Paenibacillus tianjinensis: JRJ22_24520
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Entry
JRJ22_24520 CDS
T07842
Name
(GenBank) carbohydrate binding domain-containing protein
Organism
ptj
Paenibacillus tianjinensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_4_9
SLH
Glyco_hydro_16
Shr-like_HID
SKN1_KRE6_Sbg1
Motif
Other DBs
NCBI-ProteinID:
QSF44345
LinkDB
All DBs
Position
complement(5288821..5293878)
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AA seq
1685 aa
AA seq
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MKKNISAALAAVVLVTGLLTPVGSGTVTAAPASNLQQSVAASNMKAFTDVKADHWAARSV
QRWSDTGIIGGYADGTFRPNNQVTKAEFAVIMNRIFNYRAEAAVLPADAAGHLWFSKDIA
KGIAAGYLSADPANLIHPSAMLSRAEAAVALQKIFRLEAAKPDAVYTDLAGAGSELTDAI
TALTAAGYLQGYPGGLFKPGGAISRAELARIVDLMVPGLVTSAGEVSLGTVKGNVVLNST
DILLQDTVIEGNLYLTEGIGEGNVMLQGVQVTGTTFIRGGGEHSVSLDNSKLGKVVVARP
GGNVRIQASGGTAVGTVQLDSGATLEEGKLTGAGFTDVEIRPGAKAVTLKGEFSNASTAD
NRAGSLALSLSGKLGKLILNTPSQVLLAGNARVAELLISANAAGTALLGSGSFGAVTNNA
EGVTSGGRALTKGSSSELKVAAPASSPSPVSGSSSGSGGTAAPTDAPTPAATPTATATPT
PTPTPTATPTAAPTAAPTPTTTPTPTPTSTPTAKPTPAADPWTLVWNDEFNDGVIDPAKW
TYDLGDGSAVGNPGWGNNELEWYTNDEKNVKEADGKLIITARKEAQNGKEYTSSRIKTNG
LFGKKYGKFEIRAKAPTGKGFWPAIWMLPENYEYGNWAASGEIDIMEGWGSRPNTVAGTI
HYGSQWPDNVYSGKEYVFPDNGTIGQYHTYSIEWEPGEIRWYVDGVLYSTKNDWYSLSSG
QPANNAYPAPFNQEFHLLLNLAVGGNFDGNPTEETVFPQSMEIDYVRVYELTGRAYREPV
PVTLAKEPYLEGSLAPLADGNFIHNNGFTEQVEGDAGLGIPNTAHWVLYKEPGADAAVSL
EPLGGANFLKVNISSAGGNSYSIQPQAIVSLAKGRFYKLSFDAKTDATRSMNARLTGGAS
RGYQAYSPGLKAELNGTLGHYEMMFQMKENSDIAARVEFNLGTNSSPVWLGNARLEEIDS
IPFEHDSAKTPLGSGNHLYNGTFDLGETDRLSYWHTAASGGAEVSSSVDDEGRLRLQITG
NGAAGADVRLLQKGIYLVQGQDYKLTFDADVTSARTATIELLGKDGTLYTSKEVQLTEGA
HSITAEFPGLAGATDHEGQFVVRLGGAPGIVRLDNFILLRTSTYFDPSLVYYPLVNGDFS
FGFNSWERLLTEQGGQSAAAVTDGAAKFSITNTGSQNYSVMLFQNGLKVAGGEEYIIEFD
AKSSVARKISVNAENASYKPSFSRIIDVSPDGAHYKFEFRQGVKDTLSLKFLMGKVDGVS
ISGSHDITIDNVKFEIKNAPAKPQELQSDSTNNRVGQPIELTFMDNAAWRSKISAVKVNG
TAVAEGQYTIQPGVITIPAAAFPAEGNYTVTVEARGYVNAAVTQAILANDNNLVVNGSFS
NGRTGWSTWSGEGGAAAFSVDEGVANIAISAAGSQTWANQFFQEGIRLQAGKTYELSFKG
KSTVPRQIIVEYSGTSAASAQARFDITATWATYSAQFTVADGSPLKLNLLIGSSAGDDKT
ANSTPHTLSLDDIAIREVTTGTPVEPASGTLDNGTFDTVKGMAGWTQYFDGTGSAKAMNG
ELAVSLTGTGGAHYSAQVDYAELKLEQGKTYKLTFQARSDIDRLIEVAVEHKGGDYTKYL
PARQVALTDEMSEYSYTFTMDGATDSLAHLVFLMGLIAGNSAETNQAVKAGNQIVIDNVT
LVEIP
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaatatttcggcggcgcttgctgccgtggtcctagtaaccggcctgcttacg
ccggtgggcagcgggaccgttactgcagcgccagcgtcaaatctacagcagtctgttgca
gcaagtaatatgaaagcgtttaccgatgtgaaagcagaccattgggctgcccggtcggtg
cagcgctggagtgacactggcatcatcggagggtacgcagacggcacctttcgtccgaat
aaccaggtgacgaaggcggagttcgctgtcattatgaaccggatctttaattacagggcc
gaggcagctgtgcttcctgccgatgctgcagggcatctctggttcagcaaagatatcgcc
aaaggcatagctgcaggatatttaagcgcggacccggctaacctgattcatccttctgcg
atgctctcgcgtgcggaggcagcggtggcgctgcagaagattttccggctggaagccgct
aaaccggatgcggtttacacggatttggcaggcgccggcagtgagctgaccgatgccatt
acggcacttacggcagccggttatttacaaggctatccagggggcttatttaagccgggt
ggagcgatcagccgcgctgagctggcccggatcgtggatctgatggttcccggtctcgtt
acgtcggcgggagaggtttctttgggaacagtaaaaggcaacgtagtgctgaacagtact
gatattcttttgcaggacacggtaatcgaaggcaatctttaccttaccgaagggattggc
gaaggtaacgtcatgcttcaaggggtgcaggtcacgggtacaaccttcattcgcggaggc
ggagagcatagcgtaagcctggataacagcaagcttggaaaggtagtggtggccagaccc
ggcggcaatgtgcgcattcaggccagcggcgggacagccgtgggaacggtacagctggac
tccggggcaacactggaggaagggaagctgaccggggctggatttacggatgttgaaatc
cgcccaggagccaaggcggtgacattgaagggggagttcagcaatgccagtacagcggat
aaccgagcaggcagcttagcgctaagcctctccggcaagctgggtaagctgattttgaat
accccaagccaggttctgcttgccggcaatgcccgggtcgcagagctgctgatatccgcg
aatgccgcgggcacagcgctgctgggcagcggcagcttcggtgctgtcacgaataatgcc
gagggcgtcacaagcggaggtagagcgctaactaaaggcagcagcagtgagctgaaggtg
gctgcaccagcctccagcccgtctccggtgagcggaagctcctccggctccggcggtaca
gcggccccgacggatgcaccaacaccggcagcgacgccgacagcaacagcaacaccaaca
ccaacaccaacaccaacagctacaccaacagctgcaccaacagctgcaccaacgccaaca
accacgcctacaccaacgccaacgtcaacaccaacagcaaagccaacacctgcggcggat
ccatggacgctggtgtggaatgatgaatttaatgatggtgttatcgatccggcaaagtgg
acttatgatcttggagacggttcggctgtcggcaatcccggctggggcaacaatgagctg
gaatggtacacaaatgacgagaagaatgtaaaagaagcggacggcaagctcattattacc
gcacgcaaagaggcgcagaatggtaaggaatatacatcctcgcggattaagaccaacggg
ctgttcggcaagaagtacggcaaatttgagatccgggcgaaagctccgaccggcaagggc
ttctggccggcgatctggatgctgccggagaattatgagtacggcaactgggccgcatcc
ggcgagatagatattatggaaggctggggcagccgtccgaacaccgttgccggcaccatt
cattacggatcccagtggccggataatgtgtactccggcaaagaatacgtattcccggat
aacggaaccatcggacagtaccacacctattcgattgaatgggagccaggggaaatccgc
tggtatgtggacggtgtgctctactcgaccaaaaatgactggtacagtctcagcagcggc
cagccggctaacaatgcctacccggcaccgttcaaccaggagttccatctcctgctgaat
ctggctgtaggcggcaactttgacggcaatccgacagaggagacggtattcccgcagtcg
atggaaatcgattatgtacgggtatacgagctgacaggcagagcgtaccgtgagccggtg
ccggtaacacttgcgaaggagccttatctggagggctcacttgctccgctggcggacggc
aactttatccataacaatggattcacggagcaggtggagggcgatgccgggttgggtatt
ccgaatacagcgcactgggtgctgtacaaggaaccaggagccgatgcagcagtatcgctc
gaaccgcttggcggagcgaatttcctcaaggtaaacatcagcagcgcaggcggaaattcc
tattcgattcagccgcaggcaatcgtgtcattggctaaaggaagattctacaaactcagc
tttgatgcgaagacggatgccacgcggagcatgaatgcgaggctgaccggcggagcatcc
cgcggctatcaggcgtattcgccgggactcaaggctgagctgaacggaacattgggtcac
tatgaaatgatgttccagatgaaggagaattccgatattgcagcacgggttgaattcaac
ctgggcacgaacagctcgccggtgtggctgggcaatgcccggttagaagagatcgacagc
attccattcgaacatgacagcgccaagacgccgctcggcagcggtaatcacttatacaac
ggcaccttcgacctcggtgagacagaccggctgagctactggcataccgcagcttccggc
ggggcagaggtcagcagcagcgttgacgatgaagggcggctgcgtctgcagatcacgggc
aacggtgctgcaggggcggatgtacggctgctgcagaagggcatttatctggtgcagggc
caggattacaagctgacctttgacgcggatgtcacttccgcgcggacagcaacaatagaa
ctgctcggcaaagatggaacgctctatacctcgaaggaggtgcagcttactgagggggcg
cacagcatcactgccgaattcccgggacttgccggagctacggatcatgaaggacagttc
gttgtgcgcctcggcggcgcgccgggcatcgtacgtctggacaatttcatcctgcttcgc
accagcacctattttgatccgtctctggtctattatccgctggtcaatggagatttcagc
tttggatttaacagctgggaacgcctgttgaccgagcagggcggacagagcgcggcagcc
gtaacggacggggccgctaaatttagcattaccaataccggcagccagaattattcggtc
atgctgttccagaacgggctgaaggtggctggcggagaggaatacatcattgagttcgat
gccaaatccagcgtcgcccgcaagatcagcgtcaacgcggagaatgcgtcttataagcct
tcttttagccggatcattgatgtgtcgccggacggtgcccattacaagttcgaattccgc
cagggtgtgaaggatacgctgtcgctgaaatttctgatgggtaaggtggatggtgtcagc
atttccggatcccatgacatcaccatcgataatgtgaagtttgagatcaagaacgctccc
gctaagccgcaggagctgcagagcgacagtaccaataacagagtcgggcagccgattgag
ctgacattcatggacaatgccgcctggcgcagcaagattagcgcggtcaaggtgaatggc
actgcagtagcagaaggacaatacacgattcagcccggcgtcatcactatccccgcagca
gccttcccggctgaaggcaactacacggtcacagtggaagccaggggttatgtgaatgcg
gctgtcacgcaggccattctggcgaatgacaataatctggtggttaacgggtcgtttagc
aacggccgcaccggctggtccacatggtccggggagggcggggctgctgcatttagtgta
gatgagggtgtggctaatatcgcgatcagcgccgccggcagccagacttgggctaaccag
ttcttccaggaaggcatccggcttcaagccggcaaaacctatgagctgagcttcaagggc
aaatcgacggtaccccggcagattatcgtggaatacagcggaacttctgccgcttctgca
caggcgcggtttgacattacggccacttgggcgacctatagcgcacagtttacagtggcg
gacggcagtccgctgaagctgaatcttctgatcggcagcagcgcgggtgacgataaaacg
gcaaacagcacgccgcatacgctatccttggatgacattgccattagagaggtaactacc
ggtacacctgtggaaccggctagcggcacactggataacggaacctttgatacagtaaaa
gggatggccggctggacgcagtacttcgacggaaccggctccgccaaggccatgaacggg
gaattggctgtcagcctgacgggaaccggcggagcccattacagtgcacaggtggattac
gcggagctgaagcttgaacagggcaagacgtataagctgacgtttcaggcccgctccgac
attgaccggctgatcgaagtggctgtagagcataaaggcggggattacaccaaatatctg
ccagcccggcaggttgcgctgacggacgaaatgagcgaatacagctatacctttactatg
gatggggcaacggattccttggcgcatctggtgtttctcatgggacttatcgcaggcaac
agcgcggaaacgaatcaagcggttaaagcaggcaatcagattgtaattgataacgtaaca
ctcgtagagattccttaa
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integrated database retrieval system
