Pan troglodytes (chimpanzee): 100610515
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Entry
100610515 CDS
T01005
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04613
Neutrophil extracellular trap formation
ptr05014
Amyotrophic lateral sclerosis
ptr05034
Alcoholism
ptr05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100610515 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100610515 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100610515 (HDAC6)
09165 Substance dependence
05034 Alcoholism
100610515 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptr01009
]
100610515 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
100610515 (HDAC6)
04131 Membrane trafficking [BR:
ptr04131
]
100610515 (HDAC6)
03036 Chromosome and associated proteins [BR:
ptr03036
]
100610515 (HDAC6)
Enzymes [BR:
ptr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100610515 (HDAC6)
Protein phosphatases and associated proteins [BR:
ptr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100610515 (HDAC6)
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100610515 (HDAC6)
Membrane trafficking [BR:
ptr04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100610515 (HDAC6)
Chromosome and associated proteins [BR:
ptr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
100610515 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
100610515
NCBI-ProteinID:
XP_024209112
LinkDB
All DBs
Position
X:48635633..48658808
Genome browser
AA seq
1287 aa
AA seq
DB search
MEKKSLSARVPTGRQKLGGASQGRSLRKGLRPMSGAASTARRRRRREGGGGRPKAARDWL
KTNRGRGQASSTMTSTGQDSTTTRQRRSRQNPQSPPQDSSVTSKRNIKKGAVPRSIPNLA
EVKKKGKMKKLGQAMEEDLIVGLQGMELNLEAEALAGTGLVLDEQLNEFHCLWDDSFPEG
PERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRVLA
DTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMF
NHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLK
ASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDAL
QGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCP
MLESPGAPCRSAQASVSCALEALEPFWEVLVRSTETVERDNMEEDNVEESEEEGPWEPPV
LPILTWPVLQSRTGLVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTP
RPATEAELLTCHSAEYVGHLRATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACR
LVEAVLSGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQAISGHALRILIVDW
DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP
RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG
LASGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLPRPPLSGALASITETIQVHR
RYWRSLRVMKVEDREGPSSSKLVTKKAPQPAKPRLAERMTTREKKVLEAGMGKVTSASFG
EESTPGQTKSETAVVALTQDQPSEAATGGATLAQTISEAAIGGAMLGQTTSEEAVGGATP
DQTTSEETVGGAILDQTTSEDAVGGATLGQTTSEEAVGGATLAQTTSEAAMEGATLDQTT
SEEAPGGTELIQTPLASSTDHQTTPTSPVQGTTPQISPSTLIGSLRTLELGSESQGASES
QAPGEENLLGEAAGGQDMADSMLMQGSRGLTDQAIFYAVTPLPWCPHLVAVCPIPAAGLD
VTQPCGDCGTIQENWVCLSCYQVYCGRYINGHMLQHHGNSGHPLVLSYIDLSAWCYYCQA
YVHHQALLDVKNIAHQNKFGEDMPHPH
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaaagcctgagcgctcgcgtccccacaggtcgccagaaacttggcggagcg
agccaagggcggagtttgagaaaggggctgcgtccaatgagtggagcggcgagtacagcg
cgtcgacggcggaggcgggaagggggcggaggccgaccgaaggcggctagggactggctg
aagacgaaccgcggcaggggccaagcctcctcaactatgacctcaaccggccaggattcc
accacaaccaggcagcgaagaagtaggcagaacccccagtcgccccctcaggactccagt
gtcacttcgaagcgaaatattaaaaagggagccgttccccgctctatccccaatctagcg
gaggtaaagaagaaaggcaaaatgaagaagctcggccaagcaatggaagaagacctaatc
gtgggactgcaagggatggagctgaaccttgaggctgaagcactggctggcactggcttg
gtgttggatgagcagctaaatgaattccattgcctctgggatgacagcttcccggaaggc
cctgagcggctccatgccatcaaggagcaactgatccaggagggcctcctagatcgctgc
gtgtcctttcaggcccggtttgctgaaaaggaagagctgatgttggttcacagcctagaa
tatattgatctgatggaaacaacccagtacatgaatgagggagaactccgtgtcctagca
gacacctacgactcagtttatctgcatccgaactcatactcctgtgcctgcctggcctca
ggctctgtcctcaggctggtggatgcggtcctgggggctgagatccggaatggcatggcc
atcattaggcctcctggacatcacgcccagcacagtcttatggatggctattgcatgttc
aaccacgtggctgtggcagcccgctatgctcaacagaaacaccgcatccggagggtcctt
atcgtagattgggatgtgcaccacggtcaaggaacacagttcaccttcgaccaggacccc
agtgtcctctatttctccatccaccgctacgagcagggtaggttctggccccacctgaag
gcctctaactggtccaccacaggtttcggccaaggccaaggatataccatcaatgtgcct
tggaaccaggtggggatgcgggatgctgactacattgctgctttcctgcacgtcctgctg
ccagtcgccctcgagttccagcctcagctggtcctggtggctgctggatttgatgccctg
caaggggaccccaagggtgagatggccgccactccggcagggttcgcccaactaacccac
ctgctcatgggtctggcaggaggcaagctgatcctgtctctggagggtggctacaacctc
cgcgccctggctgaaggcgtcagtgcttcgctccacacccttctgggagacccttgcccc
atgctggagtcacctggtgccccctgccggagtgcccaggcttcagtttcctgtgctctg
gaagcccttgagcccttctgggaggttcttgtgagatcaactgagaccgtggagagggac
aacatggaggaggacaatgtagaggagagcgaggaggaaggaccctgggagccccctgtg
ctcccaatcctgacatggccagtgctacagtctcgcacagggctggtctatgaccaaaat
atgatgaatcactgcaacttgtgggacagccaccaccctgaggtaccccagcgcatcttg
cggatcatgtgccgtctggaggagctgggccttgccgggcgctgcctcaccctgacaccg
cgccctgccacagaggctgagctgctcacctgtcacagtgctgagtacgtgggtcatctc
cgggccacagagaaaatgaaaacccgggagctgcaccgtgagagttccaactttgactcc
atctatatctgccccagtaccttcgcctgtgcacagcttgccactggcgctgcctgccgc
ctggtggaggctgtgctctcaggagaggttctgaatggtgctgctgtggtgcgtccccca
ggacaccacgcagagcaggatgcagcttgcggtttttgctttttcaactctgtggctgtg
gctgctcgccatgcccaggctatcagtgggcatgccctacggatcctgattgtggattgg
gatgtccaccacggtaatggaactcagcacatgtttgaggatgaccccagtgtgctatat
gtgtccctgcaccgctatgatcatggcaccttcttccccatgggggatgagggtgccagc
agccagatcggccgggctgcgggcacaggcttcaccgtcaacgtggcatggaacgggccc
cgcatgggtgacgctgactacctagctgcctggcatcgcctggtgcttcccattgcctac
gagtttaacccagaactggtgctggtctcagctggctttgatgctgcacggggggacccg
ctggggggctgccaggtgtcacctgagggttatgcccacctcacccacctgctgatgggc
cttgccagtggccgcattatccttatcctagagggtggctataacctgacatccatctca
gagtccatggctgcctgcactcgctccctccttggagacccaccacccctgctgaccctg
ccacggcccccactatcaggggccctggcctcaatcactgagaccatccaagtccatcgc
agatactggcgcagcttacgggtcatgaaggtagaagacagagaaggaccctccagttct
aagttggtcaccaagaaggcaccccaaccagccaaacctaggttagctgagcggatgacc
acacgagaaaagaaggttctggaagcaggcatggggaaagtcacctcggcatcatttggg
gaagagtccactccaggccagactaagtcagagacagctgtggtggccctcactcaggac
cagccctcagaggcagccacagggggagccactctggcccagaccatttctgaggcagcc
attgggggagccatgctgggccagaccacctcagaggaggctgtcgggggagccactccg
gaccagaccacctcagaggagactgtgggaggagccattctggaccagaccacctcagag
gatgctgttgggggagccacgctgggccagactacctcagaggaggctgtaggaggagct
acactggcccagaccacctcggaggcagccatggagggagccacactggaccagactacg
tcagaggaggctccagggggcaccgagctgatccaaactcctctagcctcgagcacagac
caccagaccaccccaacctcacctgtgcagggaactacaccccagatatctcccagtaca
ctgattgggagtctcaggaccttggagctaggcagcgaatctcagggggcctcagaatct
caggccccaggagaggagaacctactaggagaggcagctggaggtcaggacatggctgat
tcgatgctgatgcagggatctaggggcctcactgatcaggccatattttatgctgtgaca
ccactgccctggtgtccccatttggtggcagtatgccccatacctgcagcaggcctagac
gtgacccaaccttgtggggactgtggaacaatccaagagaattgggtgtgtctctcttgc
tatcaggtctactgtggtcgttacatcaatggccacatgctccaacaccatggaaattct
ggacacccgctggtcctcagctacatcgacctgtcagcctggtgttactactgtcaggcc
tatgtccaccaccaggctctcctagatgtgaagaacatcgcccaccagaacaagtttggg
gaggatatgccccacccacactaa
DBGET
integrated database retrieval system
