGYLCGCPPGY
LRAGQGHCLSGAGLSSGGSPLIPSADGDENALSPEACYECKINGYPKKGRKRRNANESEE
LQNALDGVSLASVDVDNTLQLRLNISTLKSKDHIIDFMPALSTLANHMRYAIDHGDGDGL
FRMSQKDGASYLHVSKKKALQPGAYYLQIRSVPQSGSPERPDTDYLSGQRGDALHMSVQI
VLH
NT seq
8652 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggctgctcgtgctcgcggcgggaatctcagcgctcgcgtcgctgtgcgtatca
gcgcagacgctcgacgcaggcgcagacagagccgcgcagacgcaggcggcggacagagcc
gcggagcagcccagatcgagccgatcgaagcggcgcggcggcggacaggacgtgctgaag
gggccgaacgtgtgtggatctcgtcatcatgcgtactgctgtcccgggtggaagaccttg
accggaggcaaccagtgcatcgtccctatttgtcgcagctcctgcggagacggcttttgc
tccagacctaacatgtgcacctgtccgagcggccagatctctcccacctgcggatccaaa
tcagtccagaactgtaacatccgctgcatgaacggcggcacgtgttcagaggaccagtgt
ctgtgtcagaagggctactccggagctcactgcggccagccggtgtgtgagtccggctgt
ctgaatggaggccgatgtgtcgctccgaaccgctgcctgtgtaactacggcttcaccgga
gctcagtgtgagagagattacaggacgggcccgtgttttgcgtcggtcagtaaccagatg
tgtcagggtcagctgaccggaatcgtctgcactaagactctgtgctgtgcgacggtgggc
cgggcctggggtcatccctgtgagcagtgtccagcacaaccacacccctgccgccgagga
ttcattcccaaccaccgctctggagcctgccaggatgtggacgagtgccaggccattcct
ggactctgtcaggggggaaactgtgtgaatactgtgggctcatttgagtgcaaatgccct
gctggacacaagttcaacgaaatcacacagaaatgcgaagacatcgacgagtgctctcag
atcccgggcctgtgcagtggaggtcagtgctccaacaccatcggcagctacttctgcagg
tgtccggtgggcttcgacacggcgctggacggctcgcgctgcatcgacgctcggacgggc
ttctgctacgctaacatcgtgagcggacgctgtgctaacctgctcccacaacgcatgtcc
aagagtcagtgctgctgtgagaacagaggatgctggtccggatccagcgtcccggagatg
tgtcccatccgaggaacagaggagtatcagaggctctgtctctatagtcacacggttcct
gatccggaccgacccgatctgattccgcttccgggtcctggtcctggtcctggtcctggt
cctggtcctattcctcgtcccggtcccggtcccggttttcccgatgacccacgagatcct
taccctcatgatccgatacctgtgccgcccatctctgttgaccttccctccttcaccatc
agacctgtgatcctgcctcagaacgtcagcatcaggaacatgtgcgaggcgtttcgtaac
ctgtgtattaacggccgctgcgtgccgacgccgggcagctaccgctgcgagtgtaacatg
ggctacagactggacggccgcggggagtgcatcgatgcgaacgagtgtgagagaaacccc
tgtgtgaacggagagtgtgtgaacacgcctggatcctattactgccagtgtcctgctgga
ttccagaccacagccaccagaaccgagtgtcgagatctggatgagtgtgtggctaatggt
cgtatctgtaataatggccgctgcgtcaacacggagggcagcttccactgtgtgtgtaac
gcaggcttcgagatctccgctgacggacgcaactgccaagacactgatgagtgtttgata
aggaacatctgtctgaacggcatgtgcatcaacgaggacggaagcttcaaatgcatctgc
aaacctggatatttattagatggtactggacgattctgtgtggatgtggacgagtgtgag
atccctgggatgtgtatgaacggtcactgcgtcaacaccgagggatcgttccgctgcgag
tgtatgccaggactcgctgtggggctcgacggacgcgtctgtgtagacacacacatgcgc
agcacgtgttacggaggatataagcgtggtcagtgtgtgcgaccgttcttcggcgccgtc
accaaatctgagtgctgctgcgccagtgtagagtatgcctacggagagccctgccagccg
tgcccgccgctcaactcagcggagttctcagctctctgcagtcacgggcaaggaaccacg
acggacggcagagatataaacgagtgtgcactggatcctgatatctgtcagaacggtgtg
tgtgagaacatgctgcgaacgtacaagtgtaactgtaacctgggcttcgaggtggacatc
agcgggaagacctgcgtggatgtggacgagtgcatgatgaacagacacctgtgtgagaac
ggcctgtgcagaaacacaccgggcagcttcacctgccactgtcccaagggcttcaccttc
cagcccgagacagaggtgtgtgaagacgtggacgagtgtttgagtaacccgtgtgtgaac
ggcgagtgtaagaacagcgccggctcgttcgcgtgtctctgctccacaggaagtacactg
gacacctcaggaactctgtgtgtggagaccactaagggcacgtgttggctgaaggtggtg
aacgcacagtgtgagatcaacattaatggagcgacgctgaagtctcactgctgcgccacg
ctgggggcggcctggggctcaccgtgtgccaaatgtgaaccagatccgttctgctctaaa
ggttacggtcgagtgaagggcaccgtctgtgaggacgtgaacgagtgtgaggtgtttcct
ggtatctgcatcaatgggaagtgtgtgaacaccgacggctcgttcgtctgtcagtgcccc
agcggcatgacggtggactccagcggaaggacctgcgtcgacctgcggacggagctgtgt
tacctcacacacgtggacgagcgctgcggggccccgatctcgggccggcaccgagcggac
gcctgctgctgctccgtgggcgcggcctggggccccgagtgtgacgagtgtccagagaaa
ggaacgcccgaatacacccagctctgccctcggcccggattctcccaccgaggagacttc
atcaacggcaagcccttcctgaaagatataaacgagtgtaagatgatccacagcttgtgc
aagaacggccgctgcaggaacaccatcgggagcttccggtgccgctgcgacagcggcttc
gctctggacttcgatgaaaggaactgcacagatatcgacgagtgccacatctctcctgat
ctgtgcggtcacggcacctgtgtgaacaccgccggtgatttccgctgtgattgtttcacc
ggatacgagagcggcttcatgatgatgaagaactgcatggacatcgacgagtgtgagcga
aaccctttactctgcagaggaggagaatgcatcaacaccgaaggcagcttccgctgcgag
tgtccagagggtcacgagatcgcccctgacggctccgcctgcctcgatatcaatgagtgt
gagctgagcgacaagctgtgcaggaacggtcagtgtgtgaatatgatcggccgctaccag
tgctcctgtaacaccggctacaagtccactgaagacaggctctcgtgtgtcgatatcgat
gaatgcaccatagagaacggaggctgtgagacgttctgcaccaattcagaaggaagttac
gagtgcagctgtcgccgtggttacgccctcatgcccgacctccggagctgcacagatatc
gatgagtgtgaggacagtctggacatctgtcacggcggtcagtgcaccaacatccccgga
gaattccagtgcctgtgtttcgacggcttcatgtcttctgaggatatgaaatcatgtctg
gatgtgaacgagtgtgagctgaatccgaacatctgtctgagcgggaagtgtgagaacacc
aagggctcgttcatctgtcactgtgacctcggcttctccgtcaggaaagggacgaccggc
tgtacagacattaacgagtgtgagatcggcgctcataactgcgaccgtcacgccagctgt
acgaacaccgccggcagcttcagatgcagctgcgctccgggatggatcgggaacgggatc
aaatgcacagatctggatgagtgttctaacgggacgcacctgtgcagccccagcgcagac
tgcatgaacaccatgggctcctaccgctgcctgtgcaaggagggcttcgctggagacgga
ttctactgcgtcgacactgatgagtgtgcagaaaacgtgaatctgtgtgagaacggacac
tgtctgaacgttgctggtggataccgctgtgagtgtgacatgggcttcatccccaccgca
gacggaaaagcctgtgaagacatagacgagtgcacgtttgcagatatctgtgtgaacggc
cgctgtcgtaacatcccgggtctgttccggtgcctgtgtgacccggggtacgagctggac
cgcagcggaggaaactgcacagacgtgaacgagtgtgctaaccccaccacctgcatcagc
ggtctgtgtctgaacacaccgggcagttatatctgcagctgtccgccggacttcgagctc
aaccccactggagtcggctgcgtcgacactcgctctggaaactgctacctggatatacga
tatcgcggtgatttctctgagaatctggactgctcgactgagatcggtgtgggcgtttcc
aaagcgtcctgctgctgctctctgggtcaggcgtggggttccccctgcgaggcctgtcca
ctgctcaactcctcggagtacaggactctgtgtcctggaggagaaggatttcgacccaat
cccatcactgtgatactagaggatatcaacgagtgtcaggagctgcctggtctgtgtcag
ggaggaaactgcatcaacacgtttggtagttttcactgtgaatgtccgagaggttttgcg
ctcaatgaagaaaccaggatctgtgaagatgtgaatgagtgtgagcgttctggcatctgt
ggtccgggtctgtgctacaacaccatcgggaactacacctgcatctgtcccgccgagtac
atgcagatcaacggaggaaacaactgcatggacatgaggaagagcttgtgctacaggaac
tactactctgataacgccacatgtgacggagagctgaccttcaacgtgaccaagaagttc
tgctgctgctcatataacatcggccgggcctggaacaaaccctgcgagcgctgccccgtc
cccagcaccaatgagttcgctgtgctgtgtggaagtgagaggcagggattttccattgac
atttacaccggtcaaatcatcgacatcgacgagtgccgtgagattcccggtgtgtgtgag
aatggcgtgtgtatcaacatgatcggcagtttccgctgtgaatgtccgatgggtttcgtc
tataatgacaagctgctgatctgtgaagatattgacgagtgtcagaacgggccggtgtgt
cagcagaacgccgtctgtctgaacgttcccggaagtttccgctgcgagtgtacacctgga
taccggcagactcccacccagcagtgtgtcgatcgtaacgagtgcgctgagaatcccaac
atctgcagtcctggtcagtgtattgatatggtgggtagttaccgctgcatctgccccaac
ggcttcaaatccacaccagacctgtgtatcgatgtggacgagtgcgagcgccagccgtgt
ggaaatggaacctgcaagaacactgtgggctcctacaactgtctgtgttacccagggttc
cagctgtcacacaacaacgactgcatcgacacagacgagtgctcttcgctccggggtttg
tgtcggaacggaaactgcatcaacacggtgggctcgtttgtgtgtgtgtgtctggacggg
tataaactctctcctgatggccgggtgtgtgtggacatcaacgagtgtttgatcagccct
ggcacctgcggcccgggaacgtgccagaacctggacgggtcctacaggtgcatctgtcct
ccgggttacttcctgcagaacgaccggtgtgaagatatcgacgaatgctctcagactgga
gagatctgcatctttggcaagtgtgtgaacacgccgggcagcttcaggtgcgagtgtccg
gagggattccagctgtcctccaccgggaagagatgcatggattttcgtgtgaattactgc
tacactgagttcgagaacggacgctgtcaggctccgaagagcttgaacaccactaaaagc
tcctgctgctgcagcgtgatgccgggtcagggatggggtgacccctgtgagatctgcccc
tctccagaggaggaggcatacaaagccctgtgtcctgcctctggtaaaatcctgactata
gacggcacggctgtggatgtggacgagtgttcagaaaacccgggcatgtgtaagaacggt
cactgcatcaacacagacgggacgttccgctgcgagtgccccttcggctaccggctggac
tacaaagggatcaactgcgaagacaccaacgagtgtgagctggggaacccgtgtgggaac
ggcacctgcacaaacgtggagggagcgttcgagtgcagctgtgacgagggcttcgaaccc
gggcccatgatgacctgtgaagacatcaacgagtgttcccagaatcctctgctgtgtgcg
ttccgctgcgtcaacacggtgggctcgtacaagtgtaaatgtccggcgggatacgtgctg
agagaagaccagcggatgtgcaaagatcagaacgagtgtgaggagagtctggacgactgc
gaggtcagaggaatgtcctgtaagaacctgatcggcacgtacatgtgcatctgtccgccg
ggatacaccagacagcccaacggagacagctgcgtggatctgaacgaatgcaaggccaag
ccgggcatctgtgagaacggccactgcgagaacacggtgggcagttaccgctgcgtctgc
gatcagggcttcagtcccagtcccagcagaaccgagtgcatcgataaccgtcagggcttc
tgcttcctggaggttctgcagacgatgtgtcagatgagctccagcagtcgtgtgagtgtg
aggaagtctgagtgctgctgtgacgggggccgcggctgggggcccaactgtgagctctgc
ccgctgcctgggaccacacactacaagaagatgtgcccgctgggccccggatacaccacc
gacggcgaggatatagacgagtgtaaggtgatggggaatctgtgtaagaacggtcagtgt
ttgaacacacccggctccttcagctgcgtctgtaaagtgggatacaccactgacctcagc
ggcacgcagtgtgtggatgtggacgagtgtgttcaggctcctaagccctgtaacttcatc
tgtaagaacacggatggtggatatctgtgctcctgtcctcgaggatacgtgctgcaggaa
gatgccaagagctgccgggatctggacgaatgcagcaccaaacaacacaactgtcagttc
ctgtgtgtcaacaccatcggaggattcacctgcaaatgcccaccaggattcacacaacac
cacacggcctgcatcgataataatgagtgtgcctctgaaccgggtctctgtggtccgaac
ggagtgtgtcagaacagccctggcagttttaactgtgagtgtcagagaggtttctccctc
gaccccaacggacagcactgtgaagacatggacgagtgtgtggggaatcatcgctgtcag
cacggctgtcagaatctggtgggaggctacaggtgcagctgtcctcagggatacctgcag
cactaccagtggaaccagtgcgtcgatgagaacgagtgccagaacggtcagatatgcggc
ggcgcctcgtgtcacaacacgctgggcagtttccgctgtctctgtccgacgggcttttcc
ttcgagcagcagaccggaggatgtcaggacatcaacgagtgcagctcctcacagaacccc
tgcagcttcggctgctccaacaccgacggaggatacctgtgtggctgcccgcctggatac
ctgcgtgctggacaggggcactgtctgtccggggcggggctgtcgtccggtggatctcct
ctgattccctctgctgacggagacgagaacgctctctcccccgaggcctgctacgagtgt
aagatcaacggctatccgaagaagggccgcaaacgcaggaacgccaacgagagcgaagag
ctgcagaacgctctggacggggtcagtctggccagtgtagacgtggataacaccctgcag
ctgcgtctgaacatcagcacgctgaagagcaaagaccacatcatcgacttcatgccggcg
ctgtccacgctcgctaaccacatgcgctacgctatcgaccacggcgacggcgacggcctg
ttccgcatgagccagaaggacggcgccagctacctgcacgtctccaagaagaaagctctc
cagccgggagcctattatttacaaatccgcagcgtgcctcagagcggcagcccggagcgg
cccgacacagactacctcagcgggcagcgaggagacgccctgcacatgagcgtccagatc
gtcctgcactga
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integrated database retrieval system