Pseudomonas tremae: I9H09_02440
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Entry
I9H09_02440 CDS
T08237
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ptre
Pseudomonas tremae
Pathway
ptre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I9H09_02440 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptre03400
]
I9H09_02440 (recD)
Enzymes [BR:
ptre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
I9H09_02440 (recD)
DNA repair and recombination proteins [BR:
ptre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I9H09_02440 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
RecD_N
Helicase_RecD
SH3_13
AAA_22
Viral_helicase1
UvrD-helicase
SLFN-g3_helicase
AAA_16
AAA_17
AAA_28
PhoH
DEAD
T2SSE
AAA_5
nSTAND3
NTPase_1
AAA_18
NACHT
Motif
Other DBs
NCBI-ProteinID:
UQB37283
LinkDB
All DBs
Position
547664..549754
Genome browser
AA seq
696 aa
AA seq
DB search
MNRSFDDLLPATLDDAGLAELSPLTRVDDLLMLLERWVERGWLRALDRAFVAFLSELDPQ
SDPLVLVAAALTSHQLGHGHVCLDLYETLKEPDFALSLPPEGDQQSGTMLPSQLLAALER
AAWCQALARSSLVAEAGDSSAEGLQKPLVLAERRLYLRRYWTYERRIAAALRQRLAQADA
PPGDLPQRLNALFKPASPASDAVIDWQKLACALATRRAFSIITGGPGTGKTTTVVRLLAL
LQAPAVQSGQPLRIRLAAPTGKAAARLTESISQQVQSLDVSDDVRQKIPSEVTTVHRLLG
SRPGTRHFRHHAGNLLPLDVLVVDEASMIDLEMMANLLDALPPHARMVLLGDKDQLASVE
AGAVLGDLCRDAEEGFYSPETQAWLEAVGGEDLSKGALRQGDAQQHPLAQQVVMLRHSRR
FGQGSGIGQLARLVNQQQDQQARALLSAGSHADLFALTLKGEQDLKFERLVLEGLGKGEQ
GPQGYRHYLSVLAAERPVDGAELDDACWTRWARSVLNAFDSFQLLCAVRKGPWGVEGLNQ
RITHALFNASLIESEQQWYEGRPVLMTHNDYGLGLMNGDIGITLRLPERDGEGKQVLRVA
FPRNDGSGGVRFVLPSRLNEVETVYAMTVHKSQGSEFAHTALILPEALNPVLTKELIYTG
ITRAKHWFSLIEPRQGIFEEALRRKVKRLSGLMLGL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgctcgtttgacgatctgttgcctgccaccctggacgacgccggccttgccgaa
ttgagtccgctgactcgtgtggatgaccttctgatgttgctggaacgctgggtcgaacgc
ggctggttgcgcgcgctggaccgggcgttcgtcgcgttcctcagtgagcttgatccccag
tctgatccgctggttttggtcgctgcggcactcaccagccatcaattgggccacggtcat
gtctgccttgatctatacgagaccctgaaagagcctgactttgctctctcgctgccgcct
gaaggtgatcaacaaagcggaacaatgctgccctcgcaattgctcgcagcgctggagaga
gcggcctggtgccaggcgctcgcccgcagctcgctggtggccgaggcaggggactccagc
gccgaggggctgcaaaagccactggtgctggcggagcggcggctatacctgcgccgttac
tggacctatgaacggcgcattgctgcagccttgcgccagcgtctcgcgcaagccgacgct
cctcctggcgatctgccgcagcgtctgaacgcattgttcaagcccgccagccctgcgtcg
gacgctgtcatcgactggcagaagcttgcctgtgcgctggccacccgtcgagcgttcagc
atcatcacgggcggtccaggcactggcaagacgactaccgtggtgcgtttgctggcgttg
cttcaagctcccgccgtgcagagcggccagccattacgcattcgcctggcagcacctacc
ggcaaggcagccgcacgtctgaccgagtccatcagccagcaggtccagagcctggacgtc
agcgacgacgtgcgccagaaaatccccagcgaagtcaccacagttcaccgcctcctcggc
agtcgcccgggcacccggcacttccgtcatcacgcaggcaacctgctgccgctggatgta
ttggtagtcgacgaagcgtccatgatcgacctggaaatgatggccaacctgcttgacgca
ctgccgccgcatgcccgtatggtactgctgggcgacaaggatcagttggcttccgtcgag
gcaggcgccgtgctgggcgatttgtgccgcgacgctgaagagggcttctacagccccgaa
acccaggcctggctggaagccgttggcggcgaagacctcagcaagggcgcgctgcgccaa
ggcgatgcacagcaacatccgttggcccagcaagtggtcatgttgcgtcactcgcgccgg
ttcgggcagggcagcggcattggtcaactggcccggctggtcaaccagcagcaggatcaa
caggcgagggcgttgctgtcggctggcagccacgccgacctgttcgcgctgacgctcaaa
ggcgagcaggacctcaagttcgagcgtctggtgctggaaggccttggcaagggcgagcaa
ggtccgcaggggtatcggcattacctgagcgtgctggccgccgagcgcccggtcgatggc
gctgaactcgacgacgcgtgctggacccgatgggcgcgctcggtgctgaacgcgttcgac
tcattccagctactctgcgctgtccgcaaaggcccttggggcgtggaaggcctgaaccag
cgcatcactcatgcgctgttcaatgccagccttatcgaaagcgagcagcaatggtacgaa
ggtcggccagtgctgatgacccataacgactacggccttggcttgatgaacggcgacatc
ggcatcaccttgcgcttgcccgagcgtgacggcgagggcaaacaggtactgcgcgtcgcc
ttcccgcgcaatgacggcagcggcggcgtgcgctttgtcctgccgagccgcctgaacgaa
gtggaaaccgtctacgccatgaccgtacacaaatcccaaggctcggaattcgctcacact
gctctgatcttgcccgaagcgcttaacccggtactgaccaaggaactgatctacaccggc
atcacccgcgccaaacactggttcagcctgatcgaaccgcgccagggtatcttcgaagaa
gccctgcgccgcaaagtaaaacgcctgagcggcttgatgctcgggctttga
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