Phaeodactylum tricornutum: PHATR_52108
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Entry
PHATR_52108 CDS
T01075
Name
(RefSeq) glycosyl hydrolase/mannosidase
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
PHATR_52108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATR_52108
Enzymes [BR:
pti01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
PHATR_52108
Membrane trafficking [BR:
pti04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
PHATR_52108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Motif
Other DBs
NCBI-GeneID:
7204628
NCBI-ProteinID:
XP_002185676
JGI:
52108
UniProt:
B5Y3K7
LinkDB
All DBs
Position
11:280077..283174
Genome browser
AA seq
974 aa
AA seq
DB search
LYVHIVPHTHDDVGWRKTVEQYYYGLNNSIDTRGSVHSIITTAVESLLDDPARTFTYVEM
KFLSIWWKSQSDQMKDNVRYLIANKQLSIVNGGWCMHDEAAPHYIGMIDQTSLGHEFLTR
ELGVIPKVGWQLDPFGHSATQASLMSRGMGFDALYFGRIDYQDLRLRQLTRQCEGLWNAS
RESSDIALPIFWGLTGSYGGNYGAPRGYCFDVLCQDEPLVGANETRLRERLRTFLEDVRI
QSDRTQGDHVMVTMGEDFNYIQAHLNFANMDLLINSIMSYQHWKILDIPSIFGPQYDRVD
IFYSTPDYYTEMKYKETVLWVVKTDDFFPYSDCEHCFWTGYFTSRASFKRFERVSSSFLL
AARQIEALWSGQSNSTGQGMESRPLFALEDALGIAQHHDAVSGTAKQHVADDYSFKLQTG
LDLASKFVAKTLKNTLISDSGLLENLTFCHQLNESICDLSQDATKSLGKDLYVVVYNAKA
SEVSSIIRLPVSTNQTYLVERVERNATVARSRLVETVQAVNLRTTDKPRYTVMFDTGPLP
PIGVALFRVSMTNKVFSSSLRSNDLTETRRLFRAADGKDVVVSNELLSVTFDSSTGMMKQ
VFSQNVSLLLTQEWGYYTSFDSDYDRTEVPSSRADQNSGAYVFRPSTPEEKLKLMNASPS
GAKFVDTSVGTEVHVAFDAPWIRQVTRILKGQPYVEIEYTIGPIPIDDGRGREIVNRYIT
PIKSEGKVYTDSNGREFLERRRNYRPSWSLEVYEQVAGNYYPINAAAYIEDSDAALSVVV
DRSQGGGSIIDGTLEFMVQRRTVADDFRGVDEPLNETCGGMEPYPPYGDAKRVGDGVVIR
GVHRLLVGAKGAGLARSQMDATFAEPLIFVASSPKPSTPVGALVATQSSLSALQLSLPSN
VMLITLMRLQDRERPTWLLRLGHQYAAGEHEVLSQPAKVNLATFLVDWDVSKIEEKTLSG
NRDWDVYTKERYDW
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
ctttacgttcacattgttccacatacgcacgacgatgtgggatggcgtaaaaccgttgag
caatattactacggcctcaacaattccatcgatactagaggtagcgtacactccatcatc
acgaccgccgtggaatcacttttggacgatccagcgcgtacctttacgtacgtggaaatg
aaatttctctccatatggtggaagtctcaaagtgaccaaatgaaagacaacgttcgctac
ctaattgccaacaagcagctatcgattgtcaacggaggttggtgtatgcatgacgaagcg
gcgccccactatatcgggatgattgatcagacaagcttgggacatgaattccttactcgt
gagttaggagtgatacctaaggttggctggcaactcgatcctttcggtcactccgcgacg
caggcatccttgatgtcgcgtggtatgggattcgatgcactatacttcggtaggattgat
tatcaggatttacggctgaggcagttaacacgtcagtgcgagggtttgtggaacgcatca
agagagtcgtcagacatcgcattaccaatcttttgggggctgacgggaagctatggagga
aactatggtgccccgcgaggttattgtttcgacgtattgtgtcaagatgaacctctggtc
ggtgccaacgaaacgagactacgggaacggcttcgtacgtttttggaagatgtgcgtata
cagagtgatcgtacccagggtgatcacgttatggtgacaatgggtgaggactttaactac
atacaagcgcatttaaattttgcaaatatggatctattgataaactcgattatgagctac
cagcattggaagattctggatataccgtctatctttggtccccagtacgatcgagtcgac
atcttctattcaacaccggactactacacagagatgaagtacaaagagacggtcctctgg
gtagtcaaaacggacgacttcttcccgtattctgattgtgagcattgtttctggacaggt
tattttacctctcgtgcatctttcaaacggtttgaacgtgtttcgtcttcttttcttctg
gctgcccgacaaattgaggcattgtggagtggacagagtaacagcacgggtcaaggtatg
gaaagtcgtcccctgtttgcactcgaggatgctttgggtattgcgcagcatcatgatgcc
gtgtctggtacggcaaagcaacacgtagcggatgattacagtttcaaattacaaactggt
ttggatcttgcttccaagtttgtggcaaagacattaaagaatacgctgatatcggactca
gggctgctggaaaacttgactttctgtcaccagttgaatgaatctatttgcgatctttca
caggatgccacgaagtctcttggcaaggatctttatgttgttgtttacaatgcaaaagcc
tcggaggtatccagcattatccgactaccggtctctactaaccaaacgtaccttgttgag
cgtgtggagcgtaacgcaacggtcgcgaggtcgagacttgtggagactgtacaagccgtc
aacctccggactactgacaaaccgaggtataccgttatgtttgacactggtccccttcct
cccattggtgttgctttattccgcgtatctatgacaaataaagtcttctctagttctttg
agatcgaatgatttgacggaaactcgacgtctctttcgagctgccgacggcaaagatgtt
gtagtatcgaatgaacttctctcagtaacctttgacagctctactggaatgatgaaacag
gtattctctcagaatgtgagccttctgcttacgcaggaatgggggtactacacgtctttc
gactcggactatgatagaacggaagtgccctcttcacgtgccgatcaaaattcaggagcc
tatgtgtttagaccaagcactcctgaagaaaagcttaagttgatgaatgcgtcgcctagc
ggtgcaaagttcgtcgatacgtcggtgggaactgaagtacacgtagcatttgatgcgccc
tggattaggcaagtgactcgcatactgaaaggtcagccatacgtggaaatcgagtatacc
atcggtccaattccgatcgatgatgggcgcggaagggagattgtgaatcgatacataact
ccaattaaatccgaaggcaaggtgtacacagactcgaacggtcgcgagtttctggagcga
cgccgcaattaccgtccaagttggtctttggaggtttacgaacaagtggccgggaactac
tacccgatcaacgcagccgcttatattgaagacagcgacgcggctttgtcagtggtcgtg
gatcggtcccaaggtggtggctctattatagatggaacgttggagttcatggtgcagcgt
cggactgtggcggacgactttcggggagtagacgaaccgttgaacgagacgtgtggcggt
atggagccgtatcctccgtacggggacgcaaaacgcgtgggtgacggcgtggtgattcgt
ggcgtccatcggctattggtgggagcaaaaggggctgggttggctagatcccagatggac
gccacgtttgcggagccattaatctttgtggcatcgtcgcccaaaccgtctacaccagta
ggcgcactagtcgctacgcaatcatctctttccgctctgcaattatcgttgccatcaaat
gtaatgttgataacgttgatgcgtcttcaggatcgggagcgaccgacttggctcctgcga
ttgggtcatcagtacgctgcgggtgaacacgaggttctttctcagccggccaaggtaaat
ctcgccacgtttctagtggattgggatgtgtccaagatcgaggaaaagaccctgtcgggc
aatcgggattgggacgtttacacgaaagaacgctacgactgg
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