KEGG   Paramecium tetraurelia: GSPATT00024974001
Entry
GSPATT00024974001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSPATT00024974001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptm03041]
    GSPATT00024974001
Spliceosome [BR:ptm03041]
 Complex A
  U2 snRNP components
   U2 related factors
    GSPATT00024974001
 Complex B
    GSPATT00024974001
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_5 RRM_7
Other DBs
NCBI-GeneID: 5045424
NCBI-ProteinID: XP_001459639
Genoscope: GSPATT00024974001
UniProt: A0EAC5
LinkDB
Position
undetermined
AA seq 402 aa
MDKKKLKKKVDESDSSDLEQLLEISKKYKNRPRPEKQEIPILKKVKPPEPPPQPPQPTTL
PQLSSFKKSESGAYKVPQHLHKNYPHAVRLYLGNLPDNVDKDHLHNYIRQQMESHGAVLD
PGDPVIQVQLQPGQKYCFVQFRSIEETEAALQIDTINYQGKPLKFKRVKDYEISPRIEGE
REVPKIQPKEPAQKLFVCGLAPDTDNDALANILSEYGNLKSLNVVRDIKNVCKGFAFCEF
ETDLETQNCVNGLNNKVIGGRLLQVKKNAQLPTPTQDYIIDTITLGEQSAFEAKLQQINQ
MKVSSVVVINNAVRIKNIEDDYEYNFIVKDLKKEIEKIGRLISMVVPRKKDGYSEGIGKV
FVEFENEQFAKIAIILLQNKKYDGREIDIAFYDPRLYADKQY
NT seq 1209 nt   +upstreamnt  +downstreamnt
atggataaaaagaaattaaaaaagaaggtggacgaatctgacagcagtgatttagaacag
ctgttagagatatccaagaaatacaaaaatcgaccaagaccagaaaaataggaaatccca
atattaaagaaagtgaagcctcctgagcctccacctcaaccacctcagcctacgactctg
ccgcaattgtcatcctttaagaagagtgagagtggagcttataaagtacctcaacatctg
cataaaaactatcctcatgcagttcgactctatttggggaatctgccagataatgtcgat
aaggatcatctccacaattacataagacaatagatggaatctcacggagcagtgcttgat
cccggagatccagtgatacaagtgcaattacagccaggtcagaaatattgtttcgtgtaa
ttcagaagcatcgaagaaacggaagcagcattacaaatagacaccatcaattatcaaggc
aagccactcaaattcaagagagtcaaagattatgaaatcagtccacgtattgagggggaa
agggaagtacccaagattcaacccaaagaacctgcatagaaactctttgtttgtggatta
gcacctgacactgacaatgatgctttggctaacattctgagtgaatatggcaatttgaaa
tcattaaatgttgttagagacataaaaaatgtttgtaagggttttgcattctgcgaattt
gaaactgatttagaaacgcagaattgtgtaaatgggttgaataacaaagtcattggtggc
aggttgttgcaggttaagaagaatgctcaattgccaactccaactcaggattatattatc
gacactattactttgggtgagcaatcagctttcgaagccaaattataatagatcaattaa
atgaaagtgagtagtgtagtggtgattaacaatgcagtcagaatcaaaaatattgaggat
gattatgaatataattttatcgttaaggatttaaaaaaagagattgaaaaaattggcaga
ttgattagtatggtggtgccaaggaagaaggatgggtattcggaaggcataggaaaggtt
tttgttgagtttgagaatgagcaatttgctaagattgctattattctgttgtaaaataaa
aagtatgatgggagagagatagacattgccttttatgatccaaggttgtatgcggataaa
caatattga

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