Pseudonaja textilis (eastern brown snake): 113443408
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Entry
113443408 CDS
T09005
Symbol
CACNA1F
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1F
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex04010
MAPK signaling pathway
ptex04020
Calcium signaling pathway
ptex04260
Cardiac muscle contraction
ptex04261
Adrenergic signaling in cardiomyocytes
ptex04270
Vascular smooth muscle contraction
ptex04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113443408 (CACNA1F)
04020 Calcium signaling pathway
113443408 (CACNA1F)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
113443408 (CACNA1F)
09153 Circulatory system
04260 Cardiac muscle contraction
113443408 (CACNA1F)
04261 Adrenergic signaling in cardiomyocytes
113443408 (CACNA1F)
04270 Vascular smooth muscle contraction
113443408 (CACNA1F)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptex04040
]
113443408 (CACNA1F)
Ion channels [BR:
ptex04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
113443408 (CACNA1F)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
GPHH
Ca_chan_IQ
PKD_channel
HemY_N
Motif
Other DBs
NCBI-GeneID:
113443408
NCBI-ProteinID:
XP_026567396
LinkDB
All DBs
Position
Unknown
AA seq
1991 aa
AA seq
DB search
MSNSECNGGQAPPRSAAEAFVEASGQAIAWTLTSGGSDTLGSTGSLAQKKRQQQNKHKTQ
GSNVVHRSPRALFCLRLNNPIRRAAISIVEWKPFDILILMTIFANCVALGVYIPFPEDDS
NVSNHNLEQVEYIFLIIFTVETFLKILAYGLVMHPSAYIRNGWNLLDFVIVVVGLFSVIL
EQVSHKPGEAHHMSGKPGGFDVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKAMVPLLHI
ALLVLFVIIIYAIIGLELFIGRMHKTCFIIDSDLEAEEDPSPCAFSGHGRECTVNNSECR
GKWDGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWMQDAVGHELPWVYFVSLVIFGS
FFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQMEEDLKGYLDWLMQAGDIEPDEEK
DERSEKHTYITVADLMEKKKKKKWFKHSSHSTDSHTSLPASESTSVNTENVEDEERLQSH
CYDVCLXLSKTKFGRHVQRINRLFRKKCRLAVKSVSFYWMVLLLVFLNTLTIASEHYRQP
YWLTQIQAYANKVLLSLFTLEMLLKMYSLGLQAYFVSFFNRFDCFVVCGGILETVLVEFE
IMQALGISVLRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLG
MQLFGGKFNFDETQTKRSTFDTFPQALLTVFQILTGEDWNAVMYDGIMAYGGPYFPGMLV
CIYFIILFICGNYILLNVFLAIAVDNLADGDDINSSKEEKGREENTEDGVEGGEEEVEEE
EAVGEGNEGAGEEEVADQQSLAESHLDKLEDTPTEKVVPIPEGSAFFCLSQTNPLRVGCH
KLIHHHIFTNLILVFIILSSISLAAEDPIRAHSFRNNILGYFDYAFTSIFTVEILLKMTS
YGAFLHKGSFCRNWFNLLDLLVVSVSLISFGIHSSAISVVKILRVLRVLRPLRAINRAKG
LKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYSCTDEAKHTPIECKGTFI
VYKDGDVAHPMVRERMWLNSDFNFDNVLSGMMALFTVSTFEGWPALLYKAIDAYAENQGP
IYNYRVEISIFFIVYIIIIAFFMMNIFVGFVIITFRAQGEQEYKNCELDKNQRQCVEYAL
KAQPLRRYIPKNKYQYKFWYMVNSTCFEYIMFVLILLNTIALAVQHYEQSEPFNNVMDLL
NMVFTGLFTVEMFLKIIAFKPKHYFVDAWNTFDALIVVGSIVDIAVTEINSAGLQESSED
SSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVALLIAMIFFIYAVIGM
QTFGKIAMQDGTAINRNNNFQTFPQAVLLLFRCATGEAWQEIMLASLPGKRCDPESDFEP
GEEFTCGSNFAIVYFISFFMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIW
SEYDPAAKGYIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVTFNAT
LFALVRTSLKIKTEGDLDMANRELRSVIKKIWKRTKPKLLDEVLPVAEGEEITVGKFYAT
FLIQDYFRKFRKRKEKGLFGPDGSPSNSSALQAGLSCLQVLGPEIRRAMSCDLEGKEEVE
EEEEEVEEKIIEEETAIYKSSELYSAAPDRRTSVAETPTEQEGKTMASQHLSKTSSSHAL
NGLKPYEENLSGSDEPADLPVVSIQRRINRQRSSFPPTAEEVVNQTELCIEDTSAEQGSN
SREEDSENLPPHDKQSQRHNPQSHQHHWQSGYGGSVPLLSHRVNSRLIKGVLDGRQTKRR
RLLPATPADRKPAFSIQCLQRQDSCDDIPIPGTYHQKAPLGPTSSSQSWATPPKRGRLLY
APLILVEEERVPGYSWEKNSSSLPPMSQAHCLKVPSPLRHSSGGRSGSADSLVEAVLISE
GLGEYAQDPNFVAFTKREIADACHMTLDEMESAATDLLSRKSAGLVYSDEESFRSHEEED
LADEMICITTY
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atgtctaattcggagtgcaacggaggacaggcaccaccccgatcagcagccgaggctttt
gtggaagcatcaggccaggccatagcatggacgcttacgagtggaggttcagatactttg
ggctcaactggcagccttgctcagaagaagcgtcagcagcagaacaagcataagacccag
ggctccaatgtggtgcaccgttcaccacgagccctcttctgtctacgtttgaacaatccc
atccgcagagctgctatcagcattgtagagtggaaaccttttgacatcctcatccttatg
acaatctttgctaattgtgtggccttaggagtctatattccctttccagaagatgattcc
aatgtctccaaccacaacttggagcaagtggaatatatttttctcatcatcttcacagtg
gaaactttcctcaagatccttgcctatggtctggtcatgcatcctagcgcctatattcgc
aatggctggaatcttcttgattttgtcattgttgtagtgggtctcttcagtgtcattctg
gaacaagtctcccacaagcctggggaggcccatcacatgagtgggaagccaggcggcttt
gatgtcaaagccctgcgagcttttcgtgtcctgcgacctctgcgtctggtctctggcgtc
cctagtctgcatattgtcttgaattctatcatgaaagccatggtgccccttctgcacata
gcactacttgttctttttgtcatcatcatctatgccatcattggcttggagctcttcatt
ggtcgcatgcataagacctgcttcatcattgattcagatctggaggctgaggaagacccg
tcaccttgtgcgttttctggacacggtcgggaatgcacagtgaacaatagcgaatgtcgt
ggcaagtgggatggacccaatggtggaatcaccaattttgacaacttcttttttgccatg
cttactgtcttccaatgcattaccatggaaggttggactgatgttctctactggatgcaa
gatgcagtgggtcatgaactgccgtgggtttattttgtcagccttgtcatctttggctct
ttctttgtgcttaatttggttttgggtgtgttaagtggggaattctctaaggaacgagag
aaggcaaaagcccggggagacttccaaaagctacgagagaaacaacagatggaagaagat
ctgaagggctacctggattggctcatgcaagcaggagacattgaacccgatgaagaaaaa
gatgagagaagtgaaaagcatacttacattactgtggccgacctgatggaaaagaagaag
aagaagaaatggttcaagcatagcagtcattccaccgacagccacaccagtcttcctgcc
agcgaaagtacctcagtcaacacggagaacgttgaagatgaagagcgccttcagagccac
tgctatgatgtgtgtttgtgactttccaagaccaaatttggccgccatgtacagcgcatc
aaccgactttttcggaagaaatgtcgtttggctgtcaaatctgtctctttctactggatg
gttctactccttgtgtttctgaataccctcaccattgcttctgaacattacaggcagcct
tattggctcacccaaatccaagcttatgctaacaaagtattgttgtcactgttcaccctg
gagatgctgctgaagatgtacagcctaggccttcaagcctattttgtcagcttcttcaat
cgttttgactgttttgtggtatgtggtgggattttggagactgtcctggtagaattcgag
atcatgcaagcccttggaatctccgtgctccgttgtgtccgcctcctgcgaatcttcaaa
gtaaccaggcattgggcctccctgagcaaccttgtggcttctttgctgaattccatgaag
tccattgcctccttacttctactgctgttcctcttcattatcatcttctccttgctaggc
atgcaactctttggtggcaaatttaactttgatgagactcagaccaaacgcagcaccttt
gacactttcccccaagccttgctcactgtcttccagatactgacaggggaagattggaat
gcagtgatgtatgatgggatcatggcctacggtggcccctattttcccggcatgctggtc
tgcatctatttcatcattctctttatttgcggcaactatatcttactcaatgtcttcttg
gctattgcagtggacaatcttgctgatggagacgatattaattcctccaaagaagagaaa
ggaagagaagaaaacactgaagatggagtagaaggtggtgaggaagaggtggaagaggag
gaggctgtgggagaaggtaatgaaggagcaggagaggaagaggtggcagatcagcagagt
ttggcagagtcccacctagacaaactggaagacactcctacggagaaagttgtaccaatt
cctgagggaagtgcctttttttgccttagtcaaacaaacccccttcgtgttgggtgccac
aagctgatccaccatcacatcttcaccaatctcatccttgtcttcatcattcttagcagc
atctctttggcagctgaagatcccatccgagcacactccttccgcaacaatattttgggc
tactttgactatgccttcacatctatcttcactgttgagatcttgctcaagatgacttca
tatggtgccttcctgcacaagggctcattctgccggaactggtttaatctcctggatctg
ctggttgtcagtgtctcactcatctcttttggcatccactccagtgccatctctgtggtg
aagatcttgcgggtactgagggtactccgtcctctccgagccatcaaccgagccaaaggg
ctgaagcacgtggtacaatgtgtgttcgtagcaatccgcaccattggaaatatcatgatt
gtcaccaccttgctgcagttcatgtttgcttgcattggtgttcaattattcaagggcaaa
ttctatagctgcacagatgaggccaagcataccccaattgagtgcaaaggcacattcatt
gtgtacaaggatggagatgtggctcacccaatggtgcgtgagcgcatgtggctcaacagt
gacttcaactttgacaatgtgctgtcaggcatgatggctctcttcactgtctccactttt
gaaggatggccagcgctcttgtacaaagctattgatgcctatgcagaaaaccaaggacca
atatacaattaccgggtggagatctccatcttcttcattgtctacatcatcattattgcc
ttcttcatgatgaatatttttgtgggctttgtcatcatcactttccgggcccaaggagag
caggaatacaaaaactgtgagctggacaagaaccagcggcaatgtgtggaatatgccttg
aaggctcaacccttacgacgctatattccaaagaacaaatatcagtacaaattctggtat
atggtcaattccacttgttttgaatacatcatgtttgtgctgatcttgctgaacactatt
gctttggctgtacagcactatgaacaatcagagccttttaataacgtgatggatctgctc
aatatggtgttcacaggcctcttcactgttgaaatgtttctgaagattattgccttcaag
cccaagcactactttgttgacgcatggaatacctttgatgctttgatcgtggttgggagt
atagtagacattgctgttactgaaatcaacagtgcaggcttgcaggagagctcagaggac
agttcccgcatctctatcaccttcttccgcctcttccgtgtcatgcgcctggtcaagctc
ctcagcaaaggtgagggtatccgtaccctcctctggactttcatcaaatctttccaggct
ttgccgtatgtggccctccttattgccatgattttctttatctacgctgtcattggcatg
cagacctttggcaaaatagctatgcaagatggtacagccatcaatcgcaacaataatttc
cagacctttccacaagctgtgttgctgcttttcaggtgtgccacaggggaagcctggcag
gagatcatgctagccagcttgcctggcaagcgctgtgaccctgagtctgattttgaacct
ggggaggaattcacttgtggtagcaactttgctattgtctatttcatcagcttcttcatg
ctgtgtgccttcctgatcattaacctctttgttgctgtcatcatggacaattttgactat
ctcactcgggactggtccattctgggtccccaccacctggatgagttcaagaggatctgg
tcggaatatgatccagctgccaaaggttacatcaagcatctggatgtggtgactctattg
cgccggatacagccacctctgggttttgggaagctctgtccccaccgagtggcctgcaaa
aggctggtggccatgaacatgccattgaactcagatggaactgtcactttcaatgccacc
ctctttgctctggtgcgtacatcactaaagatcaagacagaaggagacctggatatggcc
aatagggaactccgttctgtcatcaaaaagatctggaaacggaccaagcccaaattactg
gatgaggtgttacctgttgcagaaggggaagagataactgtaggaaaattctatgccaca
tttctgatccaagattatttccgtaaattccgtaagcggaaagaaaagggactgtttgga
ccagatgggtccccaagcaactcctccgccttgcaggctggactgagctgcttacaagtt
ctagggcctgagatccgcagagcaatgtcctgtgacctggaaggaaaagaggaggtggag
gaagaagaagaagaagttgaggagaaaatcattgaggaagagacagccatttacaagagt
tctgagttgtatagtgcagcccctgaccgccgtacctcagttgctgagactccaacagaa
caagaaggcaagactatggcctctcagcacctctctaagaccagctcctcccatgcatta
aatgggctgaagccctatgaagagaaccttagtggcagcgatgagcctgctgacttgcct
gttgtttccattcaacgcaggataaacaggcaacgctccagtttcccaccaacagcagaa
gaagtagttaaccaaactgaactttgtatagaggacacctcagctgagcagggaagcaat
agccgggaggaagactctgaaaacctgcccccccatgacaagcagtctcagcggcacaac
cctcagtcccaccagcatcactggcagagtggctacgggggctctgtgcctctgctctcc
catcgggtcaacagcagactcatcaaaggagtactggatggcaggcaaaccaagcgccgg
cgcctcttgccagctactcccgcagaccgcaaaccagcctttagcatccagtgcctgcag
cgtcaagacagctgtgatgacatccccatcccaggcacctaccaccaaaaggcaccactg
ggcccaacatcttcctcgcaatcatgggccacacctccaaaacggggccggctgctctat
gctccgctcatcctagtggaggaggagagggtgccaggatacagctgggaaaaaaatagc
agcagccttccacccatgtcgcaggctcactgcctcaaggttccaagcccactccggcac
agctccggtggcagatctggcagcgcagacagtctggtggaggcggtgctcatctccgaa
ggcctaggcgagtacgcccaggacccaaattttgtggcctttaccaagcgggagattgct
gatgcatgccacatgactctggatgaaatggaaagtgctgccacggacttgttgagtcgc
aagtctgctggccttgtttatagtgatgaagaaagcttccgttcccatgaggaagaggac
ttggctgatgagatgatctgcatcaccacttattga
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integrated database retrieval system
