KEGG   Paraburkholderia tropica: G5S35_16010
Entry
G5S35_16010       CDS       T07044                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
ptro  Paraburkholderia tropica
Brite
KEGG Orthology (KO) [BR:ptro00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ptro02044]
    G5S35_16010 (tssC)
Secretion system [BR:ptro02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   G5S35_16010 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 StbA_N
Other DBs
NCBI-ProteinID: QNB13168
LinkDB
Position
B:complement(297279..298775)
AA seq 498 aa
MNQQTAAAQSAAIEAEDGSTSSLLDSIVEKSKVAKSDSEHARAKDLIGELVHQVLDGTVV
VSNNLSATIDARVAELDRLISEQLSAVMHAPEFQRLESTWRGLDYLCKESNTGQTIKIKA
LHAPKRDVVRDFKAAVEFDQSALFKKVYEEEFGTFGGAPFGTLIGDYEITRQPEDMYFIE
QMSHVAAAAHAPFIASASPELMGLESFADLGKPRDLGKVFDTVEYAKWKSFRDAEDSRYV
GLTLPRFLGRLPFNPKDGATAEGFNFVEDVDGTDHSKYLWCNAAWAFGARLTAAFDDFGW
CAAIRGVEGGGLVEDLPTHTFKTDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCKNS
DYAAFFAAQSVQKAKKYSTDSANANAVLSAQLQYIFSVSRVAHYLKAMMRDKIGSFASAQ
NVEVFLNRWISQYVLLDDNATQEQKAQFPLREASIQVAEIPGRPGAYRSVAFLRPHFQLD
ELSISLRLVADLPKPANS
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgaatcagcaaaccgcagccgcgcaaagcgcggccatcgaagccgaagacggcagcacg
tcttcactgctcgacagcattgtcgaaaagagcaaggtcgcgaaatcggattcggagcac
gcgcgtgcgaaggacctgatcggcgaactcgtgcatcaggtgctcgacggcaccgtggtc
gtgtcgaacaatctgtccgcgaccatcgacgcgcgcgtggccgaactcgaccgcctgatt
tccgagcaattgagcgcggtgatgcatgcgccggaatttcagcgcctcgaaagcacgtgg
cgcggcctcgattatctgtgcaaggaaagcaataccggccagaccatcaagatcaaggcg
ctgcacgcaccgaagcgcgacgtcgtgcgcgacttcaaagccgcggtcgaattcgaccag
agcgcgctcttcaagaaggtctatgaagaagaattcggcacgttcggcggcgcgcctttc
ggcacgctgatcggcgattacgaaatcacgcgccagcccgaagacatgtacttcatcgaa
cagatgtcgcatgtcgccgcggccgcacacgcgccattcatcgcttcggcttcgccggag
ttgatgggcctcgaatcgtttgccgatctcggcaagccgcgcgatctgggcaaggtgttc
gacaccgtcgaatacgcgaagtggaagtcgttccgcgacgccgaggattcgcgctacgtg
ggtctgacgctgccgcgcttcctgggccgcctgccgttcaatccgaaagacggtgcgacg
gcggaaggcttcaacttcgttgaagacgtggacggcaccgatcacagcaaatacctctgg
tgcaacgcggcgtgggccttcggcgcgcgcctgacggcagcgttcgacgacttcggctgg
tgcgcggcgattcgcggcgtggaaggcggcggtctcgtggaagatctgccgacgcacacc
ttcaagaccgacgacggcgaaatcgcgctcaagtgcccgaccgaaatcgccatcacggac
cgccgcgaaaaggaactgagcgacctcggtttcattccgctcgtccactgcaaaaattcc
gattatgccgcgtttttcgccgcgcaatcggtgcagaaagcgaagaagtacagcaccgat
agcgccaatgcgaatgccgtgctctccgcgcagcttcaatacatcttctcggtatcgcgc
gtggcgcactacctgaaggcgatgatgcgcgacaagatcggcagcttcgcttcggcgcaa
aacgtcgaagtgttcctgaatcgctggatttcgcaatacgtactgctcgacgacaacgcc
acgcaggaacagaaggcacagttcccgctgcgcgaagcgtcgattcaggtcgcggaaatt
ccggggcgtccgggtgcgtatcgttcggtcgcgttcctgcgtccgcacttccagctcgac
gaactgtcgatctcgctgcgtctcgtggcggatctgccgaagccggctaattcgtaa

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