Panthera tigris altaica (Amur tiger): 102965366
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Entry
102965366 CDS
T02988
Symbol
LIG3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102965366 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptg03400
]
102965366 (LIG3)
Enzymes [BR:
ptg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
102965366 (LIG3)
DNA repair and recombination proteins [BR:
ptg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
102965366 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
102965366
NCBI-ProteinID:
XP_007096122
LinkDB
All DBs
Position
Un
AA seq
1007 aa
AA seq
DB search
MPLDESAHFVCMTLTFKILFLPTLRALGRKELCLFREQHRWPDRRQFGHWSETELFHGHG
LLQRRKAVLSSQKGGLRPRATRLVFLPGSHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKC
KEKIVKGVCRIGKVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEE
LEDNEKEQISQHIADLSSKATSTPKKKAVVQAKLTATGQVTSPVKGASFVTNTNPRKFSG
FAAKPNNSGEARSSPTPKASLSSSRCDPKHKDCLLREFRKLCAMVAENPSYNTKTQIIQD
FLRKGAAGDGFHGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQG
DVSETIRVFFEQSKSFPPAAKSLLTIQEVDAFLLRLSKLTKEDEQQQALQDIASRCTAND
LKCIIRLIKHDLKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNEQEVEKEPGRR
RALSVQASLMTPVQPMLAEACKSIEHAMKKCPNGMFSEIKYDGERVQVHKNGDHFSYFSR
SLKPVLPHKVAHFKDYIPQAFPGGHSMILDSEVLLIDTKTGKPLPFGTLGVHKKAAFQDA
KVCLFVFDCIYFNDISLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKASDLADMINR
VIREGLEGLVLKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMM
SIFLMGCYDPGSQKWCTVTKCSGGHDDATLARLQKELDMVKISKDPSKIPSWLKINKIYY
PDFIVPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATDLPKLKEL
YQLSKERADFTVAAGDEGSSTTRGSSGENEVTSRPASRASPKQPSTSAKKAGGRRSSPDS
RGGSKPTAKPPPVRVGEKRKAPDEPPGQAKVLLDIFTGVRLYLPPSTPDFSRLRRYFVAF
DGDLVQEFDMASATHVLGSRDENPEAQQVSPEWIWACIRKRRLVAPC
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgccccttgatgaatctgcgcactttgtctgtatgactttgactttcaagatcctcttc
ctcccaaccctccgtgcactcgggcgaaaagaactctgcctcttcagagaacaacatcgc
tggcctgacagaagacagttcggccattggtcagaaacagagctgtttcatgggcacggc
ctcctccagagaagaaaggccgttctgtcatcccagaaaggcggtctaagaccacgtgcc
acccgccttgttttcttgccagggtcgcatgtgggactctgcagtggcccctgtgagatg
gctgagcaacggttctgtgtggactacgccaagcgtggcacggccggctgcaaaaagtgc
aaggaaaagatcgtgaagggcgtatgccggatcggcaaagtggtgcccaaccccttctca
gagtccgggggcgatatgaaagagtggtatcacattaaatgcatgttcgagaaactggag
cgggcccgggccaccacaaaaaaaattgaggacctcaccgagctggaaggctgggaagag
ctggaagataatgagaaggaacagataagccagcacattgcagatttgtcttccaaggca
acaagcacaccaaagaagaaagccgttgtccaggctaagctgacagccactggccaggtg
acatctccagtgaaaggtgcctcatttgtcaccaataccaatcctcggaaattttctggt
tttgcagccaagcccaacaactctggggaagcccgctcaagccctacccctaaggcaagc
ctgtcctcaagcagatgtgaccctaagcacaaggattgtctgctacgtgagtttcggaag
ttgtgtgccatggtggctgaaaatcctagctacaacacgaagacccagatcatacaggac
ttccttcggaaaggtgcagcaggagatggtttccacggtgacgtgtacctaacagtgaag
ctgctgctgccaggtgttattaagagtgtttacaacttgaacgataagcagattgtgaag
cttttcagccgcatttttaactgcaacccagatgatatggcacgagacctagagcagggt
gacgtgtcagagacgatcagagtcttctttgagcagagcaagtctttccctccagctgcc
aagagcctcctcaccatccaagaggtagatgcgttcctccttcgcctctccaagctcacc
aaggaggatgagcaacagcaggccctgcaggacatcgcgtccaggtgtacagccaatgac
cttaagtgcatcatcagattgatcaaacatgacctgaagatgaactcaggtgcaaaacac
gtgttagatgcccttgaccccaatgcctatgaagccttcaaagcctcacgcaacctgcag
gacgtggtggagcgagtcctccgcaatgagcaggaggtggagaaggagccaggccggaga
cgagctctgagtgtccaggcttcactgatgacgccagtgcagcccatgctggccgaggcc
tgcaagtccatcgaacatgcgatgaagaagtgtcctaacggcatgttctctgagatcaag
tatgacggggagcgagtccaggtgcataagaacggagaccacttcagctacttcagccgc
agcctcaagcccgtcctgcctcacaaggtggcccactttaaggactatatcccccaggct
ttccctgggggccacagcatgatcttggactctgaggtgctcctgattgacactaagaca
ggcaaaccgttgccctttgggactcttggggtgcacaagaaagctgccttccaggatgct
aaagtctgcctgtttgtttttgattgtatctacttcaatgacatcagcttgatggacagg
cctctgtgtgagcggcggaagtttctacatgataacatggttgaaattcccaaccggatc
atgttctcagaaatgaagcaagtcactaaagcttcggacttggccgacatgataaaccgg
gttatccgagaggggttggaagggctggtgctgaaggacgtgaagggtacatatgagcct
ggaaagcggcactggctgaaagtcaagaaagactatttgaacgagggggccatggctgac
acagctgacctggtggtccttggggccttctatgggcaagggagcaaaggtggcatgatg
tccatcttcctcatgggctgctatgacccaggcagccagaagtggtgcacggtcaccaag
tgttcgggaggccacgatgatgcaacgcttgcccgcctgcagaaggaactggacatggtg
aagatcagtaaggatcccagcaagatacccagctggctgaaaatcaacaagatctactac
ccggacttcatagttccagacccaaagaaagctgccgtgtgggagatcacaggggctgag
ttctccaaatctgaggctcacacggccgacggaatctccatccgattccctcgttgcacc
cggatccgtgatgataaggactggaaatctgccactgacctccccaaactcaaggaactg
taccagctgtccaaggagagggcagacttcactgtggcggccggagacgaagggagctcc
actactaggggcagcagcggagagaacgaggttacctcgcggcctgcctccagggcctcc
ccgaagcagccctccaccagtgccaagaaggcaggagggaggcggagcagccccgacagc
cgaggcggtagtaagcccacagcgaagcctccccctgtgagagtgggagagaagcggaag
gctcccgacgagcccccgggccaagcaaaggtgctgctggacatcttcactggggtgcgg
ctctacctgccaccctccacgccagacttcagccgtctcagacgctactttgtggcattc
gatggggacctggtgcaggaatttgacatggcttcggccacgcacgtgctggggagcagg
gacgagaaccctgaggcccagcaggtctccccggagtggatctgggcatgtatccggaaa
cggaggctggtagctccctgctag
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