Phaeodactylum tricornutum: PHATRDRAFT_21592
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Entry
PHATRDRAFT_21592 CDS
T01075
Name
(RefSeq) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti00300
Lysine biosynthesis
pti00470
D-Amino acid metabolism
pti01100
Metabolic pathways
pti01110
Biosynthesis of secondary metabolites
pti01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PHATRDRAFT_21592
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PHATRDRAFT_21592
Enzymes [BR:
pti01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PHATRDRAFT_21592
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-GeneID:
7202547
NCBI-ProteinID:
XP_002181752
JGI:
21592
UniProt:
B7G3A2
Structure
PDB
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All DBs
Position
13:complement(556788..558429)
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AA seq
481 aa
AA seq
DB search
MRMSTAALLCSVYTAGSTAAFAPALLTRRYSSSSSTLSATTNPLQSIFLTPETAKACIDA
AGGTPLYAYSIDKLEEAADACLAFPNAYGLTVRYAMKACPNASILKYFHSKNIHVDASSG
FEVRRAMDAGVPAENISLSTQELPEDFAALVDMGVKLNACSVSQLERFGEHYAGKGAKVG
VRVNPGVGSGGFSASTTGFSKTNVGGPSSSFGIWHELVTDGTVPDIVERYGLEVERIHTH
IGSGSDPEIWQQVATKSLSFCKVFPTVKTMNLGGGYKVGRNKGEVTTDLQKIGKPVADAF
KKFAEKEGRELQMEIEPGTYLVAMAGALVSKVQDKVHTTGENSHTFLKLDAGMTDVLRPS
LYGAVHPITILPGSGNSADVGDETESVVVVGHCCESGDLMTPAPGEPEQLAEQELRAAAV
GDILVMDGSGAYCSGMSTKNYNSFPEAPEVLVDKAGKAHLIRKRQTLSQIYENEISVEGV
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgtctactgctgctctgctctgctcagtttacacagccggaagcactgccgcg
tttgctcccgctttgcttacgcggcgatactcctcgtcatcatcgaccttgtctgctacg
acgaatccgttacagtctatctttttgacgcccgaaactgccaaggcctgcattgatgcc
gccggtgggacacctctgtacgcgtacagtatcgacaagctggaggaagccgccgatgcc
tgtctagcttttcccaacgcgtacggactgacggtacgctacgccatgaaagcctgtccc
aacgcgtccattctcaagtattttcactcgaaaaatattcacgttgacgcatcttccggt
ttcgaagtacgccgggcgatggatgccggtgttccggccgaaaatatctccctgagtacg
caggagttgcccgaagactttgcggcactggttgatatgggtgtcaagctcaatgcttgt
tccgtctcgcagctagagcggttcggtgagcactatgctggaaaaggtgcgaaggtgggc
gtccgagtgaatccgggagtggggtcgggaggcttctccgcgagtaccactggattcagt
aaaactaatgtcggcggaccgagcagttcgttcgggatttggcacgaactcgtcaccgat
ggaaccgtcccagatatcgtggaaaggtacggtttggaagtggaacgtattcatacacat
attggatcaggtagtgatccggagatttggcagcaagttgccaccaaatccttgtccttt
tgcaaggtgtttcccaccgtcaaaaccatgaatcttggtggcggctacaaggtgggacgc
aacaagggcgaagttacgacagatttgcagaaaatcgggaagcctgtggcggatgccttt
aaaaagttcgcggaaaaggaaggccgggaattgcaaatggaaattgagcccggaacttat
ctcgtggccatggctggagcactcgtctccaaggtccaagacaaggttcacaccaccgga
gagaatagccacaccttcttgaagcttgatgccggcatgacggacgtcttgcgcccgagc
ttgtatggtgccgtgcatcctattacgattctgcccgggtcgggaaattctgccgacgtt
ggcgatgaaaccgaatctgtagtggtggttggacattgttgtgaatcaggggacctcatg
actccggccccgggtgagccggaacaactagcggaacaagaacttcgtgcggcagcggta
ggtgatattctagtgatggatggctctggggcgtactgctccggcatgtcgacgaagaac
tacaacagctttcccgaagcaccagaagtgttggtggacaaggcaggcaaggcacacttg
atccgtaaacgacaaaccctgagtcaaatttacgagaacgaaatctccgtagaaggcgtg
ttttaa
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integrated database retrieval system