Planktomarina temperata: RCA23_c23570
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Entry
RCA23_c23570 CDS
T03229
Symbol
rbsC2
Name
(GenBank) ribose import ABC transporter, substrate binding protein RbsC
KO
K10439
ribose transport system substrate-binding protein
Organism
ptp
Planktomarina temperata
Pathway
ptp02010
ABC transporters
ptp02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RCA23_c23570 (rbsC2)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RCA23_c23570 (rbsC2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptp02000
]
RCA23_c23570 (rbsC2)
Transporters [BR:
ptp02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RCA23_c23570 (rbsC2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
AII87880
LinkDB
All DBs
Position
complement(2502640..2503752)
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AA seq
370 aa
AA seq
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MVSLTSLKLAPLCVLLCGTVLAPAVSAAEFEASRQGGTPGALLPEELALWSYNTETSAFE
VVSGDASAPYALNLRALPEGSRVGFAEGWAAIPFSYAINQRLYELADELGFEVVYCDNDF
KAEKAVSCAELIALQGADVVIESNWHSGAAAPVMNIFDEAGIPVMSLDVLHPNAIFLGAN
NYVSGLIGGQAAAEHAKALGRCDDVSVLLGIAPADGDAANQRLSGFADGVQTVCGALPEA
RIHEDLIDAGTTDQALTKTTDWLTGHPGAGFVLATAIDDPRAFGMSNALAQAGREGVAIG
LGCDDVGVAATRTPVEDNNFLGCVAYYPEKYPDWALSVAADILEGKAVPQEVHLEHVFLD
AGSINDVYPE
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggtaagcttaacatcgctgaaattggcgccgctgtgcgtcctgctttgcggcacggtt
ctggcccctgccgtatcggcagctgaatttgaagcgagcaggcaaggcggaaccccaggc
gcgcttttgcccgaagaactcgcgctttggtcctataacaccgaaacgagcgcgttcgag
gtggtatcaggggatgcctctgcgccctatgcgctcaacctgcgcgcgctgccagaaggt
tcaagggtaggtttcgccgaaggctgggctgcgatcccgttttcctacgcaatcaatcaa
cggctttacgaactggccgacgaactcgggttcgaggttgtgtattgcgacaacgacttc
aaggctgaaaaggcggtgtcctgcgctgaactgatcgcgctgcagggtgcagatgtcgtg
atcgaatcgaactggcactccggcgcggcggcgcctgtgatgaatatctttgacgaggcg
ggtatacccgtcatgtcccttgacgttctccaccccaatgcgatttttctgggtgccaac
aattacgtcagcgggttgattggcggtcaggcggcggctgaacatgccaaggctctggga
cgctgcgacgatgtctcggttctgcttgggatcgcccccgccgatggtgacgccgcgaat
caacgtttgtcgggctttgccgatggggttcagacggtttgcggtgcgcttcctgaggct
cggattcatgaagatctgattgacgctggcaccacggatcaggctctgaccaagactaca
gactggctgacgggccatcccggtgccggatttgttctggcgactgccattgacgatccg
cgtgcctttggtatgtcgaacgcgctggcacaagccgggcgcgagggcgtggccatcggt
ctcggctgtgacgatgttggcgtggccgcgacacgcacaccggtcgaggacaataatttc
cttggctgtgttgcctactatcccgaaaagtatcccgactgggctttgtcagtcgcggcg
gacattctggaaggcaaggccgtgccgcaggaagttcacctggagcatgtcttccttgat
gcaggaagtatcaatgatgtctacccggaataa
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