Planktomarina temperata: RCA23_c03030
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Entry
RCA23_c03030 CDS
T03229
Symbol
icd
Name
(GenBank) isocitrate dehydrogenase Icd
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
ptp
Planktomarina temperata
Pathway
ptp00020
Citrate cycle (TCA cycle)
ptp00480
Glutathione metabolism
ptp01100
Metabolic pathways
ptp01110
Biosynthesis of secondary metabolites
ptp01120
Microbial metabolism in diverse environments
ptp01200
Carbon metabolism
ptp01210
2-Oxocarboxylic acid metabolism
ptp01230
Biosynthesis of amino acids
Module
ptp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ptp_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RCA23_c03030 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RCA23_c03030 (icd)
Enzymes [BR:
ptp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
RCA23_c03030 (icd)
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Motif
Pfam:
IDH
FMN_red
Motif
Other DBs
NCBI-ProteinID:
AII85867
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Position
complement(329382..331571)
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AA seq
729 aa
AA seq
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MTDIIYTKVDEAPELASASFLPILQKFSAAAGVTIGTKDISLAGRILAAFPDYLSEEQRQ
PDDLAELGRLVKTADANVIKLPNISASVPQLVAAVKELQAKGYALPDYPEAPQTDAEKAV
RAKYDALKGSAVNPVLREGNSDRRAAKAVKNFAQNNPHRMGDWSADSKTRVSSMNGNDFF
SNEKSATLPEDTTAKIVLETADGEIILKNDIRYTAGTVVDATFMSAAALKEFLAAEIEST
KSDGTLFSLHLKSTMMKVSDPIIFGHAVKTFLAPVFQAHGSALAELGVNPNFGLGDLLER
VKDNADILADINSCIAARPPMYMVDSDKGISNLHVSSDVIIDASMPALIRAGGKGWGPDG
QESDTNCVIPDNSYAPVYDETIKFFKQNGKLNPATAGTVQNVGLMAQKAEEYGSHPTTFE
VPEAGTVKMILADGTVLHEHTVEAGDIWRSASTKKAPIEDWVNLAISRQKAENCNAIFWL
DADRAHDAELIAYVKPLLDAKGVADKFDIMTPRDATRASLEIITKGKNSIAITGNVLRDY
LTDLFPILELATSAKMLSVVKLMNGGGLFETGAGGSAPKHVQQLNEENHLRWDSLGEFCA
LGESLTFLAEAKNNSKARVLGQAVDAATQSILDESRSPSRKVGEPDNRNSHYWFARYWAN
ALATQNSDAELAAHFAPIAKALTEGEEAILAELAAVQGTAADLGGYYRTDADKTVAVMRP
SATLNAIID
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgactgatattatttatacaaaagttgacgaagcgccggagcttgcctccgcatccttc
ctcccgattctccaaaagttttccgctgcagcgggcgtgaccatcggcaccaaagacatc
agcttggctgggcgcatcctggcggcctttccagattacctcagcgaagagcaacgccaa
cccgatgatctggccgagctgggccgcttggtgaaaacggccgatgccaatgtcatcaaa
ctcccaaatatctccgcatccgtgccgcaactggttgcagccgtgaaggaattacaagcc
aaaggctatgcgttgcctgactatcctgaagcgccgcaaacggacgccgaaaaagccgtc
cgcgcaaaatatgatgccctcaaaggctccgcggtcaatccggttctgcgcgaaggcaat
tctgatcgccgtgcggccaaggccgttaagaacttcgcacaaaacaatccccaccgcatg
ggtgattggtccgccgacagcaagacacgcgtgtcctccatgaacggtaacgatttcttt
tccaatgaaaaatctgccaccctaccggaagataccaccgcaaaaatcgttttggaaact
gccgatggcgaaatcatcctgaaaaatgatatccgctacaccgccggaaccgtggttgac
gccaccttcatgagtgccgcggctctcaaagaatttttagcggcagaaattgagagcaca
aaatctgacggcactttgttctcattgcatctgaaatcgacgatgatgaaggtctccgat
ccaatcattttcggccatgcggtcaaaaccttcctcgccccggttttccaagcccatggc
agcgcgcttgctgagctcggcgtgaaccccaatttcggtttgggtgacttgctcgagcgc
gtcaaagacaatgcggacattctcgccgatatcaacagctgcatcgccgcacgcccgcct
atgtatatggtcgacagcgacaagggcatcagcaatctgcatgtgtcctccgatgtcatc
atcgacgcctccatgcccgcgctgatccgcgcaggcggcaaaggctggggtccagacggg
caggaatcagacaccaattgcgtcattcctgataattcctatgccccagtctacgacgag
accatcaaattctttaaacagaacggcaagttgaacccagctaccgctggcacggtgcaa
aacgttggcctcatggctcaaaaagccgaagaatacggctcacacccgacaacctttgaa
gtgccagaggccggcacggtcaaaatgatcctggccgatggaaccgtattgcacgaacat
accgtcgaagctggtgacatttggcgctcggcctcaaccaagaaagcaccgattgaagat
tgggtaaacctcgcgatttcccggcaaaaagccgagaattgtaacgcgattttctggctt
gacgccgaccgcgcccatgatgcggaattgattgcctatgtcaaaccactcttggacgcc
aagggcgtggcagataagttcgacatcatgacgccacgcgacgccaccagggcatcgctt
gaaatcatcacgaagggcaaaaactccattgccatcaccggcaatgttttgcgcgattac
ctcaccgatctgttcccaatcttggaattggccacatccgcaaaaatgctatcggttgta
aaactgatgaacggtggcggtttgtttgaaactggcgcgggcggctctgcgcccaaacac
gttcaacagctcaacgaggagaaccacctacgttgggacagcctgggcgaattctgcgcc
ttaggcgaaagcttgaccttcctggctgaagcaaaaaacaacagcaaagcccgtgttttg
ggacaagccgttgatgcggccacccagtccattttggacgaaagccgctcgccctcccgc
aaggttggtgagcctgacaaccgcaacagccattattggttcgcgcgctactgggccaat
gcgcttgcgacgcaaaacagtgatgcagagctcgcagcccatttcgcgccgattgcaaaa
gctttgacggagggagaggaggccattttggcggaacttgcagcggttcaaggtacggcg
gcggatcttggcggatattatcggacagatgccgataaaaccgttgcggtgatgcgccct
tctgccacgttaaacgccatcatcgactaa
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