Panthera tigris altaica (Amur tiger): 102956506
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Entry
102956506 CDS
T02988
Symbol
SCAF4
Name
(RefSeq) SR-related CTD associated factor 4
KO
K13167
SR-related and CTD-associated factor 4
Organism
ptg
Panthera tigris altaica (Amur tiger)
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptg03021
]
102956506 (SCAF4)
03041 Spliceosome [BR:
ptg03041
]
102956506 (SCAF4)
Transcription machinery [BR:
ptg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102956506 (SCAF4)
Spliceosome [BR:
ptg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
102956506 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
102956506
NCBI-ProteinID:
XP_015397542
LinkDB
All DBs
Position
Un
AA seq
1090 aa
AA seq
DB search
MDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSR
HQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDM
AAGTSNAAPVPENVTNNEGSPPPPVKVSSEPPQATTNSVPSVPQLPSSDAFAAVAQLFQT
TQGQQLQQILQTFQQPPKPQSPAIDNAVMAQVQAITAQLKTAPAQPPEQKAAFPPPEQKT
AFDKKLLDRFDYDDEPEAVEEPAASPPQAPLGFPGDGMQQPAYTQHQNMDQFQPRMMTIQ
QDPVHHQVPLPPNGQMPGFGLLPTPPFPPMAQSVIPPTPPVQQPFQASFQAQNEPLTQKT
HQEMEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRR
RHSPRSRSQERRDREKERERRQKGLPQIKPETASVCSTTLWVGQLDKRTTQQDVASLLEE
FGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYK
QYWDVELGVTYIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKHENEVAQNGGAETS
HTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPTFTPPLGIPPPG
FGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAG
INEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLG
TQGVAPGPVIGLQAPSTGLLGAXXXXXXXXXXXMPPPHLQRFPLMPPRPMPPHMMHRGPP
PGPGGFGMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQQPQPQPQQP
PPPQPQPQQPPPAQQPPPAQQQPQPFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYG
NRNDDRDNSNRERREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEENRG
KEKPEVTDRAGGNKTVEPPSSQVGDVDTVSELDKGESESAVVKSSEELPAEATSSVEPEK
DSGSAAEAPR
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaaacctcccatctctcgagccaagatgattcttatcactaaagctgctatt
aaagctattaagctttataagcatgtagttcaaatagtagaaaagttcatcaaaaagtgt
aaaccagagtacaaggttccaggattatatgtaattgactcaattgtgcgacagtctcgt
catcagtttggaactgataaagatgtttttgggccaagattctctaaaaacataactgcc
acattccaatatttatatctttgtccatctgaagataagagtaaaatagttcgcgtgctg
aacctttggcaaaaaaatggagtattcaaaattgaaattattcagcctcttttggacatg
gcagcagggactagtaatgccgctccagtaccagaaaatgttactaataatgaaggctca
cctccacctccagttaaagtttcttctgaacccccccaagccactacaaactctgtaccg
tctgtaccgcagttgcctagctctgatgcttttgctgctgtggcccaactgtttcagaca
actcaaggtcaacagcttcagcagatccttcagacttttcagcaacctccaaaaccacag
tctcccgccattgacaatgctgtgatggctcaggtccaggctatcacggctcagttaaag
acggctcctgcacagccacctgaacaaaaagctgctttccccccgcctgagcaaaaaact
gcatttgacaagaagcttcttgatagatttgattatgatgatgagccagaagctgtggaa
gaacctgccgcttcccctccccaggcaccccttgggtttcctggagatggcatgcagcag
ccagcatatacacaacatcaaaacatggatcagtttcagcctcgaatgatgacaatacag
caggatccagtgcaccatcaggttccacttcctcctaatggacagatgccaggttttggc
cttcttcctacacctccatttcctcccatggctcagtctgtgattcctccaactccaccc
gtgcagcagcctttccaagcttcttttcaggctcaaaatgaaccacttacacagaagaca
catcaggaaatggaagtagaacaaccttgtatccaagaggttaagcgacacatgtctgat
aacagaaagtcaagatctaggtcagcatccaggtcaccaaaaagaaggcgatctcgatct
ggctctagatcgcgaaggtcccgtcatcgacgttctcgttctcggtccagagatcgacgc
cgacattcgcctagatctcggtcccaagaaaggcgagatcgagaaaaagaaagagaacgc
cgacaaaaaggccttcctcaaatcaaaccagaaactgcaagtgtttgtagcactacactc
tgggtgggacagctggacaaacggactactcagcaagatgttgcaagtctcttagaagag
tttggtccaattgaatcaattaatatgatacctcccagaggttgtgcctatattgttatg
gttcataggcaagatgcttatcgcgccctgcagaaactgagccgcggaaactataaagtg
aaccagaaatccataaagattgcctgggctttaaacaaaggaataaaggcagattataag
cagtattgggatgtagaactgggtgttacttatattccatgggacaaagtcaagcctgaa
gaactggagagtttttgtgaaggaggaatgttggacagtgatacacttaatccagattgg
aaaggaatccccaagaagcatgaaaatgaagttgctcaaaatggaggggcagaaacctca
catacagaaccagtatcacctatacctaaacctttaccagtgcctgtccctcctattcct
gtgcccgcacctataacagtgccacctccacaggtcccaccacatcagccgggtcctcct
gtagttggtgctctccagccacccactttcacgcctcccttgggcattcctcctccgggt
tttggtcctggtgttcctcctccacctcctcctccaccatttttgcgcccaggatttaat
ccgatgcatctgccaccaggttttcttcctcctggacccccacctcctataactccacca
gtatccattcctcctcctcacactccaccaataagcatcccaaactctactatcgctggt
ataaatgaagacactacaaaagacttatctattggaaatcccattccaacagtggtgtct
ggggctagaggaaacgccgagtctggtgacagtgtgaaaatgtatggctctgctgtgcca
cctgctgcacccacgaatctgcccacccctcctgtaacgcagcctgtttcacttcttggt
actcaaggagttgcacctggtcctgtaattgggctccaagcaccatccactggtctcctt
ggtgccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatgcctccacctcatttacag
cgatttcctttgatgccacctcgtcccatgccaccgcacatgatgcatagaggtccaccg
ccaggccccgggggctttggaatgcctccacctcatggaatgaaaggcccctttccaccg
catggcccctttgttaggcctgggggaatgccagggcttgggggcccggggccaggccca
gggggtcccgaagacagagacgggaggcagcaacagccacagccacagccacagcagccg
ccaccgccacaaccacagccacagcagccgccaccagctcagcagccgccaccggctcag
cagcaaccacaaccgtttagaaacgataacaggcagcagttcaattcaggtagagaccaa
gagaggtttggaagaagatcttttggaaatagggtggaaaatgaccgggaacggtatggg
aaccgtaatgatgatagagataatagcaatcgtgaaaggagagagtggggaagaaggagc
cctgaccgggacaggcacagagacttggaagagagaaatagacgctctagtgggcatcga
gacagagagagagattctagagatagagagtctcgtagagagaaggaagaaaaccgagga
aaggagaagcctgaggtgacagacagggcaggtggtaacaaaaccgttgaacctcccagt
agccaagtgggagacgtagacactgtttcagaacttgataagggggagtctgagtctgca
gttgtaaaatcttctgaagagttacctgctgaggctacctcatccgttgaacccgaaaag
gattctggctcagcagcagaggctcctcgttag
DBGET
integrated database retrieval system
