Purpureocillium takamizusanense: JDV02_003072
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Entry
JDV02_003072 CDS
T08929
Symbol
RLR1
Name
(RefSeq) THO2 plays a role in transcriptional elongation
KO
K12879
THO complex subunit 2
Organism
ptkz
Purpureocillium takamizusanense
Pathway
ptkz03013
Nucleocytoplasmic transport
ptkz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptkz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
JDV02_003072 (RLR1)
09122 Translation
03013 Nucleocytoplasmic transport
JDV02_003072 (RLR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptkz03019
]
JDV02_003072 (RLR1)
03041 Spliceosome [BR:
ptkz03041
]
JDV02_003072 (RLR1)
Messenger RNA biogenesis [BR:
ptkz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
JDV02_003072 (RLR1)
Spliceosome [BR:
ptkz03041
]
Complex C
Other components
EJC/TREX
JDV02_003072 (RLR1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
JDV02_003072 (RLR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
Motif
Other DBs
NCBI-GeneID:
72065032
NCBI-ProteinID:
XP_047840134
LinkDB
All DBs
Position
2:complement(join(4238947..4241392,4241448..4241533,4241583..4242734,4242795..4246352))
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AA seq
2413 aa
AA seq
DB search
MPPKRKRPDRPSGEGGRPSPHRPSESNMGQHDRDDGNNRAGGRPRGGHRGGSFQRRDSNH
GHGRRDSGPGQNAPSGTSNQQTPTPSRSASISTQGRPLSPTATKQQKSSSSPALAKQAAP
SPANAPALKQPAEPDSPSFYYENLTDDRVRAWKERGRQEIIAHGIQSREDVDITEISTLF
QEFIHAVIAGRIDAADAGACVKDILGEQTSDVIKDTYVFAPHSLFLDTLSVVMDNNMDLY
RPTLRDFLIATAVSPALMREVLDAPLLQQLGLIRDTFARLGVRQATNLLYRQANYNLLRE
ESEGYSKLITELFSTNSVPPPPPGKTFEKIKALIGTFDLDVGRTLDVTLDVSAAVLIKQF
KFFVKFLRISSWWPSKRVNDGSPFIGGLPTWAEPDYPHWSTTEDDEERNAQRKLDRDTAF
WDRAREVHLGAFFELGGRRVTEEHLERLISNGNDSGDATAVVERKWMEETKTLPAPGNRV
AAQLLGFKLRFYNSEMRDKTDVLPANLLYLAALLIKIGFLSLTDLYPHLSPDDTEMDKVR
EQEADKLAKEEQASRGGQMNALLMAGVLPQGDDDNPAASSLAKREPAKKAEPDQKKQASE
VDEKNKLPAPLEQKVALLIQLLTIGALPESLFLIGRFPWVTEVCPEVLQRVHRILHVCLS
KVHSECRPLSTMTTDFPTKNVPDIDQTGMPKGSVRLHPQPLKKSWRWPFPDKADTNDNQS
YHFYWDEWSDNVPVCQTVDDVFTLCNTLLNISGVNIGKDEVLLSKLASIGAKSLAEDQSD
SNRSRWQDLIRRLLLPALSHTKANGSVVSAVWDLVRQFPLTTRYSLYAEWFEGQTSRLPA
MKLAFAKSASETRATMKRVSLTNLSEMAKRLAKTSYASPGIVFKVAFEQLEVYSNLIEAF
VECAKYFTDLSYDVLVWSLMNSLGKSRSRTQENHALTTSKWLQALSRFCGKVFRRYPTLD
PIPVLKYVDEQLFHGNSTDLIILKEFVTSMGGIVDAVDFTDDQILGMAGGALLRRQTLIR
AQDKRFENIKSSARLMQALSESKLAARLLINLAQYRQAAIYRVPEDEAHIKYLSSIIDDS
QQTLIQYLDFLWSNLDAQQFDAMVPSLPALIKSFGLSVDVAFMIGRASLAQQMFPWKPSK
AKRETSENAKPAVDKEGDVNMSDAKPQGSATKEQTSTETVDLVEQQKTDDTSLSHTASTA
LQPIVEAIRDTVKPEVWEKVTPELYSTFWALQLGDLCFPEKAYVDERNKLMAEWHAISND
RSDMTRRGLDRKAQRKKELMDTSDDMIAELSGHGLRKAKWKFYLTKQFQASFPSPDAKPE
VIADILLEYCVLPRVRLSPADAEYTYRFIKALHEWNAPVFRYMAFLDRLLNANRLRTLIF
TCTVREAENLGRFLNLILEDLSRWHKNVPLEDDKKDSKGAKDTPRLGPYDKEAKGPSDQP
RLGFALTLNEQGKPETFVEHAQFRDMLFRWHKNINTALKNCLGGSEWMHIRNAITVLKAV
LNHFPAVDFMASQFTTQLQKITKREAAAKESPDSEEGGRVDLSVAAQGAMSQLQQKKGNW
MMVQAFRSNAAPGRQSEADNSPASRLRATAPDFKPNPPKPSTNRANALDEEDGEVRDGRD
SKGQSSTGTPKEVLPSRFQGSNRDSTSRKDEASGPSRSSTPRPGAGAGAGAGQAKPDSRG
HKLPDRPTAHNLPSRPDVPIPTHVPPERFGQSRPHERRDARDTREQRPPRELPREGRETR
EQRDSRDRPIEQDRPVRQPREHPDRRPVEGPSDVRHDLPPRPGQHERERPHREPRVGRLT
ERHDEPSQPAQVPSSNPTPEPAMNPERAALFAQDNSDRGSRRPEPDHARGRAQPPADAME
PVNPGRAALIDDRKSSAQMPPSRLPRDEARDRGPRQPSPGVVRYGVDQGPPRGRHDDRVG
RPFPQDPRGAPGRDPRDRSPVPSGGFRGERPGEREGDGRGPMEPMRDASNFPRAGLRGPD
PEGRLPHQDQNYGRLNPIPSTSDIPSGPRGRGRNFARGGHQGPSGTPGRADGRLTGPETP
RPPSPDRLPPTGPASGRNHRSGFEHGPGPATPSGTPGGPHSDRKRNFGPGPDFQTPTSAN
ATPTSGGVHPDRLAQMGPSVPSHQPPAGPPGHGGHNRYSNASDRPMPGHRGSMGPPPAEG
GVPTGPSSVNDRPRGGSNRRQLVGINNMLQQSQGAPEMGRMSGPRQPRQLLGNSDAQVLT
GGSPATTPGQERQDMGWPESANRGPANGAEGPPRREHRGERDSRTDRPSRSSRRSSRERE
RSPRPPREGEPKEHRDYRDRRSMGGPENMVKERGRDGSGRDTMGLPPPGARDAPIGREAG
YRGHDRSGGARLGDEWATGGSGHRSSGRGGPRDGSNRPPEERREVRDDRGHKRRSEEGVG
NLASEREKRPRRG
NT seq
7242 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaagcgcaagcgacccgaccggccttcgggcgagggcgggcggccatctcca
caccgtccgagcgaatcaaacatgggtcagcacgacagagacgatggcaacaatagagct
ggcgggcggcctcggggcggccaccgtggcggcagctttcagcgacgggattcaaaccat
ggccacggacggagagattctggcccaggccagaacgcgccctctggcacatcaaaccaa
cagacgccaacgccctctcgcagcgcgagcatttccacgcaaggaagacccttgtcgcca
acggcaaccaagcagcagaagtcttcgtcctcgcctgccctagctaagcaggcggcccct
tcgccggcaaatgcgcctgccttgaagcaacctgcggagcccgacagccccagcttttat
tacgagaaccttaccgacgatagagttcgcgcatggaaggaacggggtcggcaggagatc
atcgcacatggcatccaatcgcgggaagatgtggacatcacagagatctctaccctattt
caagagttcatccacgccgtgatcgctggcaggatagatgccgctgatgcaggagcgtgc
gtcaaagacatcctaggagagcaaacgtcggacgtgattaaggatacatacgtgtttgcg
ccacacagcctctttctcgacacgctctcggtcgtcatggacaacaacatggacctctac
cgtccaaccctacgcgattttctcatcgcaaccgccgtttcaccagcattaatgcgggaa
gtactcgacgcaccactcctacagcaacttggtctcatccgggacacatttgccagactg
ggagttcgacaagccacaaacctcttgtaccgccaagccaactataacctccttcgtgag
gagtcagagggctattccaagctcattaccgaactcttttcaaccaacagtgtccccccg
ccgcctcctggcaagacctttgagaaaatcaaggcgctcattggcacattcgaccttgac
gttgggcggacactggatgttaccttggacgtttcggctgcagttctcatcaagcaattc
aagtttttcgtcaaattcttgagaataagctcctggtggccgtccaaacgagtcaacgat
ggctcgcccttcatcggcggcctgcccacatgggcggagcctgactatccgcattggtca
actactgaagatgatgaagaacgaaatgcacagcgtaagctggaccgtgacacagcgttc
tgggatcgcgcgcgtgaggtgcatctgggggcattctttgaactcggtgggagacgagtg
accgaggagcatcttgaacgcctcataagtaacggcaacgatagcggagatgccaccgcc
gttgtcgaacgcaagtggatggaagaaacgaaaactctcccggcgcctggcaaccgtgtc
gctgcacaactgctgggcttcaaactgcgcttctacaactccgagatgcgtgacaagact
gatgttctgcccgcgaatctcctctaccttgccgctcttctcatcaagattgggtttcta
tcattgaccgacttgtaccctcacctgtcacccgacgacactgaaatggacaaagtccgc
gagcaagaggcggacaagctcgccaaggaagaacaggcatcccgcggtggccagatgaat
gcactccttatggctggcgtcctcccccagggggacgatgacaatccggcagcgtccagc
cttgccaagagagagccagccaaaaaggcagaacctgatcagaagaaacaggcatctgaa
gtcgacgagaaaaacaaactgccggccccacttgagcagaaagtggctcttctcattcag
ctcctgacgattggcgctctacctgagtcgctcttcctcatcggccgctttccttgggtt
acggaagtttgcccagaggtcctacagcgcgtgcatcgcatcttgcacgtttgcctgagc
aaggtgcacagtgaatgcaggccactgtccacaatgaccaccgactttcctaccaagaac
gtgcccgacattgaccagacaggcatgccaaagggcagcgtgagactacatccgcaaccc
ctcaagaaatcctggcgctggccgttccctgacaaggccgataccaacgacaatcaaagc
tatcacttctactgggatgaatggtcggacaatgtgcctgtctgtcagacggtggatgat
gtgttcaccctttgcaacacacttctcaacatctctggcgtcaacattggcaaagacgag
gttctgctctctaagcttgccagtattggcgccaaaagcttggccgaggatcaatcggac
tcaaaccgttcccgctggcaagacctcattcgccgtctcttgcttcccgctctcagtcac
accaaggccaacggttcggtggtcagcgcggtatgggacctcgtcaggcagttcccgctc
acaacgcgctactccttgtacgcagaatggttcgagggccaaacatctcgcctgccggcc
atgaaactggcctttgccaagtcagcgtctgagacaagggctacgatgaagcgcgtttcc
ctcaccaacttaagtgagatggcgaagcgcctagccaagacaagctacgcctcccccggc
attgtcttcaaggtcgccttcgaacaattggaagtatactcgaacctgatcgaggcattc
gtggaatgcgccaaatacttcaccgatctgtcctacgacgtgcttgtttggtcgttgatg
aattcgcttgggaaatcccgaagtcgtacgcaggagaaccacgccctcacgactagcaaa
tggctgcaggccttgtcaagattctgcggcaaagtctttcggcggtacccaacactggac
cctatccctgtcctgaaatacgtcgatgaacagcttttccacggcaactccacggatctc
atcatactgaaggagtttgtaacctcgatgggcggcattgtcgacgctgttgattttacc
gacgaccaaattctaggcatggccggcggagctcttctccgccgacagacgctcatccgc
gcccaagacaagcgattcgagaacatcaagagctctgctcgcctcatgcaggcgctctcc
gagtccaagcttgctgctcgcctgctcatcaacctagctcaatatcgacaagcggccatt
taccgggtgcccgaagacgaggctcacatcaaatacctctcctccatcatagatgactca
cagcagaccctcattcaatatctcgacttcctctggagcaatctcgacgcgcaacaattc
gacgcaatggtgccatcattgccggctctcatcaagtcatttggtttgagcgtagatgtt
gcgttcatgatcgggcgagccagcctcgcacagcaaatgttcccttggaaaccctccaaa
gcaaaacgcgagacgagcgagaatgccaagccggccgtcgacaaggaaggagacgtgaac
atgtccgacgccaagcctcagggttcagcaaccaaagagcagacctccacagagacagtg
gatctggtggagcaacaaaagacggatgatacctcgctttcccacacggcgtcaacggcg
ttgcagcccattgtagaggccattcgcgacaccgtcaagcccgaggtctgggaaaaggtg
accccggaactctattcgacgttttgggctttgcagttgggagacctctgctttcctgag
aaggcctacgtggatgagcgcaacaaactcatggcggagtggcatgccatctccaacgat
cgctcggacatgacgcgcagaggcctagatcgaaaagcgcaaagaaaaaaggagctcatg
gacacttccgacgatatgatcgccgagctcagtggccacgggcttcgcaaggccaagtgg
aaattctatctgacaaagcagttccaggcgtccttccctagccccgacgccaagcctgag
gttatcgccgatatcctcctagagtattgtgttctgccacgggtccgcctttcaccagca
gacgcagaatacacatatcggttcattaaggccctgcacgagtggaacgccccggtcttc
agatacatggcattccttgatcgactactcaatgccaatcggctgcgtaccctgattttc
acgtgcactgtgcgtgaagcagagaatttgggccgcttcctgaacctcatcctggaagac
ctgtctcgttggcacaagaatgtccctcttgaggacgacaagaaggacagcaaaggagcc
aaggataccccacgtctcggcccatatgacaaggaggctaaaggccccagcgaccaacct
cgactcggcttcgctctcaccctcaatgagcaggggaagcctgagactttcgtggagcat
gcccaattccgagacatgctgttccgctggcacaagaacattaacacagcgctcaagaac
tgccttggcggctctgagtggatgcacatccgaaacgccatcacggttctgaaggctgtt
ctaaaccacttccctgccgtcgacttcatggcttcccagttcacgacacagttgcaaaag
attacgaagcgagaagctgccgcaaaggaatcccccgacagcgaagaaggtggccgagtc
gacctttccgtcgcagcgcaaggcgctatgtctcagcttcagcaaaagaagggcaactgg
atgatggttcaagctttcagatctaacgccgctcccggacggcaatctgaagccgacaac
tcaccggcatcaagactacgagcaaccgcccccgacttcaagccaaacccgcccaaacct
tctacgaaccgggccaacgccttggatgaagaggacggtgaagtccgggacggtagggac
agcaagggccagtcaagcacaggcacgcctaaggaggtccttccatcgagatttcagggc
tcaaacagagattcaacgtcgaggaaagacgaggcctcaggcccatctcggagctcaacc
cctcgacctggtgctggtgctggtgctggtgctggccaggctaaacctgatagccgaggt
cacaaattgcctgaccgaccaactgcacacaatctcccgagcaggcccgacgtgccaata
ccgacgcacgttcctccagagcgcttcggacagtcaaggccacatgaacgtcgtgatgct
cgagatacgcgtgagcagcgacctcctcgagaactgccgcgagaaggccgagaaactagg
gagcaacgcgacagccgcgatcggcccattgagcaggatcggccggtgagacaaccacgc
gagcatcctgaccgtcgcccagtggagggtccaagcgatgtccgtcacgatctgcctcct
cggcctggacaacacgagcgagagcggccgcatcgagagccccgagtcggccggctcaca
gagcgccatgacgaaccgagtcagccagctcaggtcccttcatccaatccaacaccagag
ccggcgatgaacccggagagggcggcgctgttcgcgcaagacaactcggacaggggatcg
cgccgccctgagcccgatcatgctaggggtcgagcacagcccccagctgacgcgatggag
cccgtgaaccctggacgtgctgcattaatcgatgaccgaaagagcagtgctcaaatgcct
cccagccggctaccgagggatgaggcacgcgataggggccctcggcaaccatctccaggg
gtcgttcgatatggtgtggaccaaggtcctccacgaggacgccacgatgaccgtgtgggc
cggccgtttcctcaagaccctcgcggagctcccgggagagatcctcgcgaccgatcacca
gttcccagcggaggctttcggggtgaacgcccgggcgagcgcgaaggtgatggaagaggt
cccatggaaccgatgcgcgatgcctccaacttcccccgcgcaggacttcgcgggccagac
ccagaagggagactgcctcatcaggaccaaaactacggaagactcaacccgatcccatcg
acatcggacattccctcaggaccgcgcggtcgcggcaggaacttcgcccggggaggccac
cagggcccgtcagggactccaggacgagctgatgggcgccttacagggccagaaacccca
cggccgccttctccggaccgcctccctcccacaggcccggcatctggacgtaaccatcgc
agcggcttcgagcatggaccgggtcccgcgactccttccgggacgccaggcggcccgcat
tctgatcgaaagcgaaactttgggcctgggcccgactttcaaacacccacatcggccaat
gctactcccacgtcagggggtgtacatcctgatcgacttgctcagatgggaccctctgta
ccgtctcaccagccacctgcaggtccacccgggcatggcggccacaatcgatattcgaac
gccagcgatagaccgatgcctggccatcgaggaagcatgggccctccgccagcagagggt
ggcgtgccgactggtccgtcatctgtcaatgaccggcctcgcgggggaagcaacagacgg
cagctggtcggcatcaataacatgctacagcaatctcagggtgcccccgagatgggcaga
atgagcggccctcgccagccgcgacagctacttggtaactcggatgctcaagtccttacg
ggcggctctccagcgaccacgcccggacaagaacggcaagatatgggctggccagagtcg
gcgaatcgtggcccagcaaacggggcggaaggtccgcctagaagggagcatcgtggcgaa
agagacagcagaactgaccgcccgagccgatcatcgagacgaagcagccgggaacgtgag
cgtagcccacgtccgccacgcgaaggtgagccaaaagaacaccgcgactaccgtgataga
cgatcgatgggtgggccagaaaacatggtcaaggagcgtggtagagatggcagtggccgt
gataccatgggcttaccccctcctggagcgagagatgctccaattgggcgggaagcgggc
tatcgcgggcatgatcgctccggcggcgctaggcttggagacgaatgggctacaggcggg
agcggtcatcggagcagcggccgtggaggcccgagagacgggagcaatcgtcctcctgaa
gagcgacgggaggtccgagatgatcgtggccacaaacgccgcagcgaggagggagtgggc
aaccttgcgagcgagcgggagaaacgacccaggcgaggctag
DBGET
integrated database retrieval system
