Pseudonaja textilis (eastern brown snake): 113439343
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Entry
113439343 CDS
T09005
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113439343 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptex03021
]
113439343 (TAF5L)
03036 Chromosome and associated proteins [BR:
ptex03036
]
113439343 (TAF5L)
Transcription machinery [BR:
ptex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113439343 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
113439343 (TAF5L)
Chromosome and associated proteins [BR:
ptex03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
113439343 (TAF5L)
STAGA complex
113439343 (TAF5L)
TFTC complex
113439343 (TAF5L)
SAGA complex
113439343 (TAF5L)
SLIK complex
113439343 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
ANAPC4_WD40
NBCH_WD40
RMC1_N
Nup160
PROPPIN
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
113439343
NCBI-ProteinID:
XP_026560959
Ensembl:
ENSPTXG00000012397
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MKRVRTEQIQMAVSCYVKRRQYVDSEGPLKQGLRLCHTAEEMAANLTVQSESGCTNVISA
APCLAEPQQYEVQFGRLRNFLTDSDSQHSQEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTLTIQDILSNFKLRALLDNKYVIRLQEDSYNFLLRYLQ
SDNNSALCKVLSLHIHLDVQSAKRVDYQLYASGGSSRSESNGLEPTDMPASILQNEAALD
LLQDSIKRVKDGPPSLTTICFYAFYNNEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRPK
KLKSEPHLVDISRIHLACDILDEEAEDDDDDIGTEMKLLRGHSGPVYSTSFLSDSSGLLS
CSEDTTIRYWDLGCFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPL
RIYAGHLADVDCIKFHPNSNYLATGSTDKTVRLWSTQQGNTVRLFTGHRGPVLSLAFSPN
GKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI
RNTYCNAPVDGSSSELVGVYTGQISNVLSVQFMACNLLLVTGIAQENQEH
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgtacgcaccgaacagattcagatggctgtttcctgctatgtcaagcgcagg
cagtacgtagactcagaaggtcccctgaaacaagggctgcgcctatgccacacagctgaa
gaaatggctgctaatctgacagtacaatctgaatcgggttgtacaaatgtgatttctgct
gcaccctgcttagcagagccccaacaatatgaagtacagtttgggcggttgcgcaacttt
ctgacagattcagattcccagcatagccaggaagtgatgcctctcctgtatcctctcttt
gtctacctccatctcaacatggtccaaaatggcctaaagagcacagtggacagtttctac
agtcgcttccatgggatgttcttacagaatgccagtcagaaagacataattgaacagtta
caaactacattaacaattcaagacatcctgtccaatttcaaacttcgggcacttctggac
aataaatatgtgatccgccttcaggaagacagctacaacttcctcctccgctacctccag
agtgataataacagtgctctctgcaaagtcctgtccttgcatattcacctagatgtgcaa
tccgctaagagagtggactatcagctctatgctagtggtggctcttcacgcagtgagagc
aatggcctggaacctactgacatgcctgcttccatcttgcagaatgaagcagccttggac
ctcctgcaagatagcattaaaagagtcaaagatgggcccccatcccttactaccatatgt
ttctatgcattctataataatgagcagttgctgaatacagcagagatctcgccaaatagc
aagctgctggctgctggttttgacaattcctgtgtgaagctatggagcttgcggcccaag
aagctgaaatctgagcctcacttagtagatatttcccgaatccacttggcctgtgatatc
ttggatgaagaggctgaagatgatgatgatgatataggaactgaaatgaagttattaaga
gggcactctggaccagtgtatagcacaagttttttgtcagacagttcaggattgctgtca
tgctctgaagatacaactatcagatactgggaccttggatgttttacaaacactgtcttg
taccaaggacatgcttatccagtgtgggacttggacatcagcccttgcagcttgtacttt
gctagtgcttctcatgaccgtacagcaagactctggtcatttgatcggacgtatccccta
cggatatatgcgggccatttagcagatgtcgactgcatcaagtttcatccaaattctaac
tacttggcaacaggatctacagacaaaacagtgcggctctggagcacccagcaaggaaac
acagtgcgtctgtttacaggtcaccggggtccggttctatcccttgccttttctcccaat
ggtaagtacttggcctcagcaggtgaagaccagcgcttaaaattgtgggacttggcatct
ggaacgctttacaaagaactgcgggggcacacagataatatcaccagccttacttttagt
ccagatagtagtttgattgcttctgcttcaatggacaactctgttcgagtttgggatatt
cgaaacacttactgcaatgctcctgtagatggctcttctagcgagctagttggagtatat
actggacagatcagcaatgtactgagtgtacagtttatggcctgtaaccttcttttagtg
actggaattgcacaagagaatcaggaacattag
DBGET
integrated database retrieval system
