Panthera tigris altaica (Amur tiger): 102950287 Help Entry 102950287         CDS       T02988                                  Symbol HDAC6 Name (RefSeq) histone deacetylase 6   KO K11407   histone deacetylase 6 [EC:3.5.1.98] Organism ptg  Panthera tigris altaica (Amur tiger) Pathway ptg04613   Neutrophil extracellular trap formation ptg05014   Amyotrophic lateral sclerosis ptg05034   Alcoholism ptg05203   Viral carcinogenesis Brite KEGG Orthology (KO) [BR:ptg00001]  09150 Organismal Systems   09151 Immune system    04613 Neutrophil extracellular trap formation     102950287 (HDAC6)  09160 Human Diseases   09161 Cancer: overview    05203 Viral carcinogenesis     102950287 (HDAC6)   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     102950287 (HDAC6)   09165 Substance dependence    05034 Alcoholism     102950287 (HDAC6)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:ptg01009]     102950287 (HDAC6)   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ptg03019]     102950287 (HDAC6)    04131 Membrane trafficking [BR:ptg04131]     102950287 (HDAC6)    03036 Chromosome and associated proteins [BR:ptg03036]     102950287 (HDAC6) Enzymes [BR:ptg01000]  3. Hydrolases   3.5  Acting on carbon-nitrogen bonds, other than peptide bonds    3.5.1  In linear amides     3.5.1.98  histone deacetylase      102950287 (HDAC6) Protein phosphatases and associated proteins [BR:ptg01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      102950287 (HDAC6) Messenger RNA biogenesis [BR:ptg03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      102950287 (HDAC6) Membrane trafficking [BR:ptg04131]  Autophagy   Aggrephagy    Other aggrephagy associated proteins     102950287 (HDAC6) Chromosome and associated proteins [BR:ptg03036]  Eukaryotic type   Histone modification proteins    HDACs (histone deacetylases)     Class II HDACs      102950287 (HDAC6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Hist_deacetyl zf-UBP zf-UBP_var Motif Other DBs NCBI-GeneID:  102950287 NCBI-ProteinID:  XP_015394293 LinkDB All DBs Position Un AA seq 1073 aa AA seqDB search MTSTGQDSTSTRQRRSRHNPHSPPHDSSVTSKRGVKKGAILSSSPSLAEVKKKGRMKKLS QAAEQDLIMDLRRLDLNLEAKTLSGTGLVFDEQLNEFHCLWDDSFPESPERLHAIKEQLI QEGLLDRCVSFQARFAEKDELMLVHSLEYIDLMETTQYMNERELRILADTYDSVYLHPNS YTCACLASGSVLRLVDAVLGKEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ KHDIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGHG QGYTINVPWNQVGMRDADYIAAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMATTP AGFAQLTHLLMGLAEGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPILESPGAPCPSA LVSLCCALEALEPFWEVLVRSVETPEEDILEEDSAEEKDEEGLWRPPALPILTWPMLQAR TGLVYDQRMMGHHNLWDNHHPEMPQRVLRIMQRLEELGLAGRCLMLPARPAMEVLNGTAV VRPPGHHAERDAACGFCFFNSVAVAARHAQAISGQALRILIVDWDVHHGNGTQHIFEEDP SVLYISLHRYDHGTFFPMGEEGASSQIGRAAGTGFTVNVAWNGPRVGDADYLAAWHRLVL PIAYEFNPELVLVSAGFDAAWGDPLGGCQVSPEGYAHLTHLLMGLANGRIILILEGGYNL TSISESMAACTRSLLGDPPPLLTLSRPPLSGALASITETIQVHRRYWRSLRVMKVEDKEE EPSLSKSVTNPGSAKRMTTPERNILDAGTEKAVSASSVEESTLGQPKSETAMVELSQDQS LEAPTQKAMLDQTTSQAATVEATAGQTTSEEAVGGAEMIQTPPALCTDNQTPTASPEQGA TSQISPSELIENLRTLELNCKAQEAPESQIPEEDKLLGEAAGGQDMLIQSFGVHANTDQA IFYAVTPLPWCPHLVAVCPIPESGLDVTQPCQDCGTLQENWVCLSCYQVYCGRYVSAHML QHHEGSGHPLVLSYVDLSTWCYSCEAYVHHQSLLEVKNIAHQKKFGEDMPHSH NT seq 3222 nt NT seq  +upstreamnt  +downstreamnt atgacctccacgggccaggattccacctcaaccaggcagcgaaggagtaggcataacccc cattcgcccccccacgactccagcgtcacctcgaagcgaggtgttaagaagggtgccata ctctcctccagccctagtctagcagaggtaaagaagaaaggcagaatgaagaagctcagc caagcagcagagcaagacctaatcatggacctgcgaaggctggatctgaaccttgaggcc aagacactgtctggcactggtttggtgttcgatgagcagctaaatgaattccactgcctc tgggatgacagcttccctgaaagccctgaacgactccatgccatcaaggaacagctgatc caggagggcctcctggaccgctgtgtgtcctttcaggctcgatttgctgaaaaggatgag ctgatgttggttcacagcctagaatacattgatctgatggagacgacccagtacatgaat gagagagagctccgcatcctagcagacacctatgactcagtttatctgcatccgaactcc tatacctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgctgtcctgggg aaggagatacggaatggcatggccatcatcaggcctcctggacaccacgcccagcacagt cttatggatgggtattgcatgttcaaccacgtggccgtggctgcccgctacgctcaacag aagcatgacattcagagggtccttatcgtggattgggatgttcaccacggtcaaggaacc cagttcacctttgaccaggaccccagcgtcctctatttctccatccaccgttatgagcag ggtcggttctggccccaccttaaggcctctaactggtccaccataggttttggtcatggc cagggatataccatcaatgtgccttggaaccaggtggggatgcgagatgccgactatatt gccgctttcctgcacctccttctgccggtcgcccttgagttccagccccagctggtcctg gtggccgctggatttgatgcccttcaaggggaccccaagggcgagatggccaccactcca gcagggttcgctcagctaacccacttgctcatgggtctggcagaaggcaaactgatcctg tctctggagggtggctacaaccttcgttccttggctgagggcgtcagtgcctcactccac acccttctgggagacccttgccccatactggagtcccctggcgccccctgcccaagtgcc ctggtgtcactgtgctgcgctctggaagccctggagcccttctgggaggtccttgtaaga tcagttgagaccccggaggaggacatcctggaggaagatagcgcagaggagaaggatgaa gagggactgtggcggcccccagcgctcccaatcctgacgtggcccatgctacaggctcgc acagggctggtctatgaccagcggatgatgggtcaccacaacttgtgggacaaccaccac ccagagatgcctcagcgagtcttacgaatcatgcagcgtttggaggagctgggccttgcg gggcgctgcctcatgctgcctgcacgtcccgccatggaagttttgaatggtaccgctgtg gtgcgtcccccaggacaccatgctgagcgggatgccgcttgtggtttctgcttttttaat tctgtggctgtggctgctcgccatgcccaggccatcagtgggcaggcgctgcggatcctg atagtggactgggacgtgcatcatggtaatggaactcagcacatatttgaggaggacccc agcgtactgtacatttccctgcaccggtatgaccatggcaccttctttcccatgggggag gagggtgccagcagccagataggccgggccgcaggcactggcttcactgtcaacgtggcc tggaatggaccccgtgtgggtgacgccgactacctggctgcatggcatcgcctggtgctt cctattgcctacgagtttaacccagagctggtgctggtctcagcgggctttgacgccgca tggggggacccactggggggctgccaggtgtcgcctgagggctatgcccacctcacccac ctgctgatgggccttgccaatggccgcattatcctaatcctagagggtggctataacctg acatccatctcggagtccatggctgcctgtacccgctccctccttggggacccaccccca ctgctgaccttgtcgcggcccccactatcaggggccctggcctcaatcaccgagaccatc caagtccatcgcagatactggcgcagcttacgggtcatgaaggtggaagacaaggaggag gaaccctccctttctaagtcagtcaccaaccctgggtcagctaagaggatgaccacacca gaaaggaacattctggatgcaggcacagagaaggctgtctcagcatcatctgtggaagag tccactctaggccaacctaagtcagagactgctatggtggagctcagtcaggaccagtcc ttggaggctcccacacagaaagccatgctggaccagaccacctcacaggcagccacagtg gaggccacagcaggccagaccacctcagaggaggctgttgggggagctgagatgatccaa acccctccagctttatgtactgacaaccagactcccacagcctcacctgagcaaggtgcc acatcccaaatatcccccagtgagctgattgagaatctcaggaccttggaactaaactgc aaggctcaggaggcaccagaatctcagatcccagaagaggataagctactgggagaggca gctggaggtcaggacatgctgattcagagctttggggtccatgctaacactgaccaggcc atcttttatgctgtgacacctctgccctggtgtccccatttggtggcagtatgtcccata cctgaatcaggcctggacgtgacccaaccttgtcaggactgtggaacactccaggagaac tgggtgtgtctgtcttgctatcaggtctactgtggtcgttatgtcagtgcccatatgctg caacaccacgaagggtcaggacacccgctggtcctcagctacgtcgatctgtctacctgg tgttacagctgtgaggcctatgtccaccaccagtctctcctagaagtgaagaacatcgcc caccagaaaaagtttggggaggacatgccccactcacactga

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