Paramecium tetraurelia: GSPATT00006666001
Help
Entry
GSPATT00006666001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03082
ATP-dependent chromatin remodeling
ptm03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GSPATT00006666001
03083 Polycomb repressive complex
GSPATT00006666001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptm03036
]
GSPATT00006666001
Enzymes [BR:
ptm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
GSPATT00006666001
Chromosome and associated proteins [BR:
ptm03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
GSPATT00006666001
HDAC complexes
Sin3A-HDAC complex
GSPATT00006666001
BRAF-HDAC complex
GSPATT00006666001
REST complex
GSPATT00006666001
SHIP complex
GSPATT00006666001
MiDAC complex
GSPATT00006666001
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
GSPATT00006666001
Heterochromatin formation proteins
Other heterochromatin formation proteins
GSPATT00006666001
Chromatin remodeling factors
NuRD complex
GSPATT00006666001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
NIL
Importin_rep_6
Peripla_BP_7
Motif
Other DBs
NCBI-GeneID:
5020542
NCBI-ProteinID:
XP_001434757
Genoscope:
GSPATT00006666001
UniProt:
A0C993
LinkDB
All DBs
Position
undetermined
AA seq
417 aa
AA seq
DB search
MNLFKQKVTYYYDEEFGTFNYSTTHPMKPLRVAITDDLVGHYGLKQYMNCIVRCINLVDE
DVLTQFHSEEYINLIKIITPENKCQHEDQLYRFNFMEDCPVLDRLFDFCLCQTSGSVGAA
CVIADQKSNIAINWSGGLHHAKQSEASGFCYVNDCVLGILELLKTYQRVLYIDIDIHHGD
GVEEAFYLTDRVMTCSFHKFKEYFPGTGHIDDIGHDKGKYYAVNFPLNEGLNDDSIQLIF
KPVIDSIMENFRPDVVMLQGGTDSLSGDRLGCFNLSIKGHGSCTEYLKKFNVPIIMVGGG
GYTLRNVPRCWTYETSLALNVPIPDNIPDESDYKIYFGPEYKLHLPISNMEEQNSKEYLE
KNISQRIQNKFEPGCAQIDHYAIGKESRQKIDYQELFSSYNDKREEMQLEQNQDQQE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaagtagaaagtgacttattattatgatgaagagtttggcacctttaat
tattcaacaactcaccctatgaaacctttaagagtagctatcacagatgatttagttggt
cattatggattaaaataatatatgaattgtattgtaagatgtattaatttagtcgatgag
gatgtattgacttaatttcattcagaggaatatataaatttaatcaagataattactcct
gaaaataaatgctaacatgaagatcaactttatagattcaattttatggaagattgccca
gttttggataggttatttgatttttgtttgtgtcagacttctggctctgttggagctgct
tgtgtaatcgcagattaaaagagtaatatcgctataaattggagtggtggattacatcat
gcaaaataaagtgaagcaagtggattttgctatgttaatgattgtgtattaggaatatta
gagttattgaaaacatattaaagagtactttacattgatattgatattcatcatggagat
ggagtagaggaagcattttatttaacagacagagttatgacttgttcatttcataaattt
aaggaatactttcctggaactgggcatattgatgatattggccatgacaaaggaaagtat
tatgcagttaatttccccttaaatgaaggcttaaatgatgattccatttaattaatattc
aaacctgttattgatagcattatggaaaattttagaccagatgttgtaatgttgcaagga
ggaactgatagtctcagtggagatcggttgggttgttttaatttaagcatcaaaggccat
ggttcttgcactgaatatctgaaaaaatttaatgtccccatcataatggtaggtggtgga
ggatatacactgagaaatgttccacgttgttggacctatgaaacttccttagccttaaat
gtacccattcctgacaatattccagatgaatctgattataagatctactttggtccagaa
tataaattgcatctgcctatatctaatatggaagagcagaattcaaaggaatatttagag
aaaaatatatcttagagaatttaaaataaattcgagccaggttgtgcataaattgatcat
tatgctattggtaaggagagtagataaaagattgactattaagaattattctcatcatat
aacgataagagagaagaaatgtaattagaataaaactaagactaataagaatga
DBGET
integrated database retrieval system