KEGG   Paramecium tetraurelia: GSPATT00006666001
Entry
GSPATT00006666001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03082  ATP-dependent chromatin remodeling
ptm03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    GSPATT00006666001
   03083 Polycomb repressive complex
    GSPATT00006666001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ptm03036]
    GSPATT00006666001
Enzymes [BR:ptm01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     GSPATT00006666001
Chromosome and associated proteins [BR:ptm03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     GSPATT00006666001
   HDAC complexes
    Sin3A-HDAC complex
     GSPATT00006666001
    BRAF-HDAC complex
     GSPATT00006666001
    REST complex
     GSPATT00006666001
    SHIP complex
     GSPATT00006666001
    MiDAC complex
     GSPATT00006666001
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     GSPATT00006666001
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    GSPATT00006666001
  Chromatin remodeling factors
   NuRD complex
    GSPATT00006666001
SSDB
Motif
Pfam: Hist_deacetyl NIL Importin_rep_6 Peripla_BP_7
Other DBs
NCBI-GeneID: 5020542
NCBI-ProteinID: XP_001434757
Genoscope: GSPATT00006666001
UniProt: A0C993
LinkDB
Position
undetermined
AA seq 417 aa
MNLFKQKVTYYYDEEFGTFNYSTTHPMKPLRVAITDDLVGHYGLKQYMNCIVRCINLVDE
DVLTQFHSEEYINLIKIITPENKCQHEDQLYRFNFMEDCPVLDRLFDFCLCQTSGSVGAA
CVIADQKSNIAINWSGGLHHAKQSEASGFCYVNDCVLGILELLKTYQRVLYIDIDIHHGD
GVEEAFYLTDRVMTCSFHKFKEYFPGTGHIDDIGHDKGKYYAVNFPLNEGLNDDSIQLIF
KPVIDSIMENFRPDVVMLQGGTDSLSGDRLGCFNLSIKGHGSCTEYLKKFNVPIIMVGGG
GYTLRNVPRCWTYETSLALNVPIPDNIPDESDYKIYFGPEYKLHLPISNMEEQNSKEYLE
KNISQRIQNKFEPGCAQIDHYAIGKESRQKIDYQELFSSYNDKREEMQLEQNQDQQE
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgaatcttttcaagtagaaagtgacttattattatgatgaagagtttggcacctttaat
tattcaacaactcaccctatgaaacctttaagagtagctatcacagatgatttagttggt
cattatggattaaaataatatatgaattgtattgtaagatgtattaatttagtcgatgag
gatgtattgacttaatttcattcagaggaatatataaatttaatcaagataattactcct
gaaaataaatgctaacatgaagatcaactttatagattcaattttatggaagattgccca
gttttggataggttatttgatttttgtttgtgtcagacttctggctctgttggagctgct
tgtgtaatcgcagattaaaagagtaatatcgctataaattggagtggtggattacatcat
gcaaaataaagtgaagcaagtggattttgctatgttaatgattgtgtattaggaatatta
gagttattgaaaacatattaaagagtactttacattgatattgatattcatcatggagat
ggagtagaggaagcattttatttaacagacagagttatgacttgttcatttcataaattt
aaggaatactttcctggaactgggcatattgatgatattggccatgacaaaggaaagtat
tatgcagttaatttccccttaaatgaaggcttaaatgatgattccatttaattaatattc
aaacctgttattgatagcattatggaaaattttagaccagatgttgtaatgttgcaagga
ggaactgatagtctcagtggagatcggttgggttgttttaatttaagcatcaaaggccat
ggttcttgcactgaatatctgaaaaaatttaatgtccccatcataatggtaggtggtgga
ggatatacactgagaaatgttccacgttgttggacctatgaaacttccttagccttaaat
gtacccattcctgacaatattccagatgaatctgattataagatctactttggtccagaa
tataaattgcatctgcctatatctaatatggaagagcagaattcaaaggaatatttagag
aaaaatatatcttagagaatttaaaataaattcgagccaggttgtgcataaattgatcat
tatgctattggtaaggagagtagataaaagattgactattaagaattattctcatcatat
aacgataagagagaagaaatgtaattagaataaaactaagactaataagaatga

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