KEGG   Pseudomonas triclosanedens: OU419_06560
Entry
OU419_06560       CDS       T09689                                 
Symbol
traD
Name
(GenBank) type IV conjugative transfer system coupling protein TraD
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
ptrl  Pseudomonas triclosanedens
Brite
KEGG Orthology (KO) [BR:ptrl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ptrl02044]
    OU419_06560 (traD)
Secretion system [BR:ptrl02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   OU419_06560 (traD)
Motif
Pfam: TraG-D_C TrwB_AAD_bind DUF87
Other DBs
NCBI-ProteinID: WAI50912
LinkDB
Position
1384871..1387027
AA seq 718 aa
MAQPHAVEVLLRPAVELYTVAVCAGAAVVCVVAPWSLALNPVLGLGSALAFLAFGAIRLR
DAWAILRYRRHIRRLPRYVMTSRDVPVSQYRLFVGRGFRWEQRHTHRLTQTYKPEFRRYA
EPTTFYRLARRLEERLEFAPPPLPRLARALAWDNPLNPVRPLPPVGGMPRLHGIEPHETD
VTLPLGERVGHTLVLGTTRVGKTRLAELFITQDIRRKVHGEHEVVIVFDPKGDADLLKRM
YVEARRAGREGEMYVFHLGWPDISARYNAVGRFGRISEVATRVAGQLSGEGNSAAFREFA
WRFVNIIARALVELGQRPDYLLIQRHVVNIDALFIEYAQHFFARTEPKAWEVIVQLEGRL
NDKTIPRHMVGREKRVVALEQYLSQTRTYDAVLDGLRSAVRYDRTYFDKIVASLLPLLEK
LTTGKIAQLLAPNYSDLSDPRPIFDWMQIIRKRAVVYVGLDALSDAEVAAAVGNSMFSDL
VSVAGHIYKHGIDDGLPGASANAKVAINVHADEFNELMGDEFIPLINKGGGAGMQVTAYT
QTLSDIEARIGNRAKAGQVIGNFNNLFMLRVRETATAELLTRQLPKVEVYTTTLVSGATD
SSDIHGPTDFTSNAQDRISTSSVPLIEPAHVVGLPKGQCFALIEGGNLWKVRMPLPAPDP
DEAMPRDLQQLAGYMRQHYAEAGEWWEGNGLPRSHDDALPADLAEEVQEGTPDEEAPS
NT seq 2157 nt   +upstreamnt  +downstreamnt
atggcccagccgcacgccgtcgaagtcctgctgcggccagcggtggagctatacaccgtt
gccgtatgcgcaggcgccgcggtggtgtgcgtggtggcaccgtggtcgctcgcgttgaat
ccggtactcggcctcggcagcgcgctggccttcctggccttcggcgcgattcgcctgcgc
gacgcctgggccatcctgcggtaccgccgccacatccgtcgtctgcctcgctacgtgatg
acgagccgtgacgtgccagtgagccagtaccgtctgttcgttgggcgtggcttccgctgg
gagcaacgacacacccatcggctgacgcagacctacaagcccgagttccggcgctacgcc
gaaccgacgacgttctaccgcctggcgcgccgcctggaggagcggctggagttcgcgccg
ccgccgctgcctaggctggcgcgggcactggcctgggacaacccgctcaacccggtccgg
cctttgccgccagtgggtggcatgccgcgcctgcatggcatcgagccgcacgagaccgac
gtcaccctgccgctgggcgagcgtgtgggccacaccctggtgctcggtaccacgcgcgtg
ggcaagacgcgcctggccgaactgttcatcacgcaggacatccgccgcaaggtccatggc
gagcacgaggtggtgatcgtcttcgatcccaagggcgatgccgatctgctcaagcgcatg
tatgtcgaggccaggcgagccggacgcgagggcgaaatgtacgtgttccacctgggctgg
cccgacatctcggcacgctacaacgccgtgggccggttcgggcgcatctcggaggtcgcc
acgcgcgttgcggggcagctttccggcgagggcaacagcgccgcgttccgcgagttcgcc
tggcgcttcgtcaacatcatcgcgcgcgccctagtggaactggggcagcggccagactac
ctgctgatccagcgccatgtcgtcaacatcgacgcgctgttcatcgagtacgcccagcac
ttcttcgcccgaaccgagcccaaggcctgggaggtgatcgtccagctcgaaggacgcctc
aacgacaagaccatcccgcgccacatggtcgggcgagaaaagcgggtggtggcactggag
cagtacctgtcgcagacgcgaacctatgacgcggtgctcgacggcctgcgctccgcggtg
cgctacgaccgcacctacttcgacaagatcgtcgcctcgctgttgccgctgctggagaag
ctcaccaccggcaagatcgcgcaactgctcgcgccgaactattccgacctgtccgacccg
cgcccgatcttcgactggatgcagatcatcaggaagcgggccgtggtctatgtgggactg
gatgcgctgtccgacgccgaagtggcggcggccgtcggcaacagcatgttcagcgacctg
gtgtcggtagcggggcacatctacaagcacggcatcgacgatggcttgcctggagcatcg
gccaatgccaaggtcgccatcaatgtccatgcggacgagttcaacgaactgatgggcgat
gagttcatcccgctcatcaacaagggtggcggtgcaggcatgcaggtcacggcctatacg
cagacgctctcggacatcgaggcgcgcatcggcaatcgcgccaaggccggccaggtcatc
ggcaacttcaacaacctgtttatgctgcgggtgcgcgagaccgccaccgccgaactgctg
acacgacaactgccgaaggtggaggtctacaccaccacgctggtcagcggcgccaccgac
agttccgacatccacggtccgaccgacttcaccagcaacgcgcaggaccgcatcagcacg
tcgagcgtgccactcatcgagcctgcgcacgtggtcggcctgcccaaggggcagtgtttc
gccctcatcgaaggcggtaacctgtggaaggtccgcatgccgttgcctgcgcccgatccg
gacgaagccatgccccgggacctgcaacaactggccggctacatgcgccagcactacgcc
gaggcgggggaatggtgggagggcaacgggctgccccggtcgcacgacgacgcgttgcca
gcggatctggccgaggaagtgcaagaaggcacgccggatgaagaggcgccatcgtga

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